Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_N21
(328 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC22F8.06 |pam1||20S proteasome component beta 6|Schizosacchar... 25 2.9
SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic... 25 3.8
SPAC23G3.12c |||serine protease |Schizosaccharomyces pombe|chr 1... 24 5.1
SPBC15D4.09c |||cystathionine gamma-synthase |Schizosaccharomyce... 24 6.7
SPBC776.08c |||Nrap|Schizosaccharomyces pombe|chr 2|||Manual 24 6.7
SPBC20F10.02c |||DUF1741 family protein|Schizosaccharomyces pomb... 23 8.8
SPAC29B12.14c |||purine transporter |Schizosaccharomyces pombe|c... 23 8.8
SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr... 23 8.8
SPCC622.16c |epe1||Jmjc domain chromatin associated protein Epe1... 23 8.8
SPAC23H3.07c |mrp2||mitochondrial ribosomal protein subunit S14|... 23 8.8
SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit |Schiz... 23 8.8
>SPAC22F8.06 |pam1||20S proteasome component beta
6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 225
Score = 25.0 bits (52), Expect = 2.9
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +2
Query: 122 YPYWMTDEVYGLNKERQGEILMY 190
+PY++ V G++KE +GEI +
Sbjct: 106 FPYYVYTTVAGIDKEGKGEIYSF 128
>SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic
subunit Bgs1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1729
Score = 24.6 bits (51), Expect = 3.8
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 20 WRKGVRRSLSEDDKYSYFTED 82
WR+ R L EDD SY ++D
Sbjct: 5 WREQEGRGLFEDDANSYVSDD 25
>SPAC23G3.12c |||serine protease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 996
Score = 24.2 bits (50), Expect = 5.1
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +2
Query: 161 KERQGEILMYANSQLLARL 217
K ++G+IL+Y NS +L L
Sbjct: 317 KLKEGDILLYVNSMILINL 335
>SPBC15D4.09c |||cystathionine gamma-synthase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 610
Score = 23.8 bits (49), Expect = 6.7
Identities = 8/29 (27%), Positives = 18/29 (62%)
Frame = +2
Query: 5 MVVIDWRKGVRRSLSEDDKYSYFTEDVDL 91
+++ D KG+R+ L D+ +TE++ +
Sbjct: 114 VIIYDATKGLRKHLDSIDRNRKYTEEIHI 142
>SPBC776.08c |||Nrap|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1097
Score = 23.8 bits (49), Expect = 6.7
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = -3
Query: 182 VSLLDALCSNRTLRQSSNTDNSYEGNTC 99
+S+ + L ++ +LR SS++ YE +TC
Sbjct: 661 LSIAEILPADESLRYSSSSVPFYESSTC 688
>SPBC20F10.02c |||DUF1741 family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 600
Score = 23.4 bits (48), Expect = 8.8
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +2
Query: 266 WNEPVKNGYW 295
WNEP+ N +W
Sbjct: 25 WNEPINNIFW 34
>SPAC29B12.14c |||purine transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 581
Score = 23.4 bits (48), Expect = 8.8
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 101 MYYLHMNYPYWMTDEVYGLN 160
+Y ++ N PYW T YG+N
Sbjct: 440 LYTINPNEPYWFT---YGIN 456
>SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1517
Score = 23.4 bits (48), Expect = 8.8
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +2
Query: 35 RRSLSEDDKYSYFTEDVDLNTYMYYLHMNYPYWMTDEVYGLNKERQGEI 181
R +L+ D F D LN + N +W T+E G + +++ E+
Sbjct: 270 RLALTTDANLKAFQRD--LNAKKLHWPKNVEWWKTNEFGGFHLKKKAEM 316
>SPCC622.16c |epe1||Jmjc domain chromatin associated protein
Epe1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 948
Score = 23.4 bits (48), Expect = 8.8
Identities = 11/20 (55%), Positives = 14/20 (70%), Gaps = 4/20 (20%)
Frame = +2
Query: 245 CDIXMFMWNEPVK----NGY 292
CDI + ++NEPVK NGY
Sbjct: 482 CDIIIDIYNEPVKISKNNGY 501
>SPAC23H3.07c |mrp2||mitochondrial ribosomal protein subunit
S14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 105
Score = 23.4 bits (48), Expect = 8.8
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2
Query: 164 ERQGEILMYANSQLLARLRME 226
ERQ + +Y N +L R+R+E
Sbjct: 27 ERQSNLYIYRNPELPLRVRLE 47
>SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1473
Score = 23.4 bits (48), Expect = 8.8
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 266 WNEPVKNGYWPKIRLPNG 319
W++ KN YW I + NG
Sbjct: 1236 WHKTEKNKYWRSIFVENG 1253
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,252,237
Number of Sequences: 5004
Number of extensions: 21797
Number of successful extensions: 56
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56
length of database: 2,362,478
effective HSP length: 64
effective length of database: 2,042,222
effective search space used: 89857768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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