Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_N10
(639 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence orphan|Schizos... 42 8e-05
SPAC22G7.09c |nup45||nucleoporin Nup45|Schizosaccharomyces pombe... 40 4e-04
SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces pomb... 39 7e-04
SPBC19G7.15 |nup44||nucleoporin Nup44|Schizosaccharomyces pombe|... 38 0.001
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 36 0.007
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 32 0.061
SPBC21D10.05c |ucp3|soc2|GTPase activating protein Ucp3 |Schizos... 31 0.11
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.19
SPCC162.07 |ent1||epsin|Schizosaccharomyces pombe|chr 3|||Manual 30 0.32
SPAC26A3.15c |nsp1||nucleoporin Nsp1|Schizosaccharomyces pombe|c... 29 0.57
SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 28 1.3
SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large subunit|... 27 2.3
SPAC4F10.08 |mug126||sequence orphan|Schizosaccharomyces pombe|c... 27 3.0
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 27 3.0
SPAC13G6.05c |||TRAPP complex subunit Bet3 |Schizosaccharomyces ... 27 3.0
SPAC1805.05 |cki3||serine/threonine protein kinase Cki3|Schizosa... 26 4.0
SPBC1604.01 |mug158|SPBC1677.01c|sulfatase modifying factor 1 re... 26 4.0
SPAC694.02 |||DEAD/DEAH box helicase|Schizosaccharomyces pombe|c... 26 4.0
SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyce... 26 4.0
SPCC613.07 |||zf-HIT|Schizosaccharomyces pombe|chr 3|||Manual 26 4.0
SPAPB1A11.04c |||transcription factor |Schizosaccharomyces pombe... 26 4.0
SPCC320.07c |mde7||RNA-binding protein Mde7|Schizosaccharomyces ... 26 4.0
SPAC23C4.05c |||LEA domain protein|Schizosaccharomyces pombe|chr... 26 5.3
SPBC27B12.13 |tom40|SPBC8D2.22|mitochondrial TOM complex subunit... 26 5.3
SPAC23G3.09 |taf4||transcription factor TFIID complex subunit Ta... 25 7.0
SPAC19D5.06c |din1||Dhp1p-interacting protein Din1|Schizosacchar... 25 7.0
SPAC1687.22c |puf3|SPAC222.02c|RNA-binding protein Puf3 |Schizos... 25 7.0
SPBP35G2.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr... 25 7.0
SPAC824.09c |||GTPase activating protein |Schizosaccharomyces po... 25 7.0
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 25 7.0
SPBC685.03 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 9.2
SPAC17A5.10 |||conserved fungal protein|Schizosaccharomyces pomb... 25 9.2
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 25 9.2
>SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence
orphan|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1563
Score = 41.9 bits (94), Expect = 8e-05
Identities = 42/182 (23%), Positives = 71/182 (39%), Gaps = 2/182 (1%)
Frame = +1
Query: 73 TQLGQIQTGVVSIQETTSNLETTKPQASQVPLPQQQTSLSLNTPTTSQEQSKPELSQFGT 252
T + +T +V++ + ET+ + T++ +NTPTT+ + P GT
