Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_O02
(508 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1655 + 38940790-38940864,38941245-38942057,38942149-389422... 30 0.93
02_03_0132 - 15584673-15584789,15584957-15585054,15585151-15585550 29 1.6
12_02_0330 - 17612867-17613161,17613376-17613459,17613554-176137... 29 2.1
12_02_0228 + 15903452-15903812,15904153-15904202,15904615-159047... 29 2.1
04_04_0962 + 29728983-29729034,29729622-29731369,29731656-297317... 29 2.1
04_01_0121 + 1253201-1253584 29 2.1
03_06_0726 - 35761959-35762063,35762232-35762336,35762543-357626... 29 2.8
07_03_0943 - 22778877-22780970,22781376-22781480,22781481-227820... 28 3.7
05_03_0027 + 7471834-7471984,7472359-7472423,7472811-7472828 28 3.7
04_04_1125 + 31085106-31085714 28 5.0
04_01_0113 + 1188285-1188420,1189245-1189795 27 6.5
11_03_0212 - 11761856-11762037,11762302-11762398,11763571-117645... 27 8.7
09_06_0059 - 20584196-20584288,20584389-20585055,20585411-205857... 27 8.7
08_02_1508 + 27602104-27602265,27602398-27602449,27603357-276047... 27 8.7
07_03_1115 - 24076506-24076677,24077169-24077266,24077622-240777... 27 8.7
05_01_0192 + 1394342-1396645 27 8.7
02_05_0044 - 25375239-25376233,25377233-25377364,25377586-25378504 27 8.7
>01_06_1655 +
38940790-38940864,38941245-38942057,38942149-38942268,
38942883-38943566
Length = 563
Score = 30.3 bits (65), Expect = 0.93
Identities = 15/54 (27%), Positives = 22/54 (40%)
Frame = +2
Query: 251 FKIPNQAPTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAP 412
++I P T P S P+ P V+ + R D D D V +P +P
Sbjct: 101 YQITPAKPATVTAPAAAASLPAPPPPVSARERQRRRDVDDDKPAIVLPLPPPSP 154
>02_03_0132 - 15584673-15584789,15584957-15585054,15585151-15585550
Length = 204
Score = 29.5 bits (63), Expect = 1.6
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Frame = +2
Query: 308 APSAVPTVNTNGNRGRYDTDPDDINSVFKI-PTQAP--GTVNPVTIPRTTKKPSTIESAP 478
+P P + GN + T P ++ P+++P G P T PRT PS AP
Sbjct: 8 SPPPPPMIGRAGNLTVFITPPSPASTPRSSRPSESPRSGFSTPATAPRTAASPSPPSPAP 67
Query: 479 S 481
S
Sbjct: 68 S 68
>12_02_0330 -
17612867-17613161,17613376-17613459,17613554-17613744,
17614085-17614995,17615081-17615252,17615337-17615412,
17615515-17615634,17615841-17616005,17616096-17616186,
17616644-17616785,17616848-17617042,17617132-17617185,
17617299-17617397,17618181-17618296,17618376-17618442
Length = 925
Score = 29.1 bits (62), Expect = 2.1
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +2
Query: 368 PDDINSVFKIPTQAPGTVNPVTIPRTTK-KPSTIESAP 478
PD ++ P +P VNP+ PRT + +P+ + S+P
Sbjct: 387 PDRVSPWQIEPANSPSPVNPLPAPRTKRARPNVLASSP 424
>12_02_0228 + 15903452-15903812,15904153-15904202,15904615-15904713,
15907146-15907415,15908045-15908125,15909033-15909599,
15909677-15910053,15910326-15911613
Length = 1030
Score = 29.1 bits (62), Expect = 2.1
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = +2
Query: 257 IPNQAPTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDIN--SVFKIPTQAPGTVNPV 430
IPN +PTT T + + + T NG + D +P + S F +P+ +P T
