Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_N18
(369 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 37 0.004
AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical ... 31 0.26
AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical ... 31 0.26
U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical pr... 28 1.8
AC006696-8|AAF39989.1| 120|Caenorhabditis elegans Hypothetical ... 27 4.2
AF038619-5|AAB92078.6| 1262|Caenorhabditis elegans Gut on exteri... 26 7.3
AB073209-1|BAB70472.1| 1262|Caenorhabditis elegans rac effector ... 26 7.3
Z81527-12|CAB04277.2| 487|Caenorhabditis elegans Hypothetical p... 26 9.7
Z48809-8|CAA88748.2| 535|Caenorhabditis elegans Hypothetical pr... 26 9.7
Z48795-8|CAA88732.2| 535|Caenorhabditis elegans Hypothetical pr... 26 9.7
Z35719-2|CAA84799.2| 715|Caenorhabditis elegans Hypothetical pr... 26 9.7
AY874872-1|AAX62733.1| 1668|Caenorhabditis elegans chitin syntha... 26 9.7
AF026210-2|AAB71283.2| 1668|Caenorhabditis elegans Chitin syntha... 26 9.7
AC024819-3|AAF59587.2| 923|Caenorhabditis elegans Hypothetical ... 26 9.7
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 37.1 bits (82), Expect = 0.004
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +3
Query: 135 CYYDSKSYIRESQARMLPTDLEPALSFCTHLLYKSAGIQADTY*MVSLNENLDIDRA-HA 311
CY+ + + R+ +A+ +P D P L CTH+L+ + AD +L D A
Sbjct: 57 CYFTNWAQYRQGRAKFVPEDYTPGL--CTHILFAFGWMNADYTVRAYDPADLPNDWAGEG 114
Query: 312 NYRAITNLKRQFPQLRVFL 368
YR + LK QL+ L
Sbjct: 115 MYRRVNKLKVTDTQLKTLL 133
>AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical
protein Y73F8A.9 protein.
Length = 419
Score = 31.1 bits (67), Expect = 0.26
Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = -1
Query: 294 CPNSH*VKP-FNMCQLGCRQICTADGCRTKEQAPSP 190
C N P N CQ C+Q C C T+ AP+P
Sbjct: 90 CQNQCQFAPSMNECQSSCQQTCQTSSCYTQIAAPAP 125
>AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical
protein Y73F8A.8 protein.
Length = 420
Score = 31.1 bits (67), Expect = 0.26
Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = -1
Query: 294 CPNSH*VKP-FNMCQLGCRQICTADGCRTKEQAPSP 190
C N P N CQ C+Q C C T+ AP+P
Sbjct: 91 CQNQCQFAPSMNECQSSCQQTCQTSSCYTQIAAPAP 126
>U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical
protein C25A8.4 protein.
Length = 1067
Score = 28.3 bits (60), Expect = 1.8
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Frame = +3
Query: 171 QARMLPTDLEPALSFCTHLLYKSAGIQADT----Y*MVSLNENLDIDRAHANYRAITNLK 338
+ R+ P L+ ++ CTHL+Y S I DT Y + + DID N R L+
Sbjct: 37 KTRLSPNLLQN-ITTCTHLVYGSIPIDRDTGYPQYSVSDVESGYDID----NIRTFMRLR 91
Query: 339 RQFPQLRVFL 368
+ P ++ +
Sbjct: 92 KYHPNAKLLM 101
>AC006696-8|AAF39989.1| 120|Caenorhabditis elegans Hypothetical
protein W08E12.2 protein.
Length = 120
Score = 27.1 bits (57), Expect = 4.2
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -1
Query: 234 CTADGCRTKEQAPSP*AAYVLEIL*YSSCCHSSRGLCFGY 115
C+ + C AP +Y YSSCC+S+ C GY
Sbjct: 65 CSCNPCNGGGCAPR--CSYCPNNFGYSSCCNSNNFSCCGY 102
>AF038619-5|AAB92078.6| 1262|Caenorhabditis elegans Gut on exterior
protein 2 protein.