Sbjct: 1096 TTVTATETDIVTVTTGYTGTETSTVTVTPTGTATGTTTVVINTPTTTGSEVLPTTGATGT 1155
Query: 253 QSYKPFQSTTQFQSQPXXXXXXXXXXXXXXXXPYGGTSQSGTQTYKPFGSTSQFGTQSYK 432
+ Q TT + QP + + T+T + Q T +
Sbjct: 1156 AGTET-QLTTATEVQPTTGATGTAGTETQVTTGTETQATTATETQATTATEVQTTTGATG 1214
Query: 433 PFGTTTQ--FGTQPVKTAGSSGQFGTQPAKPFGSTSQFGSQPTKPFGSTSQFGTQSYKPF 606
GT TQ T+ T G++G GT+ T+ QPT G+T GT++
Sbjct: 1215 TAGTETQATTATEVQPTTGATGTAGTETQ----VTTATEVQPTT--GATGTAGTETQVTT 1268
Query: 607 GS 612
G+
Sbjct: 1269 GT 1270
Score = 32.3 bits (70), Expect = 0.061
Identities = 37/169 (21%), Positives = 62/169 (36%), Gaps = 1/169 (0%)
Frame = +1
Query: 34 AQEYSPSTSKDSSTQLGQIQTGVVSIQETTSN-LETTKPQASQVPLPQQQTSLSLNTPTT 210
A E +T+ + T G T Q TT+ ++ T Q T+ + PTT
Sbjct: 1195 ATETQATTATEVQTTTGATGTAGTETQATTATEVQPTTGATGTAGTETQVTTATEVQPTT 1254
Query: 211 SQEQSKPELSQFGTQSYKPFQSTTQFQSQPXXXXXXXXXXXXXXXXPYGGTSQSGTQTYK 390
+ +Q T + Q+TT ++Q + + T+
Sbjct: 1255 GATGTAGTETQVTTGTET--QATTATETQATTATEVQTTTGATGTAGTETQATTATEVQP 1312
Query: 391 PFGSTSQFGTQSYKPFGTTTQFGTQPVKTAGSSGQFGTQPAKPFGSTSQ 537
G+T GT++ TT QP T G++G GT+ G+ +Q
Sbjct: 1313 TTGATGTAGTETQ----VTTATEVQP--TTGATGTAGTETQVTTGTETQ 1355
>SPAC22G7.09c |nup45||nucleoporin Nup45|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 425
Score = 39.5 bits (88), Expect = 4e-04
Identities = 39/122 (31%), Positives = 50/122 (40%)
Frame = +1
Query: 220 QSKPELSQFGTQSYKPFQSTTQFQSQPXXXXXXXXXXXXXXXXPYGGTSQSGTQTYKPFG 399
Q+ P S FG + KP Q+ +Q G +Q+ +QT
Sbjct: 89 QAAPGGSLFGASTTKP-QAPGGLFNQNQTQAQPAQAAPTGGLFGLSGQNQTQSQTQPAQA 147
Query: 400 STSQFGTQSYKPFGTTTQFGTQPVKTAGSSGQFGTQPAKPFGSTSQFGSQPTKPFGSTSQ 579
+TS FG + GTT Q + GQF TQPA S FG Q T+P GST
Sbjct: 148 NTSLFGQSN---IGTTGGLFDQNRPNTSTFGQFSTQPA----SAGLFG-QSTQPSGSTG- 198
Query: 580 FG 585
FG
Sbjct: 199 FG 200
Score = 31.9 bits (69), Expect = 0.080
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +1
Query: 352 YGGTSQSGTQTYKPFGSTSQFGTQSYKPFGTTTQFGTQPVKTAGSSG--QFGTQP-AKPF 522
+G +Q+ T FG + KP + FG +P T+ + G FG P A P
Sbjct: 34 FGNNTQANTPASTGFGGVTGGAFGQTKPQTGGSLFGNKPNATSTTPGLNLFGQNPQAAPG 93
Query: 523 GSTSQFGSQPTKP 561
GS FG+ TKP
Sbjct: 94 GSL--FGASTTKP 104
Score = 29.5 bits (63), Expect = 0.43
Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 4/87 (4%)
Frame = +1
Query: 355 GGTSQSGTQTYKPFGSTSQFGTQSYKPFGTTT--QFGTQPVKTAGSSGQFGTQP--AKPF 522
G ++ +G + FG+ +Q T + FG T FG +T GS FG +P
Sbjct: 21 GTSAGTGLFSSNTFGNNTQANTPASTGFGGVTGGAFGQTKPQTGGS--LFGNKPNATSTT 78
Query: 523 GSTSQFGSQPTKPFGSTSQFGTQSYKP 603
+ FG P G S FG + KP
Sbjct: 79 PGLNLFGQNPQAAPGG-SLFGASTTKP 104
Score = 27.5 bits (58), Expect = 1.7
Identities = 22/66 (33%), Positives = 29/66 (43%)
Frame = +1
Query: 394 FGSTSQFGTQSYKPFGTTTQFGTQPVKTAGSSGQFGTQPAKPFGSTSQFGSQPTKPFGST 573
FGST GTQ+ GT+ G T G++ Q T + FG + TKP
Sbjct: 10 FGST---GTQNQNT-GTSAGTGLFSSNTFGNNTQANTPASTGFGGVTGGAFGQTKPQTGG 65
Query: 574 SQFGTQ 591
S FG +
Sbjct: 66 SLFGNK 71
>SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1778
Score = 38.7 bits (86), Expect = 7e-04
Identities = 28/69 (40%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Frame = +1
Query: 370 SGTQTYKPFGSTSQFGTQSYKPFGTTTQFGTQPVKTAGSSGQFGTQPAKP-FGSTSQFGS 546
S T T FGST FG S PFG T G+S T P FG S FGS
Sbjct: 231 SSTNTTSAFGSTPAFGA-STTPFGQNLSGTTNNATPFGTSNATNTTPGSGLFGGGSAFGS 289
Query: 547 QPTKP-FGS 570
T FGS
Sbjct: 290 NTTNTGFGS 298
Score = 34.3 bits (75), Expect = 0.015
Identities = 31/105 (29%), Positives = 41/105 (39%), Gaps = 9/105 (8%)
Frame = +1
Query: 352 YGGTSQSGTQTYKPFGSTSQFGTQSYKPFGTTTQFGTQPVK-TAGSSGQFGTQPAKP-FG 525
+G T G T PFG T + PFGT+ T P G FG+ FG
Sbjct: 239 FGSTPAFGAST-TPFGQNLSGTTNNATPFGTSNATNTTPGSGLFGGGSAFGSNTTNTGFG 297
Query: 526 STSQ------FG-SQPTKPFGSTSQFGTQSYKPFGSTYKPFGSTS 639
S + FG + T ST FG ++ + FGST+
Sbjct: 298 SGTNNASGGLFGQNNNTTSTPSTGLFGGSTFNQQKPAFSGFGSTT 342
>SPBC19G7.15 |nup44||nucleoporin Nup44|Schizosaccharomyces pombe|chr
2|||Manual
Length = 403
Score = 37.9 bits (84), Expect = 0.001
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +1
Query: 481 GSSGQFG----TQPAKPFGSTSQFGSQPTKPFGSTSQFGTQSYKPFGSTYKPFGST 636
GS+G FG T+P PFGS S FGS T G+ G+ S PFG++ FG T
Sbjct: 18 GSTGVFGQSNTTKPTAPFGSGSIFGSTNTN-VGAGGPTGSSSAPPFGNSI--FGKT 70
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 35.5 bits (78), Expect = 0.007
Identities = 47/193 (24%), Positives = 71/193 (36%), Gaps = 10/193 (5%)
Frame = +1
Query: 46 SPSTSKDSSTQLGQIQTGV-VSIQETTSNLETTKPQASQVPLPQQQTSL---SLNTPTTS 213
+P T+ + +T + T ++ +TS+ T S P+ TS S + P TS
Sbjct: 584 TPVTTTNCTTSTSVLYTSTPITSPNSTSSSSTQVSWNSTTPITGTSTSKVTSSTSIPLTS 643
Query: 214 QEQSKPELSQ---FGTQSYKPFQSTTQFQSQPXXXXXXXXXXXXXXXXPYGGTSQSGTQT 384
++ + T S S+T F S+ P TS T T
Sbjct: 644 TNRTSTTFTSSTSISTSSSSTATSSTSFASESSSFYSNVTTSSSTVSTPPPTTSFPSTFT 703
Query: 385 --YKPFGSTSQFGTQSYKPFGTTTQFGTQPVKTAG-SSGQFGTQPAKPFGSTSQFGSQPT 555
+ S S S + +T GT+ +KTA SSG + P STS S +
Sbjct: 704 TSFITSSSLSSIPNNSTEVKTASTSSGTE-IKTASTSSGSSSSSSYTPASSTSTTTSSVS 762
Query: 556 KPFGSTSQFGTQS 594
S+S T S
Sbjct: 763 SRQSSSSSSFTPS 775
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 32.3 bits (70), Expect = 0.061
Identities = 49/206 (23%), Positives = 72/206 (34%), Gaps = 2/206 (0%)
Frame = +1
Query: 4 TGELYDYKKPAQEYSPSTSKDSSTQLGQIQTGVVSIQETTSNLETTKPQASQVPLPQQQT 183
TGE + + S S + +ST L S T+S TT S +P T
Sbjct: 584 TGEFTNTNSGNGDVSGSVTTPTSTPLSNSTVAPTSTF-TSSGFNTT----SGLPTSSAST 638
Query: 184 SLSLNTPTTSQEQSKPELSQFGTQSYKPFQSTTQFQSQPXXXXXXXXXXXXXXXXPYGGT 363
LS +T + + S F T S P S + S T
Sbjct: 639 PLSNSTVAPTSTFTS---SGFNTTSGLPTSSASTPSSNSSIVPTSTFTSSGFNTTSGLPT 695
Query: 364 SQSGTQ-TYKPFGSTSQFGTQSYKPF-GTTTQFGTQPVKTAGSSGQFGTQPAKPFGSTSQ 537
S + T + TS F + + G T + P+ + + G+ ST
Sbjct: 696 SSASTPLSNSTVAPTSTFTSSGFNTTSGLPTSSVSTPLSNSSAYPSSGSSTFSRLSSTLT 755
Query: 538 FGSQPTKPFGSTSQFGTQSYKPFGST 615
