Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_N14
(630 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88308-17|AAK68214.1| 657|Caenorhabditis elegans Uncoordinated ... 89 3e-18
U88308-16|AAK68212.1| 586|Caenorhabditis elegans Uncoordinated ... 89 3e-18
U88308-15|AAK68218.1| 548|Caenorhabditis elegans Uncoordinated ... 89 3e-18
U88308-14|AAK68213.1| 546|Caenorhabditis elegans Uncoordinated ... 89 3e-18
AF144259-1|AAD37367.1| 546|Caenorhabditis elegans AP180-like ad... 89 3e-18
AF144258-1|AAD37366.1| 548|Caenorhabditis elegans AP180-like ad... 89 3e-18
AF144257-1|AAD37365.1| 586|Caenorhabditis elegans AP180-like ad... 89 3e-18
U88308-13|AAK68215.1| 534|Caenorhabditis elegans Uncoordinated ... 88 4e-18
AF144261-1|AAD37369.1| 456|Caenorhabditis elegans AP180-like ad... 88 6e-18
AF144260-1|AAD37368.1| 535|Caenorhabditis elegans AP180-like ad... 88 6e-18
U88308-12|AAK68216.1| 467|Caenorhabditis elegans Uncoordinated ... 87 7e-18
Z96102-6|CAJ85756.1| 1062|Caenorhabditis elegans Hypothetical pr... 35 0.055
Z96102-5|CAB54262.2| 1096|Caenorhabditis elegans Hypothetical pr... 35 0.055
Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical pr... 35 0.055
Z81027-7|CAJ85745.1| 1062|Caenorhabditis elegans Hypothetical pr... 35 0.055
Z81027-6|CAB54178.2| 1096|Caenorhabditis elegans Hypothetical pr... 35 0.055
Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical pr... 35 0.055
U40858-1|AAA83272.1| 1096|Caenorhabditis elegans serine/threonin... 35 0.055
U22183-1|AAA97437.1| 1192|Caenorhabditis elegans serine/threonin... 35 0.055
Z80220-2|CAD27608.1| 3185|Caenorhabditis elegans Hypothetical pr... 32 0.39
Z80220-1|CAB02304.1| 3212|Caenorhabditis elegans Hypothetical pr... 32 0.39
Z22174-1|CAA80128.1| 732|Caenorhabditis elegans Hypothetical pr... 31 0.68
AL023811-1|CAA19422.2| 947|Caenorhabditis elegans Hypothetical ... 31 0.68
Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z72512-4|CAA96666.1| 328|Caenorhabditis elegans Hypothetical pr... 30 1.6
AF225921-1|AAF36687.1| 335|Caenorhabditis elegans secretory car... 30 1.6
AF003739-8|AAK84628.1| 335|Caenorhabditis elegans Scamp (synapt... 30 1.6
U97194-2|AAN84846.1| 806|Caenorhabditis elegans Prion-like-(q/n... 29 2.1
U97194-1|AAK68236.1| 788|Caenorhabditis elegans Prion-like-(q/n... 29 2.1
AF170425-1|AAF89696.1| 788|Caenorhabditis elegans putative MAP-... 29 2.1
AF025460-1|AAB70991.2| 293|Caenorhabditis elegans Hypothetical ... 29 2.1
Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical pr... 29 3.6
AF039044-8|AAG24129.1| 717|Caenorhabditis elegans Nuclear hormo... 29 3.6
Z80789-1|CAB02551.1| 708|Caenorhabditis elegans Hypothetical pr... 28 4.8
AF016688-7|AAB66080.1| 726|Caenorhabditis elegans Hypothetical ... 28 4.8
U80444-11|AAB37793.2| 304|Caenorhabditis elegans Hypothetical p... 28 6.3
AF106577-11|AAC78185.1| 322|Caenorhabditis elegans Hypothetical... 28 6.3
AF039044-12|AAG24130.2| 405|Caenorhabditis elegans Hypothetical... 28 6.3
AF025468-1|AAF02175.1| 174|Caenorhabditis elegans Serpentine re... 28 6.3
Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z48009-11|CAA88088.2| 467|Caenorhabditis elegans Hypothetical p... 27 8.4
U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore co... 27 8.4
AL132862-11|CAB60541.1| 396|Caenorhabditis elegans Hypothetical... 27 8.4
AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen prot... 27 8.4
>U88308-17|AAK68214.1| 657|Caenorhabditis elegans Uncoordinated
protein 11, isoform c protein.
Length = 657
Score = 88.6 bits (210), Expect = 3e-18
Identities = 60/172 (34%), Positives = 87/172 (50%), Gaps = 5/172 (2%)
Frame = +2
Query: 2 LDLYKKFLIRMDRVGEFLKVAENVGIDKGDIPDLTKAPSSLLDALEGHLATLEGKKGSAA 181
LD YK FL R+D+V EFL+VAE+VGID+G+IPDLT+AP+SLL+ALE HL LEG K A
Sbjct: 251 LDTYKSFLTRLDKVAEFLRVAESVGIDRGEIPDLTRAPASLLEALEAHLIHLEGGK---A 307
Query: 182 NTPTQTASAQKNVASVMGALSSTSSSFGNAAASTRLDNQPNGAPPLFIDDSLRQQALXXX 361
PTQ A + + G+A ++ + F D +++++
Sbjct: 308 PPPTQQHVAPHQFTTGFAFSQQPQPALGDAERQRYIELEQERLRQ-FED---QKKSINSA 363
Query: 362 XXXMNQYKNKVQSPTNAANNP-----FLSSAPASNNQQSIVDLFGPSPADTA 502
N + +P +A P F SSA + + + FG A +A
Sbjct: 364 NPFANDVASAAPAPATSAAQPDLLDMFQSSAAPAPQTADVTNPFGNFAAPSA 415
>U88308-16|AAK68212.1| 586|Caenorhabditis elegans Uncoordinated
protein 11, isoform a protein.
