Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_M23
(507 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0010 + 30990002-30990273,30990372-30990488,30990581-309906... 140 8e-34
07_01_0071 - 522920-523063,524125-524212,524289-524677 138 2e-33
03_06_0007 - 30975910-30975921,30976660-30976747,30976850-309769... 113 6e-26
11_04_0056 + 12942802-12942920,12943022-12943115 61 4e-10
07_01_0444 + 3357048-3357425,3357841-3357969,3358165-3358284,335... 31 0.53
05_03_0238 - 10783451-10783735,10784686-10785762 29 1.6
01_06_0707 + 31355929-31356244,31356766-31356992,31357081-313572... 29 1.6
05_05_0082 + 22252993-22255617 29 2.1
08_01_0033 + 244930-245105,245297-245344,245835-246539,246652-24... 28 3.7
05_04_0347 + 20479682-20479753,20480136-20480813,20481143-204821... 28 3.7
09_04_0613 + 18953761-18953932,18954672-18954799,18954885-189549... 27 6.5
>03_06_0010 +
30990002-30990273,30990372-30990488,30990581-30990668,
30991505-30991648
Length = 206
Score = 140 bits (338), Expect = 8e-34
Identities = 65/127 (51%), Positives = 85/127 (66%)
Frame = -1
Query: 507 RCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXX 328
R N P+ GP HFR+P+KILW+TVRGMIPHKT+RG+ AL RL+ Y+G PPP+D
Sbjct: 66 RMNTKPSHGPIHFRSPAKILWRTVRGMIPHKTKRGEAALARLKAYEGVPPPYDRTKRMVI 125
Query: 327 XXXXXVFCLKPGRKYCHVGRLSHEVGWKYRDVVRKLEDKRKVKAIKLISYERKLKKITKE 148
V L+PG KYC +G+LS EVGW Y D +R+LE+KRK KA ++L K+ +
Sbjct: 126 PDALKVLRLQPGHKYCLLGQLSKEVGWNYYDTIRELEEKRKEKAKVAYDRRKQLAKLRVK 185
Query: 147 AGEKVAK 127
A EK A+
Sbjct: 186 A-EKAAE 191
>07_01_0071 - 522920-523063,524125-524212,524289-524677
Length = 206
Score = 138 bits (334), Expect = 2e-33
Identities = 63/119 (52%), Positives = 82/119 (68%)
Frame = -1
Query: 507 RCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXX 328
R N P+ GP HFRAPS+I W+TVRGMIPHKT RG+ AL L+ +DG PPP+D
Sbjct: 66 RMNTKPSHGPIHFRAPSRIFWRTVRGMIPHKTPRGEAALANLKAFDGVPPPYDRTKRMVV 125
Query: 327 XXXXXVFCLKPGRKYCHVGRLSHEVGWKYRDVVRKLEDKRKVKAIKLISYERKLKKITK 151
V L+PG KYC +G+LS EVGW Y D +R+LE+KRK KA ++YER+ K++T+
Sbjct: 126 PDALKVLRLQPGHKYCLLGQLSKEVGWNYHDTIRELEEKRKEKA--KVAYERR-KQLTR 181
>03_06_0007 -
30975910-30975921,30976660-30976747,30976850-30976966,
30977081-30977154
Length = 96
Score = 113 bits (273), Expect = 6e-26
Identities = 49/92 (53%), Positives = 62/92 (67%)
Frame = -1
Query: 501 NVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXX 322
N P+ GP HFR+P+KILW+TVRGMIPHKT+RG+ AL RL+ Y+ PP+D
Sbjct: 2 NTKPSHGPIHFRSPAKILWRTVRGMIPHKTKRGEAALARLKAYEVVTPPYDRTKRMVIPD 61
Query: 321 XXXVFCLKPGRKYCHVGRLSHEVGWKYRDVVR 226
V L+PG KYC +G+LS EVGW Y D +R
Sbjct: 62 ALKVLRLQPGHKYCLLGQLSKEVGWNYYDTIR 93
>11_04_0056 + 12942802-12942920,12943022-12943115
Length = 70
Score = 61.3 bits (142), Expect = 4e-10
Identities = 27/56 (48%), Positives = 34/56 (60%)
Frame = -1
Query: 408 RGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXVFCLKPGRKYCHVGRLSHEVGWKY 241
RG+ AL RL+ Y+G PPP+D V L+PG KYC +G+LS EVGW Y
Sbjct: 9 RGEAALARLKAYEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLLGQLSKEVGWNY 64
>07_01_0444 +
3357048-3357425,3357841-3357969,3358165-3358284,
3358661-3358753,3358935-3359014,3359180-3359293,
3359530-3359603,3359757-3359833,3360558-3360641,