PT+ FGSTS T + +P GS+
Sbjct: 756 SSIIPTETFGSTSGSATGT-RPTGSS 780
>SPBC21D10.05c |ucp3|soc2|GTPase activating protein Ucp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 601
Score = 31.5 bits (68), Expect = 0.11
Identities = 42/191 (21%), Positives = 70/191 (36%), Gaps = 18/191 (9%)
Frame = +1
Query: 115 ETTSNLETTKPQASQVPLPQQQTSLSLNTPTTSQEQSKPEL-SQFGTQS--YKPFQSTTQ 285
ETTS+ T P PL + S++ P++ ++ + S +G S Y S++
Sbjct: 277 ETTSSPFFTAPVEPNQPLQPLRPSMTGPVPSSMGSEATLNMPSTYGIDSNLYTNSNSSSI 336
Query: 286 FQSQPXXXXXXXXXXXXXXXXPYGGTSQSGTQTYKPFGSTSQ----FGTQSYKPFGTTTQ 453
Q+ Y +S S T + GS++Q G+ Y
Sbjct: 337 VQNPLQPARTGPAAINYNYTTNYSVSSPSVTNPFFDVGSSTQNASLMGSTGYPSSANNVY 396
Query: 454 FGT--QPVKTAGSSG---------QFGTQPAKPFGSTSQFGSQPTKPFGSTSQFGTQSYK 600
+ Q V T+ S QPA P S SQ+ + ST+ +G +
Sbjct: 397 YENSYQGVGTSMSDNYQLPDMSKLSLNEQPAAPSNSNSQYMNTSMPTLDSTNMYGQSNQD 456
Query: 601 PFGSTYKPFGS 633
P+ + +GS
Sbjct: 457 PYSMSNGVYGS 467
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 30.7 bits (66), Expect = 0.19
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = +1
Query: 85 QIQTGVVSIQETTSNLETTKPQASQVPLPQQQTSLSLNTPTTSQEQSKPE 234
QI T V TTS T P Q PL Q + +SL P + P+
Sbjct: 1317 QIPTAAVKDPSTTSTSFNTAPIPQQAPLENQFSKMSLEPPVRPAVPTSPK 1366
Score = 29.5 bits (63), Expect = 0.43
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Frame = +1
Query: 352 YGGTSQSGTQT-YKPFGSTSQFGTQSYKPFGTTTQFGTQPVKTAGSSG-QFG-TQPAKPF 522
YG + +G Q + +G G +Y+ Q QP AG++ F +QPA F
Sbjct: 12 YGYGANNGVQPGFDSYGMPINQGGMNYQQQTYPYQQPYQPDGYAGNTMLPFQQSQPATQF 71
Query: 523 GSTSQFGSQPTKPFGSTSQFGTQSYKPFG 609
+ + SQPT GS + +G Q + +G
Sbjct: 72 NNGFGYASQPT---GSVADYGQQQQQMYG 97
Score = 28.3 bits (60), Expect = 0.99
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +1
Query: 463 QPVKTAGSSGQF-GTQPAKPFGSTSQFGSQPT 555
QP KT G + Q G +PFG+ F QPT
Sbjct: 178 QPQKTGGFAPQATGFMQTQPFGAAPSFAPQPT 209
>SPCC162.07 |ent1||epsin|Schizosaccharomyces pombe|chr 3|||Manual
Length = 706
Score = 29.9 bits (64), Expect = 0.32
Identities = 28/108 (25%), Positives = 36/108 (33%)
Frame = +1
Query: 94 TGVVSIQETTSNLETTKPQASQVPLPQQQTSLSLNTPTTSQEQSKPELSQFGTQSYKPFQ 273
TG V Q T +TT + P + S S Q+QS P L T S PF
Sbjct: 510 TGYVHPQPTGLQRQTTGYTGNNNPYSRPLQSQSTGILQQQQQQSAPRLEPTKTGSNNPFA 569
Query: 274 STTQFQSQPXXXXXXXXXXXXXXXXPYGGTSQSGTQTYKPFGSTSQFG 417
+ SQ + +Q+ T P G T FG
Sbjct: 570 QFSNLPSQSTAPATKPMKPVRTGDDRFSNIAQA-ISTGNPMG-TDSFG 615
>SPAC26A3.15c |nsp1||nucleoporin Nsp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 29.1 bits (62), Expect = 0.57
Identities = 23/80 (28%), Positives = 36/80 (45%)
Frame = +1
Query: 355 GGTSQSGTQTYKPFGSTSQFGTQSYKPFGTTTQFGTQPVKTAGSSGQFGTQPAKPFGSTS 534
G ++ + T + FGST+ T KP FG + + GS+ G + S +
Sbjct: 77 GNSTNASTSSPFSFGSTNTNNTAGAKPL-----FGG--LGSTGSANSTGDKSKNTASSAT 129
Query: 535 QFGSQPTKPFGSTSQFGTQS 594
G+ T P GST FG+ +
Sbjct: 130 --GAATTNPSGSTFNFGSSN 147