Length = 586
Score = 88.6 bits (210), Expect = 3e-18
Identities = 60/172 (34%), Positives = 87/172 (50%), Gaps = 5/172 (2%)
Frame = +2
Query: 2 LDLYKKFLIRMDRVGEFLKVAENVGIDKGDIPDLTKAPSSLLDALEGHLATLEGKKGSAA 181
LD YK FL R+D+V EFL+VAE+VGID+G+IPDLT+AP+SLL+ALE HL LEG K A
Sbjct: 251 LDTYKSFLTRLDKVAEFLRVAESVGIDRGEIPDLTRAPASLLEALEAHLIHLEGGK---A 307
Query: 182 NTPTQTASAQKNVASVMGALSSTSSSFGNAAASTRLDNQPNGAPPLFIDDSLRQQALXXX 361
PTQ A + + G+A ++ + F D +++++
Sbjct: 308 PPPTQQHVAPHQFTTGFAFSQQPQPALGDAERQRYIELEQERLRQ-FED---QKKSINSA 363
Query: 362 XXXMNQYKNKVQSPTNAANNP-----FLSSAPASNNQQSIVDLFGPSPADTA 502
N + +P +A P F SSA + + + FG A +A
Sbjct: 364 NPFANDVASAAPAPATSAAQPDLLDMFQSSAAPAPQTADVTNPFGNFAAPSA 415
>U88308-15|AAK68218.1| 548|Caenorhabditis elegans Uncoordinated
protein 11, isoform h protein.
Length = 548
Score = 88.6 bits (210), Expect = 3e-18
Identities = 60/172 (34%), Positives = 87/172 (50%), Gaps = 5/172 (2%)
Frame = +2
Query: 2 LDLYKKFLIRMDRVGEFLKVAENVGIDKGDIPDLTKAPSSLLDALEGHLATLEGKKGSAA 181
LD YK FL R+D+V EFL+VAE+VGID+G+IPDLT+AP+SLL+ALE HL LEG K A
Sbjct: 251 LDTYKSFLTRLDKVAEFLRVAESVGIDRGEIPDLTRAPASLLEALEAHLIHLEGGK---A 307
Query: 182 NTPTQTASAQKNVASVMGALSSTSSSFGNAAASTRLDNQPNGAPPLFIDDSLRQQALXXX 361
PTQ A + + G+A ++ + F D +++++
Sbjct: 308 PPPTQQHVAPHQFTTGFAFSQQPQPALGDAERQRYIELEQERLRQ-FED---QKKSINSA 363
Query: 362 XXXMNQYKNKVQSPTNAANNP-----FLSSAPASNNQQSIVDLFGPSPADTA 502
N + +P +A P F SSA + + + FG A +A
Sbjct: 364 NPFANDVASAAPAPATSAAQPDLLDMFQSSAAPAPQTADVTNPFGNFAAPSA 415
>U88308-14|AAK68213.1| 546|Caenorhabditis elegans Uncoordinated
protein 11, isoform b protein.
Length = 546
Score = 88.6 bits (210), Expect = 3e-18
Identities = 60/172 (34%), Positives = 87/172 (50%), Gaps = 5/172 (2%)
Frame = +2
Query: 2 LDLYKKFLIRMDRVGEFLKVAENVGIDKGDIPDLTKAPSSLLDALEGHLATLEGKKGSAA 181
LD YK FL R+D+V EFL+VAE+VGID+G+IPDLT+AP+SLL+ALE HL LEG K A
Sbjct: 251 LDTYKSFLTRLDKVAEFLRVAESVGIDRGEIPDLTRAPASLLEALEAHLIHLEGGK---A 307
Query: 182 NTPTQTASAQKNVASVMGALSSTSSSFGNAAASTRLDNQPNGAPPLFIDDSLRQQALXXX 361
PTQ A + + G+A ++ + F D +++++
Sbjct: 308 PPPTQQHVAPHQFTTGFAFSQQPQPALGDAERQRYIELEQERLRQ-FED---QKKSINSA 363
Query: 362 XXXMNQYKNKVQSPTNAANNP-----FLSSAPASNNQQSIVDLFGPSPADTA 502
N + +P +A P F SSA + + + FG A +A
Sbjct: 364 NPFANDVASAAPAPATSAAQPDLLDMFQSSAAPAPQTADVTNPFGNFAAPSA 415
>AF144259-1|AAD37367.1| 546|Caenorhabditis elegans AP180-like
adaptor protein protein.
