Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_O05
         (593 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    61   7e-10
U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like p...    49   2e-06
U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like pr...    35   0.038
Z92832-5|CAB07374.2|  292|Caenorhabditis elegans Hypothetical pr...    33   0.12 
Z68114-6|CAA92160.1|  316|Caenorhabditis elegans Hypothetical pr...    31   0.62 
U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical pr...    30   1.1  
AL032657-6|CAA21735.3|  139|Caenorhabditis elegans Hypothetical ...    30   1.4  
AF088290-1|AAC98297.1|  139|Caenorhabditis elegans caspase-relat...    30   1.4  
AF088289-1|AAC98296.1|  263|Caenorhabditis elegans caspase-relat...    29   1.9  
AF088288-1|AAC98295.1|  826|Caenorhabditis elegans caspase-relat...    29   1.9  
AC084197-7|AAM44398.1|  826|Caenorhabditis elegans Caspase prote...    29   1.9  
U23139-1|AAK31493.2|  513|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z81047-7|CAB02834.1|  297|Caenorhabditis elegans Hypothetical pr...    28   4.4  
Z68005-4|CAA91992.2|  430|Caenorhabditis elegans Hypothetical pr...    28   5.8  
AC084153-7|AAK84593.1|  451|Caenorhabditis elegans Hypothetical ...    28   5.8  
AL117204-16|CAB55130.1|  389|Caenorhabditis elegans Hypothetical...    27   7.6  
AC024772-5|AAF60539.1|  407|Caenorhabditis elegans Hypothetical ...    27   7.6  
AC024772-4|AAL32240.2|  441|Caenorhabditis elegans Hypothetical ...    27   7.6  

>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 60.9 bits (141), Expect = 7e-10
 Identities = 58/189 (30%), Positives = 82/189 (43%), Gaps = 1/189 (0%)
 Frame = +2

Query: 2   SLISSKYVLTAAHCVTGAILIEGTPKNVRLGEYNTTNNGPDCMKGTKDCAHPVVTAPIEK 181
           SLI   +VLTAAHC   A     T  +VR+G + + +  P          H V    I  
Sbjct: 87  SLIDPNFVLTAAHCF--AKDRRPTSYSVRVGGHRSGSGSP----------HRVTAVSI-- 132

Query: 182 TIPHPDYIPNDVQGRHDIALIRLMVTAPYTDFVRPICLPSLDYTQQPPADFEMYVAGWGM 361
              HP Y        +D A++R+      +   RPICLPSL   +         V GWG 
Sbjct: 133 ---HPWYNIG-FPSSYDFAIMRIHPPVNTSTTARPICLPSLPAVENRLC----VVTGWG- 183

Query: 362 YKQFISGTGLSSTVKQHVKLPYVDRDRCQAAQRTLRGGEALVITKEQLCAGGKPGE-DAC 538
               I G+ LS+   + + +P +    C +    +      +     LCAG   G+ D+C
Sbjct: 184 --STIEGSSLSAPTLREIHVPLLSTLFCSSLPNYI----GRIHLPSMLCAGYSYGKIDSC 237

Query: 539 RGDSGGPLM 565
           +GDSGGPLM
Sbjct: 238 QGDSGGPLM 246


>U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like
           protease protein 2 protein.
          Length = 265

 Score = 49.2 bits (112), Expect = 2e-06
 Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 3/114 (2%)
 Frame = +2

Query: 227 HDIALIRLMVTA-PYTDFVRPICLPSLDYTQQPPADFEMYVAGWGMYKQFISGTGLSSTV 403
           HDIA++ +      + ++ +PICLPS D+   P    +  V+GWG         GL    
Sbjct: 116 HDIAILEIPYPGIEFNEYAQPICLPSKDFVYTPGR--QCVVSGWG-------SMGLRYAE 166

Query: 404 K-QHVKLPYVDRDRCQAAQRTLRGGEALVITKEQLCAGG-KPGEDACRGDSGGP 559
           + Q   +P ++R  C  + +         +++   CAG  + G D+C+GDSGGP
Sbjct: 167 RLQAALIPIINRFDCVNSSQIYSS-----MSRSAFCAGYLEGGIDSCQGDSGGP 215


>U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like
           protease protein 3 protein.
          Length = 313

 Score = 35.1 bits (77), Expect = 0.038
 Identities = 39/139 (28%), Positives = 62/139 (44%), Gaps = 3/139 (2%)
 Frame = +2

Query: 173 IEKTIPHPDYIPNDVQGRHDIALIRLMVTAPYTDFVRPICLPSLDYTQQPPADFEMYVAG 352
           +++   H  Y  N+    +DIAL+R+         ++P+CL   D ++         V G
Sbjct: 107 VKEAYIHSGY--NNQTADNDIALLRISSDLSKLG-IKPVCLVH-DDSKLLKQYKNGVVIG 162