Score = 28.7 bits (61), Expect = 0.75
Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 2/92 (2%)
Frame = +1
Query: 16 YDYKKPAQEYSPSTSKDSSTQLGQIQTGVVSIQETTSNLETTKPQASQVPLPQQQTSLSL 195
+ + KPA + + + + +T TG S + + +T KP A + TS
Sbjct: 270 FSFGKPAGQAASTATDKGTTTTSSAGTGF-SFGKPATTEDTNKPTAPNSAFTKPATSTGD 328
Query: 196 NTPTTS-QEQSKP-ELSQFGTQSYKPFQSTTQ 285
N PT S SKP E + S P + T+
Sbjct: 329 NKPTFSFGNTSKPTENTSTTATSAPPLSNNTK 360
Score = 27.9 bits (59), Expect = 1.3
Identities = 20/78 (25%), Positives = 30/78 (38%), Gaps = 1/78 (1%)
Frame = +1
Query: 358 GTSQSGTQTYKPFGSTSQFGTQSYKPFGTTTQFGTQPVKTAGSSGQFGTQPAKPFGSTSQ 537
G + + T + P G FG+ + + F T G+S T FGST+
Sbjct: 38 GNTNNNTSSTAPSGGL--FGSNNASNTSAPSTFSFGKAATTGNSTNASTSSPFSFGSTNT 95
Query: 538 FGSQPTKP-FGSTSQFGT 588
+ KP FG G+
Sbjct: 96 NNTAGAKPLFGGLGSTGS 113
Score = 27.1 bits (57), Expect = 2.3
Identities = 24/88 (27%), Positives = 30/88 (34%), Gaps = 1/88 (1%)
Frame = +1
Query: 355 GGTSQSGTQTYKPFGSTSQF-GTQSYKPFGTTTQFGTQPVKTAGSSGQFGTQPAKPFGST 531
G SG KP S G + G TA S G FG+ A +
Sbjct: 6 GNNQNSGFSFGKPAQPNSAAQGAATPAATGLFGNTNNNTSSTAPSGGLFGSNNASNTSAP 65
Query: 532 SQFGSQPTKPFGSTSQFGTQSYKPFGST 615
S F G+++ T S FGST
Sbjct: 66 STFSFGKAATTGNSTNASTSSPFSFGST 93
Score = 26.2 bits (55), Expect = 4.0
Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Frame = +1
Query: 394 FGSTSQFGTQSYKPFGTTTQFGTQPVKTAGSSGQFGTQPAKPFGSTSQFGSQPTKPFGST 573
FG+T+ T S P G FG+ + F A G+++ + FGST
Sbjct: 37 FGNTNN-NTSSTAPSGGL--FGSNNASNTSAPSTFSFGKAATTGNSTNASTSSPFSFGST 93
Query: 574 SQFGTQSYKP-FG 609
+ T KP FG
Sbjct: 94 NTNNTAGAKPLFG 106
>SPBC2F12.05c |||sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1310
Score = 27.9 bits (59), Expect = 1.3
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 112 QETTSNLETTKPQAS-QVPLPQQQTSLSLNTPTTSQEQSKPELSQFGTQSYKPFQSTTQ 285
+E+T + + T+ Q + Q LP QQT+ + + S +P Q Q P Q TT+
Sbjct: 709 KESTPSKQPTEGQHTRQESLPSQQTTETKHLRKESIPSKQPTEGQHARQESLPSQQTTE 767
Score = 27.1 bits (57), Expect = 2.3
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 112 QETTSNLETTKPQ-ASQVPLPQQQTSLSLNTPTTSQEQSKPELSQFGTQSYKPFQSTTQ 285
+E+ + + T+ Q A Q LP QQT+ + + S +P Q Q P Q TT+
Sbjct: 677 KESIPSKQPTEGQHARQESLPSQQTTETKHLRKESTPSKQPTEGQHTRQESLPSQQTTE 735
>SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1752
Score = 27.1 bits (57), Expect = 2.3
Identities = 24/87 (27%), Positives = 33/87 (37%), Gaps = 1/87 (1%)
Frame = +1
Query: 367 QSGTQTYKPFGSTSQFGTQS-YKPFGTTTQFGTQPVKTAGSSGQFGTQPAKPFGSTSQFG 543
Q G++ + FG G S YK G + T P +A S G T P+ S
Sbjct: 1510 QGGSEGREGFGDYGLLGAASPYK--GVQSPGYTSPFSSAMSPGYGLTSPSYSPSSPGYST 1567
Query: 544 SQPTKPFGSTSQFGTQSYKPFGSTYKP 624
S P + + SY P +Y P
Sbjct: 1568 SPAYMPSSPSYSPTSPSYSPTSPSYSP 1594
>SPAC4F10.08 |mug126||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 436
Score = 26.6 bits (56), Expect = 3.0
Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 6/88 (6%)
Frame = +1
Query: 40 EYSPSTSKDSSTQLGQIQTG---VVSIQETT---SNLETTKPQASQVPLPQQQTSLSLNT 201
E K S+ Q ++Q + ++QE S + +PQA Q +PQ+ + N
Sbjct: 157 ESQTDKKKTSTVQEEELQNAGKKLETVQENPQAYSKVTQQEPQAGQKAVPQEPQA---NQ 213
Query: 202 PTTSQEQSKPELSQFGTQSYKPFQSTTQ 285
TS Q + + TQ K TTQ
Sbjct: 214 QETSSNQEESSFDRQETQDDKQKPKTTQ 241
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 26.6 bits (56), Expect = 3.0
Identities = 42/194 (21%), Positives = 72/194 (37%), Gaps = 3/194 (1%)
Frame = +1
Query: 64 DSSTQLGQIQTGVVSIQETTSNLETTKPQASQVPLPQQQTSLSLNTPTTSQEQSKPELSQ 243
++S+Q+G+ V S + T P S VP+ Q S++ N SKP++S
Sbjct: 131 ETSSQIGKDNAAPVENVNEKSTSQETAPPVSTVPI--QFGSITRNAAI----PSKPKVS- 183
Query: 244 FGTQSYKPFQSTTQFQSQPXXXXXXXXXXXXXXXXPYGGTSQ-SGTQTYKPFGSTSQFGT 420
G K + + S+ P + S T T P +TS T
Sbjct: 184 -GNMQNK--SGVSSYSSKSQSVNSSVTSNPPHTEEPVAAKPEASSTATKGPRPTTSASNT 240
Query: 421 QSYKPFGTTTQFGTQPVKTAGSSGQFGTQPAKPFGSTSQFGSQPTKPFGSTSQFGTQSYK 600
+ G T + + T + TQ + S S S + P ++S+ Q++
Sbjct: 241 NTSPANGAPTNKPSTDINTTDPA----TQTTQVSASNSPALSGSSTPSNTSSRSNRQNHG 296
Query: 601 PFGST--YKPFGST 636
F Y +G++
Sbjct: 297 NFSEKRHYDRYGNS 310
>SPAC13G6.05c |||TRAPP complex subunit Bet3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 245
Score = 26.6 bits (56), Expect = 3.0
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = +1
Query: 85 QIQTGVVSIQETTSNLETTKPQASQVPLPQQQTSLSLNTPTTSQEQSKPELSQFGTQS 258
Q G S E++ +T+P SQ P + +S + T++Q ++ E S T +
Sbjct: 170 QTSPGKPSTSESSQTDTSTRPANSQTPTTTRASSYTTLVSTSNQVSNEAEASAVETSA 227
>SPAC1805.05 |cki3||serine/threonine protein kinase
Cki3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 439
Score = 26.2 bits (55), Expect = 4.0
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Frame = +1
Query: 46 SPSTSKDSSTQLGQIQTGVVSIQETTSNLETTKPQASQVPLPQQQTSLSLNT-----PTT 210
S +T KD G+ + V Q+ TS+ + +PQ + P PQ ++T P
Sbjct: 360 SVATQKDGIP--GKAASPQVQQQQQTSSAQQQQPQRVEQPAPQTTQPTQVDTQQAAKPAP 417
Query: 211 SQEQSK 228
S+E+S+
Sbjct: 418 SKEKSR 423
>SPBC1604.01 |mug158|SPBC1677.01c|sulfatase modifying factor 1
related|Schizosaccharomyces pombe|chr 2|||Manual
Length = 773
Score = 26.2 bits (55), Expect = 4.0
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +3
Query: 354 WRYKSVWYSNIQTFRKYLTVRNSI 425
W YKSV+ ++ R YL +N +
Sbjct: 244 WEYKSVYDEDLGVHRAYLQAKNEV 267
>SPAC694.02 |||DEAD/DEAH box helicase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1717
Score = 26.2 bits (55), Expect = 4.0
Identities = 10/40 (25%), Positives = 26/40 (65%)
Frame = +2
Query: 44 TLHQRAKIVPHNSDKYRQELYQFKKLHQT*KQQNRKLVKF 163
TL ++ + NS+++++++ ++KK T Q+ +++ KF
Sbjct: 1113 TLVEKEREWRENSEEWKEKMREYKKWQSTANQRAKQMEKF 1152
>SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 964
Score = 26.2 bits (55), Expect = 4.0
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -2