Length = 546
Score = 88.6 bits (210), Expect = 3e-18
Identities = 60/172 (34%), Positives = 87/172 (50%), Gaps = 5/172 (2%)
Frame = +2
Query: 2 LDLYKKFLIRMDRVGEFLKVAENVGIDKGDIPDLTKAPSSLLDALEGHLATLEGKKGSAA 181
LD YK FL R+D+V EFL+VAE+VGID+G+IPDLT+AP+SLL+ALE HL LEG K A
Sbjct: 251 LDTYKSFLTRLDKVAEFLRVAESVGIDRGEIPDLTRAPASLLEALEAHLIHLEGGK---A 307
Query: 182 NTPTQTASAQKNVASVMGALSSTSSSFGNAAASTRLDNQPNGAPPLFIDDSLRQQALXXX 361
PTQ A + + G+A ++ + F D +++++
Sbjct: 308 PPPTQQHVAPHQFTTGFAFSQQPQPALGDAERQRYIELEQERLRQ-FED---QKKSINSA 363
Query: 362 XXXMNQYKNKVQSPTNAANNP-----FLSSAPASNNQQSIVDLFGPSPADTA 502
N + +P +A P F SSA + + + FG A +A
Sbjct: 364 NPFANDVASAAPAPATSAAQPDLLDMFQSSAAPAPQTADVTNPFGNFAAPSA 415
>AF144258-1|AAD37366.1| 548|Caenorhabditis elegans AP180-like
adaptor protein protein.
Length = 548
Score = 88.6 bits (210), Expect = 3e-18
Identities = 60/172 (34%), Positives = 87/172 (50%), Gaps = 5/172 (2%)
Frame = +2
Query: 2 LDLYKKFLIRMDRVGEFLKVAENVGIDKGDIPDLTKAPSSLLDALEGHLATLEGKKGSAA 181
LD YK FL R+D+V EFL+VAE+VGID+G+IPDLT+AP+SLL+ALE HL LEG K A
Sbjct: 251 LDTYKSFLTRLDKVAEFLRVAESVGIDRGEIPDLTRAPASLLEALEAHLIHLEGGK---A 307
Query: 182 NTPTQTASAQKNVASVMGALSSTSSSFGNAAASTRLDNQPNGAPPLFIDDSLRQQALXXX 361
PTQ A + + G+A ++ + F D +++++
Sbjct: 308 PPPTQQHVAPHQFTTGFAFSQQPQPALGDAERQRYIELEQERLRQ-FED---QKKSINSA 363
Query: 362 XXXMNQYKNKVQSPTNAANNP-----FLSSAPASNNQQSIVDLFGPSPADTA 502
N + +P +A P F SSA + + + FG A +A
Sbjct: 364 NPFANDVASAAPAPATSAAQPDLLDMFQSSAAPAPQTADVTNPFGNFAAPSA 415
>AF144257-1|AAD37365.1| 586|Caenorhabditis elegans AP180-like
adaptor protein protein.
Length = 586
Score = 88.6 bits (210), Expect = 3e-18
Identities = 60/172 (34%), Positives = 87/172 (50%), Gaps = 5/172 (2%)
Frame = +2
Query: 2 LDLYKKFLIRMDRVGEFLKVAENVGIDKGDIPDLTKAPSSLLDALEGHLATLEGKKGSAA 181
LD YK FL R+D+V EFL+VAE+VGID+G+IPDLT+AP+SLL+ALE HL LEG K A
Sbjct: 251 LDTYKSFLTRLDKVAEFLRVAESVGIDRGEIPDLTRAPASLLEALEAHLIHLEGGK---A 307
Query: 182 NTPTQTASAQKNVASVMGALSSTSSSFGNAAASTRLDNQPNGAPPLFIDDSLRQQALXXX 361
PTQ A + + G+A ++ + F D +++++
Sbjct: 308 PPPTQQHVAPHQFTTGFAFSQQPQPALGDAERQRYIELEQERLRQ-FED---QKKSINSA 363
Query: 362 XXXMNQYKNKVQSPTNAANNP-----FLSSAPASNNQQSIVDLFGPSPADTA 502
N + +P +A P F SSA + + + FG A +A
Sbjct: 364 NPFANDVASAAPAPATSAAQPDLLDMFQSSAAPAPQTADVTNPFGNFAAPSA 415
>U88308-13|AAK68215.1| 534|Caenorhabditis elegans Uncoordinated
protein 11, isoform d protein.
Length = 534
Score = 88.2 bits (209), Expect = 4e-18
Identities = 69/178 (38%), Positives = 96/178 (53%), Gaps = 6/178 (3%)
Frame = +2
Query: 2 LDLYKKFLIRMDRVGEFLKVAENVGIDKGDIPDLTKAPSSLLDALEGHLATLEGKKGSAA 181
LD YK FL R+D+V EFL+VAE+VGID+G+IPDLT+AP+SLL+ALE HL LEG K A
Sbjct: 251 LDTYKSFLTRLDKVAEFLRVAESVGIDRGEIPDLTRAPASLLEALEAHLIHLEGGK---A 307
Query: 182 NTPTQTASAQKNVASVMGALSSTSSSFGNAAASTRLDNQPNGAPPLFIDDSLRQQALXXX 361
PTQ A +T +F QP A + D+ RQ+ +
Sbjct: 308 PPPTQQHVAPHQF--------TTGFAF---------SQQPQPA----LGDAERQRYIELE 346
Query: 362 XXXMNQYKNKVQSPTNAAN---NPFLSSAPA---SNNQQSIVDLFGPSPADTASDNEQ 517
+ Q++++ +S N+AN N S+APA S Q ++D+F S A N +
Sbjct: 347 QERLRQFEDQKKS-INSANPFANDVASAAPAPATSAAQPDLLDMFQSSAAPLLQCNRK 403
>AF144261-1|AAD37369.1| 456|Caenorhabditis elegans AP180-like
adaptor protein protein.