Sbjct: 917 IPNASPTTPLFGTPSPTVGLSTGTDQMNGGQMAGDKNPFAFSAASPFGLPSSSPSTPTLF 976
Query: 431 TIPRTTKKPSTIES 472
+ P T +T S
Sbjct: 977 STPATQFASATSAS 990
>04_04_0962 +
29728983-29729034,29729622-29731369,29731656-29731742,
29732035-29732199,29732437-29732526,29732863-29733027,
29733124-29733418,29733550-29733764,29733879-29733947,
29734107-29734184,29734466-29734529,29734658-29734897,
29734985-29735124
Length = 1135
Score = 29.1 bits (62), Expect = 2.1
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 203 AQANANDIDLEEINSIFKIPNQAPTTTK--KPTM 298
++A AN I +E I K+P++APT T+ KP M
Sbjct: 892 SRAEANMISVERILQYTKLPSEAPTITEGSKPPM 925
>04_01_0121 + 1253201-1253584
Length = 127
Score = 29.1 bits (62), Expect = 2.1
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 275 TTTKKPTMTVSAPS-AVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPGTVNPVTIP 439
TT K+ ++ PS A+P + T R T+ D +N+V+K Q P V P
Sbjct: 33 TTVKESIADLNLPSIAIPNLRTFQAMTRSVTNVDQVNAVYKAFLQPPTGVEMAVDP 88
>03_06_0726 -
35761959-35762063,35762232-35762336,35762543-35762665,
35763056-35763316,35763449-35763905,35764637-35764755,
35764851-35764919
Length = 412
Score = 28.7 bits (61), Expect = 2.8
Identities = 21/92 (22%), Positives = 33/92 (35%), Gaps = 5/92 (5%)
Frame = +2
Query: 212 NANDIDLEEINSIFKIPNQAPTTTKKPTMTVSAPSAVPTVNTNGNRG-----RYDTDPDD 376
N N ++ + K P Q P PT S ++ G G + T P +
Sbjct: 159 NTNGKQEPDVTNSQKAPTQTPKAPTHPTFATSVKKSIGAKKIGGKTGGLGVKKLTTKPSE 218
Query: 377 INSVFKIPTQAPGTVNPVTIPRTTKKPSTIES 472
S++ + P PV TTK ++ S
Sbjct: 219 --SLYDQKPEEPKPAAPVMTTSTTKSGPSLHS 248
>07_03_0943 -
22778877-22780970,22781376-22781480,22781481-22782059,
22782149-22782187,22782340-22782372
Length = 949
Score = 28.3 bits (60), Expect = 3.7
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Frame = +2
Query: 287 KPTMTVSAPSAVPTVNTNGNR-----GRYDTDPDDINSVFKIPTQAPGTVNPVTIPRTTK 451
KP + S P++ T+N + + +Y+ P D V K +Q ++ + IP+
Sbjct: 677 KPFIWGSIPNSSTTINFDMSNIHLCHKQYNVPPTDEKMVLKEKSQDKHVID-LNIPQV-- 733
Query: 452 KPSTIESAPSAIVPTVNTN 508
PS ESA S IVP+ + N
Sbjct: 734 -PSDYESAVSYIVPSSDKN 751
>05_03_0027 + 7471834-7471984,7472359-7472423,7472811-7472828
Length = 77
Score = 28.3 bits (60), Expect = 3.7
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -1
Query: 478 WGTFNGAWFLSSSGDGYRIDCSRSLRRYFENTVYIIG 368
W FNG +L S + CSR++ YF++ Y++G
Sbjct: 43 WDDFNGPNYLFSGECSMLMSCSRAV--YFKDARYLLG 77
>04_04_1125 + 31085106-31085714
Length = 202
Score = 27.9 bits (59), Expect = 5.0
Identities = 24/77 (31%), Positives = 29/77 (37%), Gaps = 1/77 (1%)
Frame = +2
Query: 278 TTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPGTVNPVTIPRTTKKP 457
TTK P P PT T T P + PT P T P T P T P
Sbjct: 36 TTKPPPPPCQPPPPTPTPATPTTPPTPWTPPPATPTP---PTPTPWTPTPATPPPTPATP 92
Query: 458 STIESAPS-AIVPTVNT 505
+T + P+ A P+ T
Sbjct: 93 ATPTTPPTPAPAPSTPT 109
>04_01_0113 + 1188285-1188420,1189245-1189795
Length = 228
Score = 27.5 bits (58), Expect = 6.5
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +2
Query: 278 TTKKPTMT-VSAPS-AVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPGTVNPVTIP 439
