Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_N21
(328 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88176-2|AAO91740.3| 550|Caenorhabditis elegans Hypothetical pr... 30 0.45
Z82078-9|CAE11308.1| 949|Caenorhabditis elegans Hypothetical pr... 29 1.0
Z82078-8|CAB04948.2| 947|Caenorhabditis elegans Hypothetical pr... 29 1.0
AL023844-13|CAE11312.1| 949|Caenorhabditis elegans Hypothetical... 29 1.0
AL023844-12|CAA19535.2| 947|Caenorhabditis elegans Hypothetical... 29 1.0
AF047657-7|AAK18943.1| 424|Caenorhabditis elegans Hypothetical ... 28 1.8
U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I ho... 27 4.2
L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophi... 27 4.2
Z75531-3|CAA99799.1| 172|Caenorhabditis elegans Hypothetical pr... 26 5.6
AL117204-13|CAB55128.1| 286|Caenorhabditis elegans Hypothetical... 26 7.4
Z98877-2|CAB11570.1| 907|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z82079-1|CAB04949.1| 1529|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z80344-7|CAB02491.1| 1529|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z73976-1|CAA98289.1| 324|Caenorhabditis elegans Hypothetical pr... 25 9.7
AC026301-11|AAK68891.2| 273|Caenorhabditis elegans Hypothetical... 25 9.7
>U88176-2|AAO91740.3| 550|Caenorhabditis elegans Hypothetical
protein F18F11.4 protein.
Length = 550
Score = 29.9 bits (64), Expect = 0.45
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Frame = +2
Query: 5 MVVIDWRKGVRRSLSEDDKYSYFTEDVDLNTYMYYLHMN--YPYWMTDEVYGLNKERQGE 178
+V D R LSED + + T ++ + +YYLH+ + + V N
Sbjct: 384 VVHFDMHSVYRNELSEDKTHQHTTIEIYDSLNLYYLHLRRFERHLLNPPVVKYNNRFNSS 443
Query: 179 ILMYANSQLLARL--RME 226
+LM N+++L + RME
Sbjct: 444 LLMKLNTKMLDQFTERME 461
>Z82078-9|CAE11308.1| 949|Caenorhabditis elegans Hypothetical protein
Y48A6B.11b protein.
Length = 949
Score = 28.7 bits (61), Expect = 1.0
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +2
Query: 14 IDWRKGVRRSLSEDDKYSYFTEDVDLNTY-MYYLHMNYPYWMTDEVYGLNKERQGEILM 187
+D+R VRR L + +K Y + V + Y + N +EVY KE+ G++++
Sbjct: 881 LDYRYDVRRGLPDAEKQKYQWQQVQMTVIAARYANKNL-INEANEVYATEKEKLGQMVL 938
>Z82078-8|CAB04948.2| 947|Caenorhabditis elegans Hypothetical protein
Y48A6B.11a protein.
Length = 947
Score = 28.7 bits (61), Expect = 1.0
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +2
Query: 14 IDWRKGVRRSLSEDDKYSYFTEDVDLNTY-MYYLHMNYPYWMTDEVYGLNKERQGEILM 187
+D+R VRR L + +K Y + V + Y + N +EVY KE+ G++++
Sbjct: 879 LDYRYDVRRGLPDAEKQKYQWQQVQMTVIAARYANKNL-INEANEVYATEKEKLGQMVL 936
>AL023844-13|CAE11312.1| 949|Caenorhabditis elegans Hypothetical
protein Y48A6B.11b protein.
Length = 949
Score = 28.7 bits (61), Expect = 1.0
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +2
Query: 14 IDWRKGVRRSLSEDDKYSYFTEDVDLNTY-MYYLHMNYPYWMTDEVYGLNKERQGEILM 187
+D+R VRR L + +K Y + V + Y + N +EVY KE+ G++++
Sbjct: 881 LDYRYDVRRGLPDAEKQKYQWQQVQMTVIAARYANKNL-INEANEVYATEKEKLGQMVL 938
>AL023844-12|CAA19535.2| 947|Caenorhabditis elegans Hypothetical
protein Y48A6B.11a protein.
Length = 947
Score = 28.7 bits (61), Expect = 1.0
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +2
Query: 14 IDWRKGVRRSLSEDDKYSYFTEDVDLNTY-MYYLHMNYPYWMTDEVYGLNKERQGEILM 187
+D+R VRR L + +K Y + V + Y + N +EVY KE+ G++++
Sbjct: 879 LDYRYDVRRGLPDAEKQKYQWQQVQMTVIAARYANKNL-INEANEVYATEKEKLGQMVL 936
>AF047657-7|AAK18943.1| 424|Caenorhabditis elegans Hypothetical
protein F37B4.7 protein.
Length = 424
Score = 27.9 bits (59), Expect = 1.8
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +2
Query: 14 IDWRKGVRRSLSEDDKYSYFTEDVDLNTYMYYLHM 118
++W++ + L +++ E VD ++YM YL M
Sbjct: 183 VEWKEAYEKKLEDNNVQGNLKEIVDQSSYMDYLRM 217
>U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I
homolog protein.