Query: 353 WGM-YKQFISGTG--LSSTVKQHVKLPYVDRDRCQAAQRTLRGGEALVITKEQLCAGGKP 523
           +G+   +  SG    ++S   Q   +P +  D C    R L    ++ IT  Q+CAG   
Sbjct: 163 YGLTLGEDSSGEPKLINSQTLQSTSVPIISDDDCVKTWRFL-SLLSVKITGYQICAGAYL 221

Query: 524 GEDACRGDSGGPLMYEVGN 580
              A  GDSGGPL+    N
Sbjct: 222 HGTA-PGDSGGPLLIHKSN 239


>Z92832-5|CAB07374.2|  292|Caenorhabditis elegans Hypothetical
           protein F31D4.6 protein.
          Length = 292

 Score = 33.5 bits (73), Expect = 0.12
 Identities = 40/158 (25%), Positives = 60/158 (37%), Gaps = 2/158 (1%)
 Frame = +2

Query: 113 NGPDCMKGTKDCAHPVVTAPIEKTIPHPDYIPNDVQGRHDIALIRLMVTAPYTDFVRPIC 292
           N P C K   D  H  V A     +   ++  ++    HD A++ +     +++ VRPIC
Sbjct: 111 NDPRCKKS--DVIHNKVRA----VLVDGEFASSNCLKGHDWAIVEVEKRIHFSENVRPIC 164

Query: 293 L--PSLDYTQQPPADFEMYVAGWGMYKQFISGTGLSSTVKQHVKLPYVDRDRCQAAQRTL 466
           L  P++ YT+       + V GWG  + F     L   +        +DRD  +     L
Sbjct: 165 LPRPNMYYTK------SLAVPGWG--RIFNESGPLIHEIPMR-----IDRDCKRPWSDRL 211

Query: 467 RGGEALVITKEQLCAGGKPGEDACRGDSGGPLMYEVGN 580
                  I    +          C GDSGG L Y   N
Sbjct: 212 PADADDFICATSMNVSNYSAPRTCHGDSGGGLEYRDDN 249


>Z68114-6|CAA92160.1|  316|Caenorhabditis elegans Hypothetical
           protein F17A2.9 protein.
          Length = 316

 Score = 31.1 bits (67), Expect = 0.62
 Identities = 16/59 (27%), Positives = 26/59 (44%)
 Frame = -3

Query: 192 CGIVFSIGAVTTGCAQSLVPFMQSGPLFVVLYSPKRTFFGVPSIKIAPVTQCAAVSTYF 16
           C ++  I +V T C   L       P+ +  Y P R F  + S     ++Q + + TYF
Sbjct: 45  CNLICQIISVATLCLLQLRQVSNLSPMEIWCYGPIRHFSAITSYLFYVLSQISTLMTYF 103


>U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical
           protein C25A8.4 protein.
          Length = 1067

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +2

Query: 107 TNNGPDCMKGTKDCAHPVV-TAPIEKTIPHPDYIPNDVQGRHDIALIR 247
           T   P+ ++    C H V  + PI++   +P Y  +DV+  +DI  IR
Sbjct: 38  TRLSPNLLQNITTCTHLVYGSIPIDRDTGYPQYSVSDVESGYDIDNIR 85


>AL032657-6|CAA21735.3|  139|Caenorhabditis elegans Hypothetical
           protein Y47H9C.6 protein.
          Length = 139

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = -1

Query: 341 TFQNLPGVVAYNPKTVNRWAVQNLYTVLLPSA 246
           +F   PG +++  +T + W +Q LY V++ +A
Sbjct: 56  SFSTSPGFLSFKDETKDTWYIQELYRVIIENA 87


>AF088290-1|AAC98297.1|  139|Caenorhabditis elegans caspase-related
           protein 3 protein.
          Length = 139

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = -1

Query: 341 TFQNLPGVVAYNPKTVNRWAVQNLYTVLLPSA 246
           +F   PG +++  +T + W +Q LY V++ +A
Sbjct: 56  SFSTSPGFLSFKDETKDTWYIQELYRVIIENA 87


>AF088289-1|AAC98296.1|  263|Caenorhabditis elegans caspase-related
           protein 2B protein.
          Length = 263

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -1

Query: 341 TFQNLPGVVAYNPKTVNRWAVQNLYTVLLPSA 246
           +F   PG +++  +T   W +Q LY V++ +A
Sbjct: 185 SFSTSPGFLSFRDETKGTWYIQELYRVIIENA 216


