Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_N08
(451 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0824 - 32243495-32244319,32244449-32244859 58 4e-09
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 53 9e-08
01_01_1152 + 9170628-9171899 52 3e-07
11_01_0771 + 6453130-6454488 48 3e-06
11_01_0767 + 6438648-6438809,6439146-6440000 48 3e-06
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 48 3e-06
11_01_0750 - 6315126-6315896,6316371-6316784 47 6e-06
11_02_0011 - 7337618-7338496,7338596-7338991 47 8e-06
11_02_0012 - 7346282-7347136,7347234-7347593 45 2e-05
11_02_0014 - 7352619-7352918,7353173-7353418 42 2e-04
05_06_0044 - 25150322-25151260 40 7e-04
02_05_0043 - 25366965-25368211,25368555-25369070,25369185-25370091 29 2.3
10_08_0960 - 21853010-21853282,21854078-21854449,21854555-218548... 28 3.0
08_02_0095 - 12285976-12286037,12286111-12287229,12287494-122886... 28 3.0
08_01_0978 + 9841441-9842169,9842303-9842590,9842768-9843612,984... 28 4.0
07_01_0747 - 5724586-5724648,5725229-5725309,5725564-5725656,572... 27 5.3
04_04_1055 + 30444235-30446649 27 7.0
05_07_0209 + 28420008-28421510 27 9.2
04_04_1299 + 32450998-32451134,32451575-32452304,32452856-324530... 27 9.2
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 57.6 bits (133), Expect = 4e-09
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 2/111 (1%)
Frame = +2
Query: 104 ANKIYVGNKYTLDEKFT-ITVRQYQSEVETIDFSDT-KKAADIINQWANEKTRGHIKSPI 277
AN ++V L + + +Y++E + F D ++A IN+W T G IK +
Sbjct: 102 ANGVWVDAALRLKAAYARVVADKYRAEARPVSFRDKLEEARREINEWFESATAGRIKDFL 161
Query: 278 SDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDFHVDSTTIVKKPTMS 430
D +D A L N ++F+G W F+A T + F++ V P MS
Sbjct: 162 PKDAVDRATPAVLGNALYFKGDWESKFDARSTSDDVFYLPDGGHVSAPFMS 212
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 53.2 bits (122), Expect = 9e-08
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Frame = +2
Query: 185 ETIDFSDTKKAADI---INQWANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHWHVP 355
E I + KAA++ +N W + T G IK + ++D L N ++F+G W
Sbjct: 200 EPITHWTSGKAAEVASQVNSWVEKVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEK 259
Query: 356 FNASETKEKDFHVDSTTIVKKPTMS 430
F+AS+TK+ +FH+ V+ P MS
Sbjct: 260 FDASKTKDGEFHLLDGKSVQAPFMS 284
Score = 49.6 bits (113), Expect = 1e-06
Identities = 25/104 (24%), Positives = 48/104 (46%)
Frame = +2
Query: 119 VGNKYTLDEKFTITVRQYQSEVETIDFSDTKKAADIINQWANEKTRGHIKSPISDDTIDP 298
+ + D F +++ + V + +N W + T G IK+ + +I+
Sbjct: 433 IAEDFVADHPFLFLIQEDMTGVVLFVGHVAAEVLGQVNSWVDRVTSGLIKNIATPRSINH 492
Query: 299 NAAAALFNVIFFQGHWHVPFNASETKEKDFHVDSTTIVKKPTMS 430
N L N ++F+G W F+ S+T++ +FH+ V+ P MS
Sbjct: 493 NTKLVLANALYFKGAWAEKFDVSKTEDGEFHLLDGESVQAPFMS 536
>01_01_1152 + 9170628-9171899
Length = 423
Score = 51.6 bits (118), Expect = 3e-07
Identities = 24/89 (26%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Frame = +2
Query: 167 QYQSEVETIDFS-DTKKAADIINQWANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGH 343
+Y + E DF+ ++A + +N + ++ T G I+ + +++D + L N + F+G
Sbjct: 142 RYAAVAEPADFATQPEQARERVNAFVSDATEGLIRDVLPPNSVDSSTVVVLANAVHFKGT 201
Query: 344 WHVPFNASETKEKDFHVDSTTIVKKPTMS 430
W +PF+ S T FH+ V+ P M+
Sbjct: 202 WSLPFHPSATFHAPFHLLDGGAVRAPFMT 230
>11_01_0771 + 6453130-6454488
Length = 452
Score = 48.4 bits (110), Expect = 3e-06
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +2
Query: 209 KKAADIINQWANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDF 388
