Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_O02
(508 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC947.08c |||histone promoter control protein Hpc2 |Schizosacc... 31 0.099
SPBC19G7.15 |nup44||nucleoporin Nup44|Schizosaccharomyces pombe|... 30 0.17
SPCC5E4.05c |||serine hydrolase |Schizosaccharomyces pombe|chr 3... 30 0.23
SPCPJ732.01 |vps5||retromer complex subunit Vps5|Schizosaccharom... 27 1.6
SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces pom... 27 1.6
SPBC16H5.02 |pfk1||6-phosphofructokinase |Schizosaccharomyces po... 27 2.1
SPBP23A10.14c |ell1||RNA polymerase II transcription elongation ... 26 2.8
SPAC27D7.11c |||But2 family protein|Schizosaccharomyces pombe|ch... 26 3.7
SPBC16G5.18 |erg24||C-14 sterol reductase Erg24|Schizosaccharomy... 26 3.7
SPBC947.11c |elg1||DNA replication factor C complex subunit Elg1... 26 3.7
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 4.9
SPAC5D6.09c |mug86||acetate transporter |Schizosaccharomyces pom... 25 4.9
SPBC646.10c |||U3 snoRNP protein Nop56 |Schizosaccharomyces pomb... 25 4.9
SPCC4B3.04c |nte1||lysophospholipase|Schizosaccharomyces pombe|c... 25 4.9
SPCC1902.02 |mug72|SPCC663.16c|ketopantoate reductase |Schizosac... 25 6.5
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 25 6.5
SPAC1687.22c |puf3|SPAC222.02c|RNA-binding protein Puf3 |Schizos... 25 6.5
SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C |Schizosacchar... 25 6.5
SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|... 25 8.6
SPBC146.01 |med15|SPBP35G2.15|mediator complex subunit Med15 |Sc... 25 8.6
>SPBC947.08c |||histone promoter control protein Hpc2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 338
Score = 31.1 bits (67), Expect = 0.099
Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 6/82 (7%)
Frame = +2
Query: 266 QAPTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKI-----PTQAPGTVNP- 427
+A TT K T S+VP +T N + + S I P +P TVN
Sbjct: 212 EAKTTKSKEKATKKTSSSVPKQSTGENTKKAVKLETPLTSTPPIPPLSEPKHSPATVNEH 271
Query: 428 VTIPRTTKKPSTIESAPSAIVP 493
++ P PST E PS +P
Sbjct: 272 ISPPSALTNPSTEELKPSTSLP 293
>SPBC19G7.15 |nup44||nucleoporin Nup44|Schizosaccharomyces pombe|chr
2|||Manual
Length = 403
Score = 30.3 bits (65), Expect = 0.17
Identities = 28/83 (33%), Positives = 35/83 (42%)
Frame = +2
Query: 242 NSIFKIPNQAPTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPGTV 421
NSIF Q PTT+ T T + S V N G +T P S PT+
Sbjct: 64 NSIFGKTQQQPTTSFSNTTTNAPQSTVFGQNAASRTGNSNTQPLFSWSTVNNPTKPVDET 123
Query: 422 NPVTIPRTTKKPSTIESAPSAIV 490
N TIP + S I +P+A V
Sbjct: 124 N-ATIPSSLLLSSGI--SPNATV 143
>SPCC5E4.05c |||serine hydrolase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 378
Score = 29.9 bits (64), Expect = 0.23
Identities = 26/80 (32%), Positives = 33/80 (41%), Gaps = 7/80 (8%)
Frame = +2
Query: 287 KPTMTVSAPSAVPT---VNTNGNRGRYDTDPDDINSVFKIPTQA---PGTVNPVTIPRTT 448
KPT T SAPSA PT V ++ D P +P A T T+P T
Sbjct: 292 KPTATTSAPSASPTGVPVEEESHKATSDAVPPAEAKPEPVPASAAERAPTSESTTVPETI 351
Query: 449 KKPST-IESAPSAIVPTVNT 505
+T + S P+ V T T
Sbjct: 352 VASTTKVISEPAPRVTTAAT 371
>SPCPJ732.01 |vps5||retromer complex subunit
Vps5|Schizosaccharomyces pombe|chr 3|||Manual
Length = 576
Score = 27.1 bits (57), Expect = 1.6
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = +2