Length = 456
Score = 87.8 bits (208), Expect = 6e-18
Identities = 56/153 (36%), Positives = 81/153 (52%)
Frame = +2
Query: 2 LDLYKKFLIRMDRVGEFLKVAENVGIDKGDIPDLTKAPSSLLDALEGHLATLEGKKGSAA 181
LD YK FL R+D+V EFL+VAE+VGID+G+IPDLT+AP+SLL+ALE HL LEG K A
Sbjct: 251 LDTYKSFLTRLDKVAEFLRVAESVGIDRGEIPDLTRAPASLLEALEAHLIHLEGGK---A 307
Query: 182 NTPTQTASAQKNVASVMGALSSTSSSFGNAAASTRLDNQPNGAPPLFIDDSLRQQALXXX 361
PTQ A + + G+A ++ + F D +++++
Sbjct: 308 PPPTQQHVAPHQFTTGFAFSQQPQPALGDAERQRYIELEQERLRQ-FED---QKKSINSA 363
Query: 362 XXXMNQYKNKVQSPTNAANNPFLSSAPASNNQQ 460
N + +P +A P + +AP QQ
Sbjct: 364 NPFANDVASAAPAPATSAAQP-MYTAPMGMYQQ 395
>AF144260-1|AAD37368.1| 535|Caenorhabditis elegans AP180-like
adaptor protein protein.
Length = 535
Score = 87.8 bits (208), Expect = 6e-18
Identities = 68/170 (40%), Positives = 94/170 (55%), Gaps = 6/170 (3%)
Frame = +2
Query: 2 LDLYKKFLIRMDRVGEFLKVAENVGIDKGDIPDLTKAPSSLLDALEGHLATLEGKKGSAA 181
LD YK FL R+D+V EFL+VAE+VGID+G+IPDLT+AP+SLL+ALE HL LEG K A
Sbjct: 251 LDTYKSFLTRLDKVAEFLRVAESVGIDRGEIPDLTRAPASLLEALEAHLIHLEGGK---A 307
Query: 182 NTPTQTASAQKNVASVMGALSSTSSSFGNAAASTRLDNQPNGAPPLFIDDSLRQQALXXX 361
PTQ A +T +F QP A + D+ RQ+ +
Sbjct: 308 PPPTQQHVAPHQF--------TTGFAF---------SQQPQPA----LGDAERQRYIELE 346
Query: 362 XXXMNQYKNKVQSPTNAAN---NPFLSSAPA---SNNQQSIVDLFGPSPA 493
+ Q++++ +S N+AN N S+APA S Q ++D+F S A
Sbjct: 347 QERLRQFEDQKKS-INSANPFANDVASAAPAPATSAAQPDLLDMFQSSAA 395
>U88308-12|AAK68216.1| 467|Caenorhabditis elegans Uncoordinated
protein 11, isoform e protein.
Length = 467
Score = 87.4 bits (207), Expect = 7e-18
Identities = 43/65 (66%), Positives = 52/65 (80%)
Frame = +2
Query: 2 LDLYKKFLIRMDRVGEFLKVAENVGIDKGDIPDLTKAPSSLLDALEGHLATLEGKKGSAA 181
LD YK FL R+D+V EFL+VAE+VGID+G+IPDLT+AP+SLL+ALE HL LEG K A
Sbjct: 251 LDTYKSFLTRLDKVAEFLRVAESVGIDRGEIPDLTRAPASLLEALEAHLIHLEGGK---A 307
Query: 182 NTPTQ 196
PTQ
Sbjct: 308 PPPTQ 312
>Z96102-6|CAJ85756.1| 1062|Caenorhabditis elegans Hypothetical
protein H39E23.1c protein.
Length = 1062
Score = 34.7 bits (76), Expect = 0.055
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = +2
Query: 113 PSSLLDALEGHLATLEGKKGS---AANTPTQTASAQKNVASVMGALSSTSSSFGNAAAST 283
PS ++ A+E + G+ G A P Q A++Q+ S ++ +S G AAA+
Sbjct: 707 PSQMMTAMESLKLSESGQTGGPTVATGGPPQRATSQQMSRSATTNSANMGASSGGAAAAA 766
Query: 284 RLDNQPNGAP 313
NQ +GAP
Sbjct: 767 SATNQLSGAP 776
>Z96102-5|CAB54262.2| 1096|Caenorhabditis elegans Hypothetical
protein H39E23.1b protein.
