Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_N13
         (558 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    23   2.8  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   2.8  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   2.8  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    23   2.8  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   2.8  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   4.8  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    21   8.4  
AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength rhodo...    21   8.4  

>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -2

Query: 524 CRP*SQLIEPFFCQLYPL*SFPSA 453
           C P   +I PFFC + PL S   A
Sbjct: 48  CGP--NVINPFFCDMSPLLSLVCA 69


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 418 ILASTFISPYENADGKLHN 474
           I+ ++ +SP +N  G LHN
Sbjct: 348 IMEASILSPNQNVYGDLHN 366


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -3

Query: 115 GKHMSGQLTDLGPLSNIFQAFEPSEST 35
           G H  G L  +  L +IFQ    SE T
Sbjct: 522 GNHEDGYLIGVNNLIDIFQDIRNSEET 548


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -3

Query: 115 GKHMSGQLTDLGPLSNIFQAFEPSEST 35
           G H  G L  +  L +IFQ    SE T
Sbjct: 437 GNHEDGYLIGVNNLIDIFQDIRNSEET 463


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -3

Query: 115 GKHMSGQLTDLGPLSNIFQAFEPSEST 35
           G H  G L  +  L +IFQ    SE T
Sbjct: 756 GNHEDGYLIGVNNLIDIFQDIRNSEET 782


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +3

Query: 57  AWKIFDSGPKSVSCPL 104
           ++K FD GPK+ + P+
Sbjct: 53  SFKTFDKGPKNYTTPV 68


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 6/21 (28%), Positives = 13/21 (61%)
 Frame = -2

Query: 533 ILTCRP*SQLIEPFFCQLYPL 471
           ++ C   + ++ P FCQ+Y +
Sbjct: 110 VINCYYETWVLGPLFCQIYAM 130


>AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength
           rhodopsin protein.
          Length = 152

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 6/21 (28%), Positives = 13/21 (61%)
 Frame = -2

Query: 533 ILTCRP*SQLIEPFFCQLYPL 471
           ++ C   + ++ P FCQ+Y +
Sbjct: 76  VINCYYETWVLGPLFCQIYAM 96


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,616
Number of Sequences: 438
Number of extensions: 3381
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16072521
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)