Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_O03
         (327 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC018935-1|AAH18935.2|  689|Homo sapiens bin3, bicoid-interactin...    29   3.3  
BC000556-1|AAH00556.2|  689|Homo sapiens bin3, bicoid-interactin...    29   3.3  
U03272-1|AAA18950.1| 2911|Homo sapiens fibrillin-2 protein.            28   7.7  
AB209735-1|BAD92972.1| 1976|Homo sapiens fibrillin 2 (congenital...    28   7.7  

>BC018935-1|AAH18935.2|  689|Homo sapiens bin3, bicoid-interacting
           3, homolog (Drosophila) protein.
          Length = 689

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = -1

Query: 165 YRHH*GISAGHDKQRQEFRQFPYCKFYRLHSHSGV*RRLGSRRTCRSDW 19
           + HH   +AG  KQ+++F+   YCK+Y   + S    RL   R  + +W
Sbjct: 396 HHHHPLPAAGFKKQQRKFQYGNYCKYYGYRNPSCEDGRL---RVLKPEW 441


>BC000556-1|AAH00556.2|  689|Homo sapiens bin3, bicoid-interacting
           3, homolog (Drosophila) protein.
          Length = 689

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = -1

Query: 165 YRHH*GISAGHDKQRQEFRQFPYCKFYRLHSHSGV*RRLGSRRTCRSDW 19
           + HH   +AG  KQ+++F+   YCK+Y   + S    RL   R  + +W
Sbjct: 396 HHHHPLPAAGFKKQQRKFQYGNYCKYYGYRNPSCEDGRL---RVLKPEW 441


>U03272-1|AAA18950.1| 2911|Homo sapiens fibrillin-2 protein.
          Length = 2911

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +3

Query: 129  CRDPLKCLNGVCTKVTPRR 185
            C DP+ C+NG+C   TP R
Sbjct: 1535 CADPINCVNGLCVN-TPGR 1552


>AB209735-1|BAD92972.1| 1976|Homo sapiens fibrillin 2 (congenital
           contractural arachnodactyly) variant protein.
          Length = 1976

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +3

Query: 129 CRDPLKCLNGVCTKVTPRR 185
           C DP+ C+NG+C   TP R
Sbjct: 600 CADPINCVNGLCVN-TPGR 617


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,573,670
Number of Sequences: 237096
Number of extensions: 691686
Number of successful extensions: 1661
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1658
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1685725862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)