Length = 1096
Score = 34.7 bits (76), Expect = 0.055
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = +2
Query: 113 PSSLLDALEGHLATLEGKKGS---AANTPTQTASAQKNVASVMGALSSTSSSFGNAAAST 283
PS ++ A+E + G+ G A P Q A++Q+ S ++ +S G AAA+
Sbjct: 741 PSQMMTAMESLKLSESGQTGGPTVATGGPPQRATSQQMSRSATTNSANMGASSGGAAAAA 800
Query: 284 RLDNQPNGAP 313
NQ +GAP
Sbjct: 801 SATNQLSGAP 810
>Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical protein
H39E23.1a protein.
Length = 1192
Score = 34.7 bits (76), Expect = 0.055
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = +2
Query: 113 PSSLLDALEGHLATLEGKKGS---AANTPTQTASAQKNVASVMGALSSTSSSFGNAAAST 283
PS ++ A+E + G+ G A P Q A++Q+ S ++ +S G AAA+
Sbjct: 837 PSQMMTAMESLKLSESGQTGGPTVATGGPPQRATSQQMSRSATTNSANMGASSGGAAAAA 896
Query: 284 RLDNQPNGAP 313
NQ +GAP
Sbjct: 897 SATNQLSGAP 906
>Z81027-7|CAJ85745.1| 1062|Caenorhabditis elegans Hypothetical
protein H39E23.1c protein.
Length = 1062
Score = 34.7 bits (76), Expect = 0.055
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = +2
Query: 113 PSSLLDALEGHLATLEGKKGS---AANTPTQTASAQKNVASVMGALSSTSSSFGNAAAST 283
PS ++ A+E + G+ G A P Q A++Q+ S ++ +S G AAA+
Sbjct: 707 PSQMMTAMESLKLSESGQTGGPTVATGGPPQRATSQQMSRSATTNSANMGASSGGAAAAA 766
Query: 284 RLDNQPNGAP 313
NQ +GAP
Sbjct: 767 SATNQLSGAP 776
>Z81027-6|CAB54178.2| 1096|Caenorhabditis elegans Hypothetical
protein H39E23.1b protein.
Length = 1096
Score = 34.7 bits (76), Expect = 0.055
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = +2
Query: 113 PSSLLDALEGHLATLEGKKGS---AANTPTQTASAQKNVASVMGALSSTSSSFGNAAAST 283
PS ++ A+E + G+ G A P Q A++Q+ S ++ +S G AAA+
Sbjct: 741 PSQMMTAMESLKLSESGQTGGPTVATGGPPQRATSQQMSRSATTNSANMGASSGGAAAAA 800
Query: 284 RLDNQPNGAP 313
NQ +GAP
Sbjct: 801 SATNQLSGAP 810
>Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical protein
H39E23.1a protein.
Length = 1192
Score = 34.7 bits (76), Expect = 0.055
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = +2
Query: 113 PSSLLDALEGHLATLEGKKGS---AANTPTQTASAQKNVASVMGALSSTSSSFGNAAAST 283
PS ++ A+E + G+ G A P Q A++Q+ S ++ +S G AAA+
Sbjct: 837 PSQMMTAMESLKLSESGQTGGPTVATGGPPQRATSQQMSRSATTNSANMGASSGGAAAAA 896
Query: 284 RLDNQPNGAP 313
NQ +GAP
Sbjct: 897 SATNQLSGAP 906
>U40858-1|AAA83272.1| 1096|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 1096
Score = 34.7 bits (76), Expect = 0.055
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = +2
Query: 113 PSSLLDALEGHLATLEGKKGS---AANTPTQTASAQKNVASVMGALSSTSSSFGNAAAST 283
PS ++ A+E + G+ G A P Q A++Q+ S ++ +S G AAA+
Sbjct: 741 PSQMMTAMESLKLSESGQTGGPTVATGGPPQRATSQQMSRSATTNSANMGASSGGAAAAA 800
Query: 284 RLDNQPNGAP 313
NQ +GAP
Sbjct: 801 SATNQLSGAP 810
>U22183-1|AAA97437.1| 1192|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 1192
Score = 34.7 bits (76), Expect = 0.055
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = +2
Query: 113 PSSLLDALEGHLATLEGKKGS---AANTPTQTASAQKNVASVMGALSSTSSSFGNAAAST 283
PS ++ A+E + G+ G A P Q A++Q+ S ++ +S G AAA+
Sbjct: 837 PSQMMTAMESLKLSESGQTGGPTVATGGPPQRATSQQMSRSATTNSANMGASSGGAAAAA 896
Query: 284 RLDNQPNGAP 313
NQ +GAP
Sbjct: 897 SATNQLSGAP 906
>Z80220-2|CAD27608.1| 3185|Caenorhabditis elegans Hypothetical protein
T08G11.1b protein.
Length = 3185
Score = 31.9 bits (69), Expect = 0.39
Identities = 16/71 (22%), Positives = 30/71 (42%)
Frame = +2
Query: 164 KKGSAANTPTQTASAQKNVASVMGALSSTSSSFGNAAASTRLDNQPNGAPPLFIDDSLRQ 343
K+ AN PT+ SA + +S + TSS + +D +G + ++DS+
Sbjct: 1522 KQAVTANVPTKAVSASPSASSTFTGGTKTSSGPPQPVGTLAIDCDMHGVEVILVEDSMHP 1581
Query: 344 QALXXXXXXMN 376
++ N
Sbjct: 1582 ESTQALILSFN 1592
>Z80220-1|CAB02304.1| 3212|Caenorhabditis elegans Hypothetical protein
T08G11.1a protein.