Length = 1257
Score = 26.6 bits (56), Expect = 4.2
Identities = 14/71 (19%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +2
Query: 14 IDWRKGVRRSLSEDDKYSYFTEDV--DLNTYMYYLHMNYPYWMTDEVYGLNKERQGEILM 187
++W+K + ++ D F EDV D +++ + YP M + +G + +++
Sbjct: 481 VNWKKNIEKNRRHIDYSDIFDEDVGSDEGMWVWEIENFYPSIMDEAFHGQFYDADAYLVL 540
Query: 188 YANSQLLARLR 220
+ +LR
Sbjct: 541 KTTREASGQLR 551
>L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophila
flightless) homologprotein 1 protein.
Length = 1257
Score = 26.6 bits (56), Expect = 4.2
Identities = 14/71 (19%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +2
Query: 14 IDWRKGVRRSLSEDDKYSYFTEDV--DLNTYMYYLHMNYPYWMTDEVYGLNKERQGEILM 187
++W+K + ++ D F EDV D +++ + YP M + +G + +++
Sbjct: 481 VNWKKNIEKNRRHIDYSDIFDEDVGSDEGMWVWEIENFYPSIMDEAFHGQFYDADAYLVL 540
Query: 188 YANSQLLARLR 220
+ +LR
Sbjct: 541 KTTREASGQLR 551
>Z75531-3|CAA99799.1| 172|Caenorhabditis elegans Hypothetical
protein C54D10.3 protein.
Length = 172
Score = 26.2 bits (55), Expect = 5.6
Identities = 14/21 (66%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = +3
Query: 15 STGVKECAAR-YLKTTSILTS 74
STGV ECAA+ YL T SI S
Sbjct: 139 STGVSECAAKAYLCTNSIYLS 159
>AL117204-13|CAB55128.1| 286|Caenorhabditis elegans Hypothetical
protein Y116A8C.22 protein.
Length = 286
Score = 25.8 bits (54), Expect = 7.4
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +2
Query: 50 EDDKYSYFTEDVDLNTYMYYLHMNYPYWMTDEVYGLNKERQGEILMYANSQLLARLRMER 229
EDD Y T D+ + + H N Y ++G +K + E+L N ++A++ +R
Sbjct: 24 EDDDYPLSTIDMAVQALIRNPHHNVDYICGVMIFGGSKNQFNELL---NPVVVAQMSKQR 80
Query: 230 LSHKM 244
K+
Sbjct: 81 KQKKV 85
>Z98877-2|CAB11570.1| 907|Caenorhabditis elegans Hypothetical
protein Y69H2.2 protein.
Length = 907
Score = 25.4 bits (53), Expect = 9.7
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Frame = -3
Query: 179 SLLDALCSNRTLRQSSN---TDNSYEGNTCKC*DRR 81
S + + C+ R+ S +DNS G TC+C D++
Sbjct: 104 SEIGSACATSQCREGSTCEASDNSTTGYTCRCTDKQ 139
>Z82079-1|CAB04949.1| 1529|Caenorhabditis elegans Hypothetical
protein F15D4.1 protein.
Length = 1529
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = +2
Query: 62 YSYF--TEDVDLNTYMYYLHMNYPYW 133
Y +F +EDVDLNT++ L ++ W
Sbjct: 783 YCHFDLSEDVDLNTFLTRLELHNSLW 808
>Z80344-7|CAB02491.1| 1529|Caenorhabditis elegans Hypothetical
protein F15D4.1 protein.
Length = 1529
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = +2
Query: 62 YSYF--TEDVDLNTYMYYLHMNYPYW 133
Y +F +EDVDLNT++ L ++ W
Sbjct: 783 YCHFDLSEDVDLNTFLTRLELHNSLW 808
>Z73976-1|CAA98289.1| 324|Caenorhabditis elegans Hypothetical
protein T07C12.1 protein.
Length = 324
Score = 25.4 bits (53), Expect = 9.7
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Frame = +2
Query: 62 YSYFTE--DVDLNTYMY--YLHMNYPYWMTDEVYGLN 160
YS FT VD++TY Y Y+ +N Y+ GLN
Sbjct: 54 YSCFTVFVPVDVHTYRYCFYMFINGGYFFESSTLGLN 90
>AC026301-11|AAK68891.2| 273|Caenorhabditis elegans Hypothetical
protein Y54F10BM.12 protein.
Length = 273
Score = 25.4 bits (53), Expect = 9.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 44 LSEDDKYSYFTEDVDLNTYMYYLHMNY 124
L DDK+ T+DV L Y +HM+Y
Sbjct: 51 LLSDDKFFNVTDDVYLFMTGYPIHMSY 77
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,889,003
Number of Sequences: 27780
Number of extensions: 118684
Number of successful extensions: 287
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 284
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 287
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 398409266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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