>AF088288-1|AAC98295.1|  826|Caenorhabditis elegans caspase-related
           protein 2A protein.
          Length = 826

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -1

Query: 341 TFQNLPGVVAYNPKTVNRWAVQNLYTVLLPSA 246
           +F   PG +++  +T   W +Q LY V++ +A
Sbjct: 748 SFSTSPGFLSFRDETKGTWYIQELYRVIIENA 779


>AC084197-7|AAM44398.1|  826|Caenorhabditis elegans Caspase protein
           2 protein.
          Length = 826

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -1

Query: 341 TFQNLPGVVAYNPKTVNRWAVQNLYTVLLPSA 246
           +F   PG +++  +T   W +Q LY V++ +A
Sbjct: 748 SFSTSPGFLSFRDETKGTWYIQELYRVIIENA 779


>U23139-1|AAK31493.2|  513|Caenorhabditis elegans Hypothetical
           protein F13H8.5 protein.
          Length = 513

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
 Frame = -3

Query: 576 PTSYMRGPPESPLHASS---PGLPPAHSCSLVITSASPP 469
           P  Y +  P+ PL       P  PP +S ++VI  A PP
Sbjct: 96  PVQYQQQQPQQPLQYQQQPQPAPPPIYSQTVVIPQAPPP 134


>Z81047-7|CAB02834.1|  297|Caenorhabditis elegans Hypothetical
           protein C41G6.9 protein.
          Length = 297

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -2

Query: 286 GPYKICIRCCYHQPNKRNVMSALHIVGDVIWMWNSFF 176
           G Y I ++   H    RN M  LH VG  + ++ SFF
Sbjct: 40  GAYLIIVKTPSHMKCARNSMLCLHCVGAFVDLFFSFF 76


>Z68005-4|CAA91992.2|  430|Caenorhabditis elegans Hypothetical
           protein F59F3.2 protein.
          Length = 430

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2

Query: 506 CAGGKPGEDACRGDSGGP 559
           C  G PGED  RG++G P
Sbjct: 157 CPQGPPGEDGLRGEAGEP 174


>AC084153-7|AAK84593.1|  451|Caenorhabditis elegans Hypothetical
           protein Y22D7AL.4 protein.
          Length = 451

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 17/47 (36%), Positives = 22/47 (46%)
 Frame = -3

Query: 147 QSLVPFMQSGPLFVVLYSPKRTFFGVPSIKIAPVTQCAAVSTYFELM 7
           Q L P   S P   V++SP+ T FG P    AP     A + Y E +
Sbjct: 402 QGLTP-ASSLPYSKVVHSPRPTLFGFPFTGGAPKPSRQAFAAYMEAL 447


>AL117204-16|CAB55130.1|  389|Caenorhabditis elegans Hypothetical
           protein Y116A8C.25 protein.
          Length = 389

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +1

Query: 103 YNKQWSGLHERYQRLCTSRCYCSYRKNYSTSRLHPQ 210
           Y K+   L + Y  +  + CY + RKNY T R+ P+
Sbjct: 294 YRKKEKKLDKIYNNVYNN-CYNNVRKNYCTKRITPK 328


>AC024772-5|AAF60539.1|  407|Caenorhabditis elegans Hypothetical
           protein Y40C5A.4a protein.
          Length = 407

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 3/65 (4%)
 Frame = -3

Query: 198 SGCGIVFSIGAVTTGCAQSLVPFMQSGPLFVVLYSPKRTFFGVPSIKIAPVT---QCAAV 28
           SGC +  SI  +   C Q    +  S  L V+ +   RT F V  I ++  +     A V
Sbjct: 75  SGCDVFISICYIAIMCVQVYTDYFVSFKLLVLWHDYLRTAFTVSHITLSAASFLLMAATV 134

Query: 27  STYFE 13
             Y +
Sbjct: 135 ERYLQ 139


>AC024772-4|AAL32240.2|  441|Caenorhabditis elegans Hypothetical
           protein Y40C5A.4b protein.
          Length = 441

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 3/65 (4%)
 Frame = -3

Query: 198 SGCGIVFSIGAVTTGCAQSLVPFMQSGPLFVVLYSPKRTFFGVPSIKIAPVT---QCAAV 28
           SGC +  SI  +   C Q    +  S  L V+ +   RT F V  I ++  +     A V
Sbjct: 75  SGCDVFISICYIAIMCVQVYTDYFVSFKLLVLWHDYLRTAFTVSHITLSAASFLLMAATV 134

Query: 27  STYFE 13
             Y +
Sbjct: 135 ERYLQ 139


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,209,128
Number of Sequences: 27780
Number of extensions: 405215
Number of successful extensions: 1411
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1407
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)