Length = 3212
Score = 31.9 bits (69), Expect = 0.39
Identities = 16/71 (22%), Positives = 30/71 (42%)
Frame = +2
Query: 164 KKGSAANTPTQTASAQKNVASVMGALSSTSSSFGNAAASTRLDNQPNGAPPLFIDDSLRQ 343
K+ AN PT+ SA + +S + TSS + +D +G + ++DS+
Sbjct: 1522 KQAVTANVPTKAVSASPSASSTFTGGTKTSSGPPQPVGTLAIDCDMHGVEVILVEDSMHP 1581
Query: 344 QALXXXXXXMN 376
++ N
Sbjct: 1582 ESTQALILSFN 1592
>Z22174-1|CAA80128.1| 732|Caenorhabditis elegans Hypothetical
protein K01B6.1 protein.
Length = 732
Score = 31.1 bits (67), Expect = 0.68
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 5/99 (5%)
Frame = +2
Query: 110 APSSLLDALEGHLATLEGKKGSAANTPTQTASAQKN---VASVMGALSSTSSSFGNAAAS 280
APS L + + AT S++ +PT T+++ + + S+M + +++ GNA
Sbjct: 10 APSLLPPSSQPSAATTRADDCSSSTSPTNTSASDASMEMLTSLMNGAVAAAAAPGNAL-- 67
Query: 281 TRLDNQPNGAPPLFIDD--SLRQQALXXXXXXMNQYKNK 391
+ ++ P PPLF D L+ L M Q+ N+
Sbjct: 68 VKQESPPLTTPPLFNPDLALLQFSQLFQAQQAMVQFHNQ 106
>AL023811-1|CAA19422.2| 947|Caenorhabditis elegans Hypothetical
protein C51F7.1 protein.
Length = 947
Score = 31.1 bits (67), Expect = 0.68
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +2
Query: 413 ANNPFLSSAPASNNQQSIVDLFGPSPADTASDNEQSF 523
A P SS+P +Q S+ GP PA+ A D + SF
Sbjct: 724 AVGPKTSSSPPPQSQPSLTASTGPLPAEIAGDRQASF 760
>Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical
protein F26C11.3 protein.
Length = 1317
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +2
Query: 152 TLEGKKGSAANTPTQTASAQKNVASVMGALSSTSSSFGNAAAST 283
T E K S+ PT ++++ + +S M SS+S++ ++ AST
Sbjct: 348 TSEDKPSSSTTVPTSASTSESSTSSPMAETSSSSTTSQSSPAST 391
>Z72512-4|CAA96666.1| 328|Caenorhabditis elegans Hypothetical
protein R07B5.6 protein.
Length = 328
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = +3
Query: 237 PYRRRHLLSATRLPPPGWIISQMVLRPFS*TIH*GSRPWL 356
P+ +L+ L PGW+ M+ RPF PW+
Sbjct: 257 PFINNTMLTIVYLTFPGWVYHMMIFRPFGNDCETVMMPWI 296
>AF225921-1|AAF36687.1| 335|Caenorhabditis elegans secretory
carrier membrane protein protein.
Length = 335
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 546 NPFADMFGAGPQPAPVSAAPTTGPT 620
NPFAD F A P P P +AA + PT
Sbjct: 4 NPFADPFSA-PPPPPAAAAAASKPT 27
>AF003739-8|AAK84628.1| 335|Caenorhabditis elegans Scamp (synaptic
vesicle protein)homolog protein 1 protein.
Length = 335
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 546 NPFADMFGAGPQPAPVSAAPTTGPT 620
NPFAD F A P P P +AA + PT
Sbjct: 4 NPFADPFSA-PPPPPAAAAAASKPT 27
>U97194-2|AAN84846.1| 806|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 21,
isoform b protein.
Length = 806
Score = 29.5 bits (63), Expect = 2.1
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 6/96 (6%)
Frame = +2
Query: 191 TQTASAQKNVASVMGAL---SSTSSSFGNAAASTRLDNQPNGAP---PLFIDDSLRQQAL 352
T ++SA VA++MG SST+S+ + P + I+ S+ AL
Sbjct: 529 TPSSSASSAVATLMGIAQVSSSTTSATTSVVPPVGAQRSTPATPVSAKIGINPSMVANAL 588
Query: 353 XXXXXXMNQYKNKVQSPTNAANNPFLSSAPASNNQQ 460
Q + K+ +NP LS+AP+S++ Q
Sbjct: 589 AEKNKQQQQQQQKLNQ-LQPPHNPSLSTAPSSSSAQ 623
>U97194-1|AAK68236.1| 788|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 21,
isoform a protein.
Length = 788
Score = 29.5 bits (63), Expect = 2.1
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 6/96 (6%)
Frame = +2
Query: 191 TQTASAQKNVASVMGAL---SSTSSSFGNAAASTRLDNQPNGAP---PLFIDDSLRQQAL 352
T ++SA VA++MG SST+S+ + P + I+ S+ AL
Sbjct: 511 TPSSSASSAVATLMGIAQVSSSTTSATTSVVPPVGAQRSTPATPVSAKIGINPSMVANAL 570
Query: 353 XXXXXXMNQYKNKVQSPTNAANNPFLSSAPASNNQQ 460
Q + K+ +NP LS+AP+S++ Q
Sbjct: 571 AEKNKQQQQQQQKLNQ-LQPPHNPSLSTAPSSSSAQ 605
>AF170425-1|AAF89696.1| 788|Caenorhabditis elegans putative
MAP-like protein protein.