TT K ++T ++ PS A+P + T R T+ +N+V+K QAP V P
Sbjct: 112 TTAKGSLTDLNLPSIAIPNLRTFQAMTRTVTNVGQVNAVYKAFFQAPAGVEMAVEP 167
>11_03_0212 -
11761856-11762037,11762302-11762398,11763571-11764545,
11766172-11766263,11766450-11766510
Length = 468
Score = 27.1 bits (57), Expect = 8.7
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = +2
Query: 320 VPTVNTNGNRGRYDTDP-DDINSVFKIPTQAPGT 418
+PT N +G + T P D + F IP P T
Sbjct: 137 IPTANNEQQKGNFITTPKDKVAKSFDIPNNFPNT 170
>09_06_0059 -
20584196-20584288,20584389-20585055,20585411-20585732,
20585862-20586000,20586261-20586322,20586371-20586434,
20586674-20586826,20586952-20587082,20587175-20587336,
20588060-20588264
Length = 665
Score = 27.1 bits (57), Expect = 8.7
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +2
Query: 164 RILAILVLVGSAHA-QANANDIDLEEINSIFKIPNQAPTTTKKPTMTVSAPSAVP 325
R + + G A A +A IDLE N K P+Q T +P + V P VP
Sbjct: 417 RTASSTINAGDAQACSTSATHIDLENKNGDSKTPSQDKRETNQPPIRV-VPFPVP 470
>08_02_1508 +
27602104-27602265,27602398-27602449,27603357-27604757,
27604833-27606140,27606594-27607435
Length = 1254
Score = 27.1 bits (57), Expect = 8.7
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 263 NQAPTTTKKPTMTVSAPSAVPTV 331
++APTT K+P+ T PS P +
Sbjct: 314 SRAPTTQKQPSSTFFTPSTTPKI 336
>07_03_1115 -
24076506-24076677,24077169-24077266,24077622-24077743,
24079059-24079235,24079809-24079897,24079919-24079965,
24080423-24080519,24080600-24080682,24080716-24080796,
24081043-24081199,24081323-24081750,24081985-24082014,
24083180-24083300,24083432-24083697
Length = 655
Score = 27.1 bits (57), Expect = 8.7
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Frame = +1
Query: 196 CSRPGKRQ*YRPRRNKQH---FQNTESSTNNY*ETNHDC*CPISCSDCKYQR 342
C + G Q P + H FQ SST + + N DC C S C Y+R
Sbjct: 122 CEQCGNHQSESPNIIEAHDPRFQPDLSSTYSPVKCNVDCTCDNERSQCTYER 173
>05_01_0192 + 1394342-1396645
Length = 767
Score = 27.1 bits (57), Expect = 8.7
Identities = 22/87 (25%), Positives = 33/87 (37%), Gaps = 2/87 (2%)
Frame = +2
Query: 251 FKIPNQAPTTTKKPTMTVSAPSAVPTVNTNGNRGRYDTDPDDINSVFKIPTQAPG--TVN 424
F P + ++ KP+ ++ PS+ P + P +N + P Q PG T
Sbjct: 244 FSTPTSSSSSPSKPSPRMATPSSPPPEAPVSSAA---PPPASLNPMLPSPPQLPGVSTTT 300
Query: 425 PVTIPRTTKKPSTIESAPSAIVPTVNT 505
P T P T S A P +T
Sbjct: 301 PSPPASTVSMPPT-NSVAVASAPANST 326
>02_05_0044 - 25375239-25376233,25377233-25377364,25377586-25378504
Length = 681
Score = 27.1 bits (57), Expect = 8.7
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -1
Query: 442 SGDGYRIDCSRSLRRYFENTVYIIGVCIIASSITV 338
S GY +C+ RY + YI+G C + ITV
Sbjct: 280 SSGGYTCECTN---RYLQGNPYILGGCNMQDHITV 311
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,221,889
Number of Sequences: 37544
Number of extensions: 234933
Number of successful extensions: 752
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 751
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1083123860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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