Query: 257 IPNQAPTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPGTVNPVTI 436
IPN T + SAP+ TV++ ++ + T D + P AP ++ P I
Sbjct: 145 IPNSEQTVDTLDAASSSAPNFTHTVSSASSQKQGSTSLTDTENQKAHPAAAPQSLTPFYI 204
Query: 437 PRTTKKPSTI-ESAPSAIVPTVNT 505
P T+ E S V +V+T
Sbjct: 205 --QVHDPHTVKEITKSHTVYSVST 226
>SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 963
Score = 27.1 bits (57), Expect = 1.6
Identities = 20/77 (25%), Positives = 28/77 (36%), Gaps = 2/77 (2%)
Frame = +2
Query: 272 PTTTKKPTMTVSAPSAVPTVNTNGNRG--RYDTDPDDINSVFKIPTQAPGTVNPVTIPRT 445
P T KPT V + N R + D V K AP + V P +
Sbjct: 132 PKTKSKPTSHAPVSDNVSSTFRNATRKSKKPSASKDTSRGVRKSKAGAPSDPSSVHAPSS 191
Query: 446 TKKPSTIESAPSAIVPT 496
+KP+ PS+ + T
Sbjct: 192 LEKPAGTGDLPSSEIST 208
>SPBC16H5.02 |pfk1||6-phosphofructokinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 942
Score = 26.6 bits (56), Expect = 2.1
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +2
Query: 155 KMYRILAILVLVGSAHAQANANDIDLEEINSIFKI 259
K+YR L I+ LVGS ++ D+ + +S+ +I
Sbjct: 330 KLYRHLTIVGLVGSIDNDMSSTDVTIGAFSSLHRI 364
>SPBP23A10.14c |ell1||RNA polymerase II transcription elongation
factor SpELL|Schizosaccharomyces pombe|chr 2|||Manual
Length = 533
Score = 26.2 bits (55), Expect = 2.8
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 263 NQAPTTTKKPTMTVSAPSAVPTVNTNGNRGR 355
+ +PT T P + VS PSA P + + N +
Sbjct: 164 SSSPTNTPSPNLPVSQPSASPHYSGDKNSAK 194
>SPAC27D7.11c |||But2 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 463
Score = 25.8 bits (54), Expect = 3.7
Identities = 19/77 (24%), Positives = 26/77 (33%)
Frame = +2
Query: 266 QAPTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPGTVNPVTIPRT 445
+A T T +TV+A TNG T + S + N T +T
Sbjct: 206 EATTVTTTTAVTVTATETYTVTATNGGSTITSTGASTVTSTQPSTVTSTQRKNTATTTKT 265
Query: 446 TKKPSTIESAPSAIVPT 496
T SA S + T
Sbjct: 266 TTYVGPSPSASSVVAYT 282
>SPBC16G5.18 |erg24||C-14 sterol reductase Erg24|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 424
Score = 25.8 bits (54), Expect = 3.7
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 5/41 (12%)
Frame = -1
Query: 313 WGTNSH-----GWFLSSCWCLIRYFENAVYFFEVYIIGVCL 206
WG H W ++ WCL F + + +F V GV L
Sbjct: 349 WGMARHINYFGDWIMAWAWCLPAGFGSPIPYFYVAYFGVLL 389
>SPBC947.11c |elg1||DNA replication factor C complex subunit
Elg1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 920
Score = 25.8 bits (54), Expect = 3.7
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +2
Query: 356 YDTDPDDINSVFKIPTQAPGTVNPVTIPRTTKKPSTI 466
Y DPDD+ ++ + A V T P + +P+ I
Sbjct: 809 YKLDPDDVYNILSFLSFANSQVTSYTPPNSIDRPNDI 845
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 25.4 bits (53), Expect = 4.9
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 245 SIFKIPNQAPTTTKKPTMTVSAPSAVPTVNTNG 343
S F+ PN+AP+T + +P+ NTNG
Sbjct: 295 SNFRSPNRAPSTNNRYRGWNGSPTPAAGNNTNG 327
>SPAC5D6.09c |mug86||acetate transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 304
Score = 25.4 bits (53), Expect = 4.9
Identities = 12/54 (22%), Positives = 24/54 (44%)
Frame = -1
Query: 190 DQYQDS*YSVHLSTVCRFFYEIYFKTKTLNSNITDNTFLAVVSLCFLIIFIFFV 29
D D Y++ L +C F + T+ S + + + +CFL++ F+
Sbjct: 180 DDPNDFNYAIGLYLICWFIFTFLVLLCTVRSTLAFFSLFMSLDVCFLLLACAFL 233
>SPBC646.10c |||U3 snoRNP protein Nop56 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 497
Score = 25.4 bits (53), Expect = 4.9
Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +2
Query: 155 KMYRILAILVLVGSAHAQANANDIDLEEINSIFK--IPNQAPTTTKKPTMTV 304
K+ ++ + + +AHA NANDI +N K + P +KK +++
Sbjct: 43 KVVQLRSFIPFKNAAHALENANDISEGVLNDFLKNFLELNLPKASKKKKVSL 94
>SPCC4B3.04c |nte1||lysophospholipase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1316
Score = 25.4 bits (53), Expect = 4.9
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -1
Query: 151 TVCRFFYEIYFKTKTLNSNITDNTFLAVVSLCFLIIFI 38
TV ++ Y+I + T+ N FL VS+C +I+ +
Sbjct: 45 TVPKWAYKIVTYSLTIQFNFKSLLFLFFVSICVVILVV 82
>SPCC1902.02 |mug72|SPCC663.16c|ketopantoate reductase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 574
Score = 25.0 bits (52), Expect = 6.5
Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Frame = +2
Query: 242 NSIFKIPNQAPTTTKKPTMTVSAPSAV-PTVNTNGNRGRYDTDPDDINSVFKIPTQAPGT 418
NSI+KIP+ + P +T +PS + PT + GR +P +N + +
Sbjct: 403 NSIYKIPSASMVNLSSPLVT--SPSGLNPTGRPSRFGGRVRGNPLTMNKAGSVSDLLSTS 460
Query: 419 VNPVTIPRTTKKPSTIESAPSAIVP 493
N + + +++ PSA+ P
Sbjct: 461 TNMAS--SDALETASMIGVPSAMPP 483
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 25.0 bits (52), Expect = 6.5
Identities = 23/80 (28%), Positives = 26/80 (32%)
Frame = +2
Query: 260 PNQAPTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPGTVNPVTIP 439
P Q K P S PSAVP + P S P P
Sbjct: 174 PAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPPAGHAPNVTS 233
Query: 440 RTTKKPSTIESAPSAIVPTV 499
+ K P+ S PSA VP V
Sbjct: 234 ESPKFPNRGPSIPSASVPPV 253
>SPAC1687.22c |puf3|SPAC222.02c|RNA-binding protein Puf3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 732
Score = 25.0 bits (52), Expect = 6.5
Identities = 20/77 (25%), Positives = 27/77 (35%)
Frame = +2
Query: 278 TTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPGTVNPVTIPRTTKKP 457
T K + + S PTV+ G R + K T V P TIP +
Sbjct: 294 TLKNDSSFFGSASVRPTVSPIGTSFRQSLPDISAFGIPKTETNPSEVVAPGTIPISVLPT 353
Query: 458 STIESAPSAIVPTVNTN 508
S +A A +N N
Sbjct: 354 SNFSAATPANPSLINQN 370
>SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 988
Score = 25.0 bits (52), Expect = 6.5
Identities = 11/51 (21%), Positives = 22/51 (43%)
Frame = +2
Query: 344 NRGRYDTDPDDINSVFKIPTQAPGTVNPVTIPRTTKKPSTIESAPSAIVPT 496
++ +DT P + +N +P+T +K ++ PS+ PT
Sbjct: 574 SQNTFDTLPTISQGLLAATQPVTSVLNTSPLPKTPEKDRSLNVTPSSSTPT 624
>SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 743
Score = 24.6 bits (51), Expect = 8.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 410 PGTVNPVTIPRTTKKPSTIESAPSAIVPTVNT 505
P +P+ + R+ +KPS+ S PTVNT
Sbjct: 598 PNASSPLDV-RSKQKPSSANSNAPTPAPTVNT 628
>SPBC146.01 |med15|SPBP35G2.15|mediator complex subunit Med15
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1063
Score = 24.6 bits (51), Expect = 8.6
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +2
Query: 260 PNQAPTTTKKPTMTVSAPSAVPTVN-TNGNR 349
P P+T ++ +AP P VN TN NR
Sbjct: 315 PQDQPSTQQQQPQRTAAPPNNPNVNATNNNR 345
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,985,380
Number of Sequences: 5004
Number of extensions: 41436
Number of successful extensions: 157
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 157
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 202220600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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