Query: 500 PNWPLLPAVLTG*VPNCVVVPKG 432
P+ PL P+VL G V N +PKG
Sbjct: 221 PSLPLNPSVLQGQVMNNPTIPKG 243
>SPCC613.07 |||zf-HIT|Schizosaccharomyces pombe|chr 3|||Manual
Length = 345
Score = 26.2 bits (55), Expect = 4.0
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +2
Query: 557 NRLEVHLNSELNRTSHLEVLINRLE 631
++L HLNS+ N S +E LINR E
Sbjct: 56 SKLVNHLNSDFNFLSGVERLINRKE 80
>SPAPB1A11.04c |||transcription factor |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 697
Score = 26.2 bits (55), Expect = 4.0
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +1
Query: 148 QASQVPLPQQQTSLSLNTPTTSQ--EQSKPELSQFGTQSYKPFQSTTQFQ 291
Q + + LP + + N P ++ + S PE +Q T S P+Q + Q +
Sbjct: 300 QKTSIQLPCPEPNFLFNQPILTELFDGSLPENTQSDTTSMAPYQRSLQLE 349
>SPCC320.07c |mde7||RNA-binding protein Mde7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 761
Score = 26.2 bits (55), Expect = 4.0
Identities = 24/115 (20%), Positives = 43/115 (37%), Gaps = 5/115 (4%)
Frame = +1
Query: 190 SLNTPTTSQEQSKPELSQFGTQSYKPFQSTTQFQSQPXXXXXXXXXXXXXXXXPYGGTSQ 369
+ N P S+ + L+ TQ+ +P +STT F P GT++
Sbjct: 51 AFNKPPLSRNSTTNPLNLLYTQTQQPARSTTPFLLNPVGSSPGKLPVPSRNNSYLQGTAE 110
Query: 370 SGTQTYKPFGST-----SQFGTQSYKPFGTTTQFGTQPVKTAGSSGQFGTQPAKP 519
S + + + S + + S++ G++ F Q + S T A P
Sbjct: 111 SNSGNFANNSISNNCWNSAYNSNSFEGTGSSPNFPPQNQFLSDSRSSIATLNAIP 165
>SPAC23C4.05c |||LEA domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 431
Score = 25.8 bits (54), Expect = 5.3
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 205 TTSQEQSKPELSQFGTQSYKPFQSTTQFQ 291
T ++E+ K EL FG PF ST F+
Sbjct: 365 TWTEEELKEELESFGELVPVPFSSTKAFE 393
>SPBC27B12.13 |tom40|SPBC8D2.22|mitochondrial TOM complex subunit
Tom40|Schizosaccharomyces pombe|chr 2|||Manual
Length = 344
Score = 25.8 bits (54), Expect = 5.3
Identities = 14/47 (29%), Positives = 20/47 (42%)
Frame = +1
Query: 445 TTQFGTQPVKTAGSSGQFGTQPAKPFGSTSQFGSQPTKPFGSTSQFG 585
T F T P T + G+Q P+ ++ FG +P GS G
Sbjct: 59 TKGFCTSPWFTVSHAFALGSQVLPPYSFSTMFGGEPLFLRGSVDNDG 105
>SPAC23G3.09 |taf4||transcription factor TFIID complex subunit
Taf4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 365
Score = 25.4 bits (53), Expect = 7.0
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +1
Query: 25 KKPAQEYSPSTSKDSSTQLGQIQTGVVSIQETTSNLETTKPQASQV 162
KK + PS S+D L Q + G+++I++ + LE + A ++
Sbjct: 304 KKDSNSLKPS-SRDGVLPLQQEEKGIITIRDALAVLEMDREGAGRI 348
>SPAC19D5.06c |din1||Dhp1p-interacting protein
Din1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 352
Score = 25.4 bits (53), Expect = 7.0
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 3 HW*TL*LQEASSRILSINEQR*FHTTRTNTDRSC 104
HW T + + +S I+ + E+ T+ N DR C
Sbjct: 110 HWETYLVMDPTSGIIMMEERTRSETSYANQDRMC 143
>SPAC1687.22c |puf3|SPAC222.02c|RNA-binding protein Puf3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 732
Score = 25.4 bits (53), Expect = 7.0