++A IN WA T I + ++ P A L N I+F+G W PFN S+T+ K F
Sbjct: 171 EEARKQINAWARRATGKLITDVLPPRSVGPETAVVLGNAIYFKGKWDRPFNESDTERKPF 230
Query: 389 H 391
+
Sbjct: 231 Y 231
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 48.0 bits (109), Expect = 3e-06
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = +2
Query: 161 VRQYQSEVETIDFSDTK-KAADIINQWANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQ 337
V Y+ T+DF + +A IN W T+ I I ++ + + N I+F+
Sbjct: 39 VGTYKGAASTVDFKNHPVEARKEINAWVARATKNLITEVIKPESQSVDTRHVVGNAIYFK 98
Query: 338 GHWHVPFNASETKEKDFHVDSTTIVKKPTM 427
G W PF+ S+T E++F + V+ P M
Sbjct: 99 GEWLAPFDKSDTAEREFRRLDGSSVEVPFM 128
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 48.0 bits (109), Expect = 3e-06
Identities = 23/73 (31%), Positives = 37/73 (50%)
Frame = +2
Query: 212 KAADIINQWANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDFH 391
+ A +N W + T G IK + ++D L N ++F+G W F+AS+TK+ +F
Sbjct: 4 EVASQVNSWVDRVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDGEFR 63
Query: 392 VDSTTIVKKPTMS 430
+ V P MS
Sbjct: 64 LLDGKSVLAPFMS 76
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 47.2 bits (107), Expect = 6e-06
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = +2
Query: 170 YQSEVETIDFSDTKK-AADIINQWANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHW 346
Y S + DF + + A D IN W + T+G + + + TID N L + ++F+G W
Sbjct: 126 YGSAAKKADFKNKPEDAPDQINSWVKDSTKGTVTTLLPAGTIDQNTGLVLGSALYFRGRW 185
Query: 347 HVPFNASETKEKDFHVDSTTIVKKP 421
+ T E+ F+ T V+ P
Sbjct: 186 LDRDDLRRTTEQKFYCLDGTSVEVP 210
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 46.8 bits (106), Expect = 8e-06
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = +2
Query: 170 YQSEVETIDFS-DTKKAADIINQWANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHW 346
Y++ +F K++ IN+W ++ T I + D ++ + A L N I+F+G W
Sbjct: 120 YKAVTRAANFQRQPKRSRKKINKWVSKATNKLIPEILPDGSVHVDTALVLVNAIYFKGKW 179
Query: 347 HVPFNASETKEKDFHVDSTTIVKKPTMS 430
PF S T FH + V P MS
Sbjct: 180 SNPFPRSSTTTGKFHRLDGSSVDVPFMS 207
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 45.2 bits (102), Expect = 2e-05
Identities = 23/74 (31%), Positives = 34/74 (45%)
Frame = +2
Query: 209 KKAADIINQWANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDF 388
K + IN+W ++ T I+ + D ++ A L N I+F+G W PF T F
Sbjct: 122 KSSRKKINKWVSKATNKLIREILPDGSVHGGTALVLVNAIYFKGKWSNPFPRERTTTGKF 181
Query: 389 HVDSTTIVKKPTMS 430
H + V P MS
Sbjct: 182 HRLDGSSVDAPFMS 195
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 41.9 bits (94), Expect = 2e-04
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +2
Query: 203 DTKKAADIINQWANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEK 382
+ KK+ IN+W ++ T I + D ++ L N I+F+G W PF T
Sbjct: 82 EPKKSRKKINEWVSKATNKLIPEILPDGSVHRLTTLVLVNAIYFKGKWSDPFPRESTTTG 141
Query: 383 DFH-VDSTTI 409
FH +D +++
Sbjct: 142 KFHRLDGSSV 151
>05_06_0044 - 25150322-25151260
Length = 312
Score = 40.3 bits (90), Expect = 7e-04
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 11/79 (13%)
Frame = +2
Query: 227 INQWANEKTRGHIKSPIS---DDTIDPN--------AAAALFNVIFFQGHWHVPFNASET 373
IN+W + +T G +K +S DD D + A+ L N ++F +W PF T
Sbjct: 40 INEWFSSQTGGFVKDILSNSIDDDDDGSGGGGGAISASVFLANSLYFNAYWDHPFFPHLT 99
Query: 374 KEKDFHVDSTTIVKKPTMS 430
+E DFHV V+ P M+
Sbjct: 100 EEGDFHVSPDHDVRVPFMA 118
>02_05_0043 - 25366965-25368211,25368555-25369070,25369185-25370091
Length = 889
Score = 28.7 bits (61), Expect = 2.3