3360732-3360824,3360901-3361008,3361130-3361204,
3361507-3361911
Length = 609
Score = 31.1 bits (67), Expect = 0.53
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = -1
Query: 258 EVGWKYRDVVRKLEDKRKVKAIKLISYERKLKKITKEAGEKVAKA 124
+VG + R RK E+K+KVKA K + + K+ K K+ +K+AKA
Sbjct: 562 KVGPEERKAARK-ENKKKVKAEKREARKDKIPKAEKKKRKKMAKA 605
>05_03_0238 - 10783451-10783735,10784686-10785762
Length = 453
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -1
Query: 270 RLSHEVGWKYRDVVRKLEDKRKVKAIKLISYERKLKKITKEAGE 139
+L +E+ RD+ ++ EDK IK+ + E K K+ K E
Sbjct: 177 KLGNEIDKTRRDITKQFEDKGNKLEIKMKALEGKTDKLDKSLAE 220
>01_06_0707 +
31355929-31356244,31356766-31356992,31357081-31357257,
31357355-31357510,31357778-31358054,31358192-31358306,
31360349-31360634,31361196-31361381,31361663-31361833,
31362307-31362426
Length = 676
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -1
Query: 468 RAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFD 349
R P +I+ VRGM+P K G+ L+ Y G P +
Sbjct: 619 RIPERIIEHAVRGMLP-KGRLGRRLFTHLKVYKGAEHPHE 657
>05_05_0082 + 22252993-22255617
Length = 874
Score = 29.1 bits (62), Expect = 2.1
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 249 WKYRDVVRKLEDKRKVK 199
WK RD VRKL D RKVK
Sbjct: 721 WKERDEVRKLMDYRKVK 737
>08_01_0033 + 244930-245105,245297-245344,245835-246539,246652-246796,
246893-247240,247882-248721,248786-248832,249470-249596,
249672-249836,249973-251370,251453-251713,251802-252161
Length = 1539
Score = 28.3 bits (60), Expect = 3.7
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Frame = -1
Query: 258 EVGWKYRDVVRKLEDKRKVKAIKLISYERKLKKITK--EAG-EKVAKATAPFTTVVQSYG 88
++ W Y+D++ ++L ++R+L ++TK AG E+V PF TVV++
Sbjct: 889 DINWSYQDLL-----------LELYLWDRRLDQLTKCVSAGQERVVSCKDPFDTVVKNIR 937
Query: 87 YN*D*EDK 64
N + E+K
Sbjct: 938 VNQEIENK 945
>05_04_0347 +
20479682-20479753,20480136-20480813,20481143-20482195,
20482345-20482406,20482491-20482541,20482635-20482719,
20483253-20483342,20483472-20483563,20483704-20483728
Length = 735
Score = 28.3 bits (60), Expect = 3.7
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = -1
Query: 501 NVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPP 355
NV R P FR P+K + +T R I R ++T PPP
Sbjct: 652 NVRANRVPESFRKPNKGIQETARSQISSSKSATPAQTRSIKTRAPNPPP 700
>09_04_0613 +
18953761-18953932,18954672-18954799,18954885-18954956,
18955033-18955146,18955547-18955615,18955691-18955747,
18956262-18956315,18956387-18956449,18956543-18956605,
18956803-18956967,18957111-18957266,18957315-18957416
Length = 404
Score = 27.5 bits (58), Expect = 6.5
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -1
Query: 204 VKAIKLIS-YERKLKKITKEAGEKVAKATAPFTTVVQSY 91
VKA K+ Y ++ KK++K ++VAKAT P ++ Y
Sbjct: 308 VKAHKIADPYFQEAKKVSKPYIDQVAKATKPHVEKIRIY 346
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,472,222
Number of Sequences: 37544
Number of extensions: 285838
Number of successful extensions: 820
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 816
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1083123860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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