Length = 788
Score = 29.5 bits (63), Expect = 2.1
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 6/96 (6%)
Frame = +2
Query: 191 TQTASAQKNVASVMGAL---SSTSSSFGNAAASTRLDNQPNGAP---PLFIDDSLRQQAL 352
T ++SA VA++MG SST+S+ + P + I+ S+ AL
Sbjct: 511 TPSSSASSAVATLMGIAQVSSSTTSATTSVVPPVGAQRSTPATPVSAKIGINPSMVANAL 570
Query: 353 XXXXXXMNQYKNKVQSPTNAANNPFLSSAPASNNQQ 460
Q + K+ +NP LS+AP+S++ Q
Sbjct: 571 AEKNKQQQQQQQKLNQ-LQPPHNPSLSTAPSSSSAQ 605
>AF025460-1|AAB70991.2| 293|Caenorhabditis elegans Hypothetical
protein F53A3.6 protein.
Length = 293
Score = 29.5 bits (63), Expect = 2.1
Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 1/116 (0%)
Frame = +2
Query: 107 KAPSSLLDALEGHLATLEGKKGSA-ANTPTQTASAQKNVASVMGALSSTSSSFGNAAAST 283
K+P S A+E A + + A A PT T + VA + A ++T+ AA
Sbjct: 2 KSPGS--SAMENAAAAAQAAQAQAQATIPTPTVNLPDVVA--IAAAAATAQPSAAAAKRP 57
Query: 284 RLDNQPNGAPPLFIDDSLRQQALXXXXXXMNQYKNKVQSPTNAANNPFLSSAPASN 451
+ PNG P + D +QQ M + + + A + F +S+ +++
Sbjct: 58 ASETPPNGLPKVPRHDEQQQQQNNAHSIVMGAREGFLAMNPSLAGHVFPASSASTS 113
>Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical protein
C03D6.4 protein.
Length = 1390
Score = 28.7 bits (61), Expect = 3.6
Identities = 29/102 (28%), Positives = 40/102 (39%), Gaps = 2/102 (1%)
Frame = +2
Query: 182 NTPTQTASAQKNVASVMGALSST--SSSFGNAAASTRLDNQPNGAPPLFIDDSLRQQALX 355
NT +ASA+ GA +S SS FG + + + N +G DDS+
Sbjct: 1150 NTGATSASAKPAGFGSFGAGASAKPSSVFGGSVTAPTVPNVDDGME----DDSMANGG-- 1203
Query: 356 XXXXXMNQYKNKVQSPTNAANNPFLSSAPASNNQQSIVDLFG 481
M+ N S T+ NNPF + S LFG
Sbjct: 1204 GSGGFMSGLGNARTSNTSGGNNPFAPKTSTGTSASSSSWLFG 1245
>AF039044-8|AAG24129.1| 717|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 83 protein.
Length = 717
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = -1
Query: 591 RAQAEDPRRTCQRTGCPTK--ADHLKLCSLSLAVSAGLGPNK 472
R A+ C+R C + + K+C L +AG+ PNK
Sbjct: 398 RRSAKSQDMVCERENCSLEDGIQYCKICRLKKCFNAGMDPNK 439
>Z80789-1|CAB02551.1| 708|Caenorhabditis elegans Hypothetical
protein F48C11.2 protein.
Length = 708
Score = 28.3 bits (60), Expect = 4.8
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 386 NKVQSPTNAANNPFLSSAPASN-NQQSIVDLFGPSPADTA 502
N++ SPT AN P S +P S + +L GPSPA A
Sbjct: 623 NEMPSPT-PANAPVPSKSPVSGASNNPFANLGGPSPAPAA 661
>AF016688-7|AAB66080.1| 726|Caenorhabditis elegans Hypothetical
protein F18A12.1 protein.
Length = 726
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 609 LSGPH*RAQAEDPRRTCQRTGCPTKADHL 523
++ P QA PR C+ GC T AD L
Sbjct: 69 MTRPEPVTQASKPRNVCETPGCVTLADQL 97
>U80444-11|AAB37793.2| 304|Caenorhabditis elegans Hypothetical
protein F26B1.1 protein.
Length = 304
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +2
Query: 386 NKVQSPTNAANNPFLSSAPASNNQQSIVDLFG 481
N V++ T AA+ P LSS AS N S DL G
Sbjct: 246 NNVEATTEAASRPSLSSTVAS-NMTSADDLLG 276
>AF106577-11|AAC78185.1| 322|Caenorhabditis elegans Hypothetical
protein F46F5.5 protein.