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -3
Query: 68 FYLS*CTDWQPRYNLHCLKTC 6
+ L CTD+ P+Y HC +C
Sbjct: 296 YLLDGCTDYNPKYKEHCSTSC 316
>10_08_0960 -
21853010-21853282,21854078-21854449,21854555-21854862,
21854946-21855102
Length = 369
Score = 28.3 bits (60), Expect = 3.0
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2
Query: 239 ANEKTRGHIKSPISDDTIDPNAAAA 313
A + RG KSP DD I+PNAAAA
Sbjct: 241 AAAQARGS-KSPEDDDNINPNAAAA 264
>08_02_0095 -
12285976-12286037,12286111-12287229,12287494-12288604,
12288695-12288757,12288851-12288913,12289268-12289318,
12289538-12289617,12290078-12290164,12290349-12290435,
12290889-12290975,12292106-12292308,12292756-12292922
Length = 1059
Score = 28.3 bits (60), Expect = 3.0
Identities = 17/85 (20%), Positives = 37/85 (43%)
Frame = -1
Query: 319 EERGSCIRIYGVIRDWRFNMSSGLLISPLINDVSCFFGIAEVNSFNFALVLTDSDREFLI 140
EE G CI R R+NM + + + +C FG A + + F + +F +
Sbjct: 625 EEYGDCISFDTTYRTNRYNMPFAPFVGVIGHGTTCLFGCAFLEA-EFESLWPQMIEKFNL 683
Query: 139 QSIFISDVDFIGHSEVIRIHLRERF 65
Q++ + + ++ + ++ + F
Sbjct: 684 QNVNYLKIMWKNRAQFVPVYFKYDF 708
>08_01_0978 +
9841441-9842169,9842303-9842590,9842768-9843612,
9843941-9844223,9844303-9844416
Length = 752
Score = 27.9 bits (59), Expect = 4.0
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +2
Query: 167 QYQSEVETIDFSDTKKA-ADIINQWANEKTRGHIKSPISDDTID-PNAA 307
++ E E + S+T++ ADI QWA R +K SD+T+ PN A
Sbjct: 188 EWDKEDEAVAESNTQQVLADIPVQWARNWARARVKKN-SDETLSFPNPA 235
>07_01_0747 -
5724586-5724648,5725229-5725309,5725564-5725656,
5725775-5725929,5726023-5726131,5726291-5726481,
5727463-5727614,5728453-5728728,5729415-5729587,
5730023-5730298,5730839-5730958,5731051-5731176,
5731629-5731970
Length = 718
Score = 27.5 bits (58), Expect = 5.3
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
Frame = -1
Query: 430 THGWL---LHDGCRVNMEIFLFSFTCVE 356
T WL L GCRV ++ FLFSF E
Sbjct: 178 TSEWLNEVLPSGCRVGIDPFLFSFDAAE 205
>04_04_1055 + 30444235-30446649
Length = 804
Score = 27.1 bits (57), Expect = 7.0
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Frame = +3
Query: 186 KLLTSAIPKKQLTSLISGLM------RRPEDILNLQSLMTP*IRMQLPRSSMLYSSRVTG 347
+LL A+P+ T L + L+ PE+ L L +L+ R + YS+ +T
Sbjct: 55 RLLLEALPRPPPTLLCNALLIAYAARALPEEALRLYALLNHAARPPVRSDHYTYSAALTA 114
Query: 348 TCLSTQVKLKRKISMLTLQPS*RSQP 425
S +++L R + L+ + RS P
Sbjct: 115 CARSRRLRLGRSVHAHMLRRA-RSLP 139
>05_07_0209 + 28420008-28421510
Length = 500
Score = 26.6 bits (56), Expect = 9.2
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +2
Query: 74 SEMNPDYFTMANKIYVGNKYTLDEKFTITVRQYQSEVETID 196
+ MNP FT+ + NK +L E+FT ++ Y S ++++
Sbjct: 310 ASMNPRVFTVVEQEADHNKSSLLERFTNSLFYYASMFDSLE 350
>04_04_1299 +
32450998-32451134,32451575-32452304,32452856-32453053,
32453398-32454065,32454555-32454978,32455917-32456009,
32456101-32456295,32456378-32456470,32456718-32456930,
32457015-32457104,32457239-32457400
Length = 1000
Score = 26.6 bits (56), Expect = 9.2
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 164 RQYQSEVETIDFSDTKKAADIINQWANE 247
R Y SE+E + + K AAD +WA++
Sbjct: 524 RGYLSEIEKVAVAQRKLAADKFRKWASK 551
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,120,579
Number of Sequences: 37544
Number of extensions: 231288
Number of successful extensions: 620
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 620
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 871620292
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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