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +1
Query: 499 GTQPAKPFGSTSQFGSQPTKPFGSTSQFGTQS 594
GT P F ++S S T P GS Q +S
Sbjct: 46 GTSPTSSFFNSSMISSNYTFPHGSNKQASLES 77
>SPBP35G2.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1060
Score = 25.4 bits (53), Expect = 7.0
Identities = 11/42 (26%), Positives = 20/42 (47%)
Frame = +1
Query: 163 PLPQQQTSLSLNTPTTSQEQSKPELSQFGTQSYKPFQSTTQF 288
P+ +++ SLNT S PE++ T+S +T +
Sbjct: 528 PVSSSKSTASLNTNNNGLRASTPEMANISTRSSSESNNTNSW 569
>SPAC824.09c |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 320
Score = 25.4 bits (53), Expect = 7.0
Identities = 19/67 (28%), Positives = 31/67 (46%)
Frame = +1
Query: 13 LYDYKKPAQEYSPSTSKDSSTQLGQIQTGVVSIQETTSNLETTKPQASQVPLPQQQTSLS 192
LY K A + PS SK ++ + + + + ET KP+ + P+ + SL
Sbjct: 92 LYWEAKLAGGHVPSDSKIATFIKTKYEFKKWVLYPEIPSPETLKPEQNTRPVSEVNASLD 151
Query: 193 LNTPTTS 213
LNT + S
Sbjct: 152 LNTASRS 158
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.4 bits (53), Expect = 7.0
Identities = 25/75 (33%), Positives = 31/75 (41%)
Frame = +1
Query: 16 YDYKKPAQEYSPSTSKDSSTQLGQIQTGVVSIQETTSNLETTKPQASQVPLPQQQTSLSL 195
Y+ A S +TS S+T L GV S T+ NLE+T S TS
Sbjct: 812 YNTSFHAPTVSSTTSSSSTTSLAA-NKGVNSNSITSLNLESTSSVTSTAYTTDSVTS--- 867
Query: 196 NTPTTSQEQSKPELS 240
T TSQ S +S
Sbjct: 868 TTALTSQGPSSSVVS 882
>SPBC685.03 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 452
Score = 25.0 bits (52), Expect = 9.2
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +1
Query: 121 TSNLETTKPQASQVPLPQQQTSLSLNTPTTSQEQSKPELSQFGTQSYKPFQSTT 282
T+N T ++S V + Q +TS S+N+ + S + + + S F +TT
Sbjct: 318 TNNYFMTDVKSSSVVIVQSETSCSINSASMSSNTTYFYWNSTSSLSSSVFTNTT 371
>SPAC17A5.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 224
Score = 25.0 bits (52), Expect = 9.2
Identities = 22/97 (22%), Positives = 37/97 (38%)
Frame = +1
Query: 349 PYGGTSQSGTQTYKPFGSTSQFGTQSYKPFGTTTQFGTQPVKTAGSSGQFGTQPAKPFGS 528
P Q+ T P S+S P + ++PV ++GS + P P
Sbjct: 24 PNSSNGQTSTSAGHPSSSSSTL------PNYAASSLNSRPVSSSGSGNAYSQAPYPPARP 77
Query: 529 TSQFGSQPTKPFGSTSQFGTQSYKPFGSTYKPFGSTS 639
TSQ +P +++ + + +T KP TS
Sbjct: 78 TSQ-RPNSWQPGNASTMYASPPPSSNYNTAKPPYQTS 113
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 25.0 bits (52), Expect = 9.2
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 548 SQLNRLEVHLNSELNRTSHLEVLINRLEA 634
SQLN L+ L +E++ + HL ++ L A
Sbjct: 532 SQLNELKGELQTEISNSEHLSSQLSTLAA 560
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.304 0.120 0.338
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,567,317
Number of Sequences: 5004
Number of extensions: 53108
Number of successful extensions: 166
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 159
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 285732116
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)
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