Length = 322
Score = 27.9 bits (59), Expect = 6.3
Identities = 23/109 (21%), Positives = 44/109 (40%), Gaps = 3/109 (2%)
Frame = +2
Query: 209 QKNVASVMGALSSTSSSFGNAAASTRLDNQPNGAPPLFIDDSLRQQALXXXX---XXMNQ 379
Q + ASV + + RL+ + NGA P F DD +AL +
Sbjct: 16 QVSEASVADVKAQRNGRIAAQKRLERLEAERNGAAPRFTDDQPEPEALRQTSPVPMRARR 75
Query: 380 YKNKVQSPTNAANNPFLSSAPASNNQQSIVDLFGPSPADTASDNEQSFR 526
K+++ +N +P + S ++ + +P+D+ N++ R
Sbjct: 76 AKHQILQLSNTTPSPIIEDKRRSTSEPT----RRQAPSDSKGTNQRHHR 120
>AF039044-12|AAG24130.2| 405|Caenorhabditis elegans Hypothetical
protein F48G7.11 protein.
Length = 405
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Frame = -1
Query: 582 AEDPRRTCQRTGCPTKADHL---KLCSLSLAVSAGLGPNK 472
A+ C+R C K D + K+C L + AG+ PNK
Sbjct: 43 AKSQDMVCERESCSLK-DRIQCCKICRLKMCYDAGMDPNK 81
>AF025468-1|AAF02175.1| 174|Caenorhabditis elegans Serpentine
receptor, class h protein105 protein.
Length = 174
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -1
Query: 591 RAQAEDPRRTCQRTGCPTKADHLKLCSLSLAVSA 490
R+ E+PRRT Q P ++ L +C+ VS+
Sbjct: 35 RSAREEPRRTRQADSSPRRSILLPICNFDFTVSS 68
>Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/67 (22%), Positives = 34/67 (50%)
Frame = +3
Query: 75 VSTRVTFQT*PKHRAVSWTL*KVTSLLSRVKKDLLPILQHKQLVHRRTWLVSWEPYRRRH 254
++T T +T P + T T+ + +K + + + K+ + ++ +W+PYRR
Sbjct: 324 ITTTTTQRTTPYTTTTTTTAAPTTTTMKTIKYPIQEVKKEKK--NYESYYKNWKPYRRPF 381
Query: 255 LLSATRL 275
L+ T++
Sbjct: 382 DLNPTQI 388
>Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/67 (22%), Positives = 34/67 (50%)
Frame = +3
Query: 75 VSTRVTFQT*PKHRAVSWTL*KVTSLLSRVKKDLLPILQHKQLVHRRTWLVSWEPYRRRH 254
++T T +T P + T T+ + +K + + + K+ + ++ +W+PYRR
Sbjct: 324 ITTTTTQRTTPYTTTTTTTAAPTTTTMKTIKYPIQEVKKEKK--NYESYYKNWKPYRRPF 381
Query: 255 LLSATRL 275
L+ T++
Sbjct: 382 DLNPTQI 388
>Z48009-11|CAA88088.2| 467|Caenorhabditis elegans Hypothetical
protein AH6.5 protein.
Length = 467
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +2
Query: 179 ANTPTQTASAQKNVASVMGALSSTSSSFGNAAASTRLDNQPNGAPP 316
A TPT+ Q+NVA M LS+T + N PP
Sbjct: 387 ATTPTKVTLKQRNVAGSMMCLSNTGRDLEAGGDFNHPEINENDLPP 432
>U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore complex
protein protein7 protein.
Length = 1217
Score = 27.5 bits (58), Expect = 8.4
Identities = 19/70 (27%), Positives = 28/70 (40%)
Frame = +2
Query: 74 GIDKGDIPDLTKAPSSLLDALEGHLATLEGKKGSAANTPTQTASAQKNVASVMGALSSTS 253
G IP + + SS AT G G+ + + A K + + SST+
Sbjct: 1052 GPSSSSIPAFSTSNSSSTSGFPSSTATPFGNAGTTSTSGVFGAFGNKPSQPGLSSSSSTN 1111
Query: 254 SSFGNAAAST 283
S FG A A +
Sbjct: 1112 SLFGQAPADS 1121
>AL132862-11|CAB60541.1| 396|Caenorhabditis elegans Hypothetical
protein Y73F8A.16 protein.
Length = 396
Score = 27.5 bits (58), Expect = 8.4
Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 3/91 (3%)
Frame = +2
Query: 203 SAQKNVASVMGALSSTSSSFGNAAASTRLDNQ-PNGAPPLFIDDSLRQQALXXXXXXMNQ 379
S N ++ G L + SS + ST NQ P+ P + QQ NQ
Sbjct: 229 SENYNESTNSGRLQNEISSSIHQFPSTSYQNQYPHAYPTVNTPPIYVQQFTALFDEIHNQ 288
Query: 380 YKNKVQSPTNAANNPFLSSAP--ASNNQQSI 466
+ K + A N +LSS P A N +++I
Sbjct: 289 FDPKTKQNRVAKNVQYLSSVPQFAINQKENI 319
>AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen protein
141 protein.
Length = 314
Score = 27.5 bits (58), Expect = 8.4
Identities = 19/41 (46%), Positives = 20/41 (48%)
Frame = +3
Query: 501 PATTSKASDDLLSLGNPFADMFGAGPQPAPVSAAPTTGPTG 623
PA T A + G P D FG GP P A P TGPTG
Sbjct: 148 PAGTPGAPGAPGNAGAPGQDSFGGGPGP----AGP-TGPTG 183
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,714,242
Number of Sequences: 27780
Number of extensions: 317477
Number of successful extensions: 1095
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1091
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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