Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_N08
         (451 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.        25   0.29 
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    23   2.0  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   3.6  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      22   3.6  

>AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.
          Length = 62

 Score = 25.4 bits (53), Expect = 0.29
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +2

Query: 50  YISLSKTFSEMNPDYFTMANKIYVGNKY 133
           +IS + +F EM PDY    + + V + Y
Sbjct: 29  FISGTSSFHEMRPDYLLPKDVVVVSSNY 56


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -1

Query: 175 LVLTDSDREFLIQSIFISDVDFIGHSEVIRIHLRE 71
           L+LT+SD +   Q I   DV+   +SEV +   +E
Sbjct: 366 LILTESDTKLSSQGILGEDVE--NNSEVSKSRTKE 398


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
 Frame = +3

Query: 90  ITSLWPIKSTSEINIL------WMRNSRSLSVSTKAKLKLLTSAIPKKQLTSL 230
           +TS+    +T  INIL      +++NS+   V     L++L   + KKQL SL
Sbjct: 329 LTSISVESNTMFINILKFLKQKYVKNSKLEKVIKHDILRMLIIDLRKKQLKSL 381


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +3

Query: 327 YSSRVTGTCLSTQVKLKRKISMLTLQP 407
           Y+  V G  LST++ LKR       QP
Sbjct: 372 YTCDVCGKTLSTKLTLKRHKEQQHFQP 398


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,856
Number of Sequences: 438
Number of extensions: 2528
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11820384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)