Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_N13
         (558 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC000244-1|AAH00244.1|  308|Homo sapiens spastic paraplegia 21, ...   178   9e-45
AK172849-1|BAD18813.1|  308|Homo sapiens protein ( Homo sapiens ...   178   9e-45
AF212231-1|AAK14917.1|  308|Homo sapiens GL010 protein.               178   9e-45

>BC000244-1|AAH00244.1|  308|Homo sapiens spastic paraplegia 21,
           maspardin (autosomal recessive, Mast syndrome) protein.
          Length = 308

 Score =  178 bits (434), Expect = 9e-45
 Identities = 80/138 (57%), Positives = 107/138 (77%)
 Frame = +2

Query: 143 FQQVLGLASRGVRVIAAEPPPYWNMKEWCDGFKRLIDYLELDKVHIFGASLGSFIGQKFA 322
           F+Q+L L   G RVIA + P YW+  E+CDGF++L+D+L+LDKVH+FGASLG F+ QKFA
Sbjct: 60  FRQILALTGWGYRVIALQYPVYWDHLEFCDGFRKLLDHLQLDKVHLFGASLGGFLAQKFA 119

Query: 323 EITRNCPRVASLVLCNTFTDTSVFEYDDSAALFWLLPSLVLMRMLMGNFTTDKVDRRMAQ 502
           E T   PRV SL+LCN+F+DTS+F    +A  FWL+P+ +L ++++GNF++  VD  MA 
Sbjct: 120 EYTHKSPRVHSLILCNSFSDTSIFNQTWTANSFWLMPAFMLKKIVLGNFSSGPVDPMMAD 179

Query: 503 SIDFMVDRLESLNQSELA 556
           +IDFMVDRLESL QSELA
Sbjct: 180 AIDFMVDRLESLGQSELA 197



 Score = 71.7 bits (168), Expect = 2e-12
 Identities = 29/46 (63%), Positives = 37/46 (80%)
 Frame = +3

Query: 3   FRSSVPLRNIVVDSDGSKAWKIFDSGPKSVSCPLICLPPVSGTAAV 140
           FR +VPL+ I+VD D SK W ++D+GP+S+ CPLI LPPVSGTA V
Sbjct: 13  FRGTVPLKKIIVDDDDSKIWSLYDAGPRSIRCPLIFLPPVSGTADV 58


>AK172849-1|BAD18813.1|  308|Homo sapiens protein ( Homo sapiens
           cDNA FLJ24010 fis, clone KAT07969, highly similar to
           Homo sapiens acid cluster protein 33 (ACP33). ).
          Length = 308

 Score =  178 bits (434), Expect = 9e-45
 Identities = 80/138 (57%), Positives = 107/138 (77%)
 Frame = +2

Query: 143 FQQVLGLASRGVRVIAAEPPPYWNMKEWCDGFKRLIDYLELDKVHIFGASLGSFIGQKFA 322
           F+Q+L L   G RVIA + P YW+  E+CDGF++L+D+L+LDKVH+FGASLG F+ QKFA
Sbjct: 60  FRQILALTGWGYRVIALQYPVYWDHLEFCDGFRKLLDHLQLDKVHLFGASLGGFLAQKFA 119

Query: 323 EITRNCPRVASLVLCNTFTDTSVFEYDDSAALFWLLPSLVLMRMLMGNFTTDKVDRRMAQ 502
           E T   PRV SL+LCN+F+DTS+F    +A  FWL+P+ +L ++++GNF++  VD  MA 
Sbjct: 120 EYTHKSPRVHSLILCNSFSDTSIFNQTWTANSFWLMPAFMLKKIVLGNFSSGPVDPMMAD 179

Query: 503 SIDFMVDRLESLNQSELA 556
           +IDFMVDRLESL QSELA
Sbjct: 180 AIDFMVDRLESLGQSELA 197



 Score = 71.7 bits (168), Expect = 2e-12
 Identities = 29/46 (63%), Positives = 37/46 (80%)
 Frame = +3

Query: 3   FRSSVPLRNIVVDSDGSKAWKIFDSGPKSVSCPLICLPPVSGTAAV 140
           FR +VPL+ I+VD D SK W ++D+GP+S+ CPLI LPPVSGTA V
Sbjct: 13  FRGTVPLKKIIVDDDDSKIWSLYDAGPRSIRCPLIFLPPVSGTADV 58


>AF212231-1|AAK14917.1|  308|Homo sapiens GL010 protein.
          Length = 308

 Score =  178 bits (434), Expect = 9e-45
 Identities = 80/138 (57%), Positives = 107/138 (77%)
 Frame = +2

Query: 143 FQQVLGLASRGVRVIAAEPPPYWNMKEWCDGFKRLIDYLELDKVHIFGASLGSFIGQKFA 322
           F+Q+L L   G RVIA + P YW+  E+CDGF++L+D+L+LDKVH+FGASLG F+ QKFA
Sbjct: 60  FRQILALTGWGYRVIALQYPVYWDHLEFCDGFRKLLDHLQLDKVHLFGASLGGFLAQKFA 119

Query: 323 EITRNCPRVASLVLCNTFTDTSVFEYDDSAALFWLLPSLVLMRMLMGNFTTDKVDRRMAQ 502
           E T   PRV SL+LCN+F+DTS+F    +A  FWL+P+ +L ++++GNF++  VD  MA 
Sbjct: 120 EYTHKSPRVHSLILCNSFSDTSIFNQTWTANSFWLMPAFMLKKIVLGNFSSGPVDPMMAD 179

Query: 503 SIDFMVDRLESLNQSELA 556
           +IDFMVDRLESL QSELA
Sbjct: 180 AIDFMVDRLESLGQSELA 197



 Score = 71.7 bits (168), Expect = 2e-12
 Identities = 29/46 (63%), Positives = 37/46 (80%)
 Frame = +3

Query: 3   FRSSVPLRNIVVDSDGSKAWKIFDSGPKSVSCPLICLPPVSGTAAV 140
           FR +VPL+ I+VD D SK W ++D+GP+S+ CPLI LPPVSGTA V
Sbjct: 13  FRGTVPLKKIIVDDDDSKIWSLYDAGPRSIRCPLIFLPPVSGTADV 58


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,857,173
Number of Sequences: 237096
Number of extensions: 1795585
Number of successful extensions: 6942
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6942
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5590411794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)