Length = 1262
Score = 26.2 bits (55), Expect = 7.3
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = +1
Query: 115 VAKAKSSATMTAR---AISENLKHVCCLRTWSLLFRSAPICCTN 237
+AK AT A+ +SE L+H + TW R+ P+ +N
Sbjct: 56 IAKYSEEATRHAQFNDMLSEGLQHAANMYTWRCCSRAVPMAKSN 99
>AB073209-1|BAB70472.1| 1262|Caenorhabditis elegans rac effector
protein.
Length = 1262
Score = 26.2 bits (55), Expect = 7.3
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = +1
Query: 115 VAKAKSSATMTAR---AISENLKHVCCLRTWSLLFRSAPICCTN 237
+AK AT A+ +SE L+H + TW R+ P+ +N
Sbjct: 56 IAKYSEEATRHAQFNDMLSEGLQHAANMYTWRCCSRAVPMAKSN 99
>Z81527-12|CAB04277.2| 487|Caenorhabditis elegans Hypothetical
protein F35E12.10 protein.
Length = 487
Score = 25.8 bits (54), Expect = 9.7
Identities = 8/30 (26%), Positives = 19/30 (63%)
Frame = +3
Query: 108 SPSSQSKVLCYYDSKSYIRESQARMLPTDL 197
SP+ + + L YD+++Y +++PT++
Sbjct: 306 SPTHKKETLIQYDAQTYTSSQMPQVIPTNM 335
>Z48809-8|CAA88748.2| 535|Caenorhabditis elegans Hypothetical
protein T01E8.1 protein.
Length = 535
Score = 25.8 bits (54), Expect = 9.7
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2
Query: 317 IISVRPINVQILIE*NHLIC 258
I+SVR N+Q + NHL+C
Sbjct: 299 IVSVREANIQAVDNANHLLC 318
>Z48795-8|CAA88732.2| 535|Caenorhabditis elegans Hypothetical
protein T01E8.1 protein.
Length = 535
Score = 25.8 bits (54), Expect = 9.7
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2
Query: 317 IISVRPINVQILIE*NHLIC 258
I+SVR N+Q + NHL+C
Sbjct: 299 IVSVREANIQAVDNANHLLC 318
>Z35719-2|CAA84799.2| 715|Caenorhabditis elegans Hypothetical
protein F17C8.3 protein.
Length = 715
Score = 25.8 bits (54), Expect = 9.7
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 96 NHPASPSSQSKVLCYYDSKSYIRESQARMLPTDL 197
N+PA P + + L YY S I+ES+ + + L
Sbjct: 681 NNPAKPGAVTGQLTYYSFLSSIKESRYKPIGVQL 714
>AY874872-1|AAX62733.1| 1668|Caenorhabditis elegans chitin synthase
2 protein.
Length = 1668
Score = 25.8 bits (54), Expect = 9.7
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 61 SPGYWR*RLRLPTTQHHLVAKAKSSATMTARAISENLKH 177
S G+W + LP Q HLVA S T+ + A +N H
Sbjct: 286 SSGFWALPMFLPNLQKHLVA-IPVSLTLISLAWWQNFVH 323
>AF026210-2|AAB71283.2| 1668|Caenorhabditis elegans Chitin synthase
protein 2 protein.
Length = 1668
Score = 25.8 bits (54), Expect = 9.7
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 61 SPGYWR*RLRLPTTQHHLVAKAKSSATMTARAISENLKH 177
S G+W + LP Q HLVA S T+ + A +N H
Sbjct: 286 SSGFWALPMFLPNLQKHLVA-IPVSLTLISLAWWQNFVH 323
>AC024819-3|AAF59587.2| 923|Caenorhabditis elegans Hypothetical
protein Y55B1AL.3a protein.
Length = 923
Score = 25.8 bits (54), Expect = 9.7
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 49 PWSPSPGYWR*RLRLPTTQHHLVAKAKSSATMTARAISEN 168
P+SP P + R LR P T V KS++ + + +EN
Sbjct: 18 PFSPIPKFSR--LRTPRTSREYVCPLKSTSPQSPSSSTEN 55
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,677,249
Number of Sequences: 27780
Number of extensions: 135034
Number of successful extensions: 343
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 343
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 524900642
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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