Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_M21
(598 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_1066 + 30098780-30098866,30099139-30099225,30099318-300994... 262 1e-70
11_04_0205 + 14860857-14861534,14862585-14862975,14863069-148631... 259 1e-69
12_02_0028 - 12437332-12437576,12438436-12438537,12438619-124390... 233 8e-62
05_04_0394 - 20906923-20907146,20907251-20907340,20908380-209087... 227 5e-60
01_06_1521 + 37956131-37957204,37958560-37958962,37959370-379594... 222 1e-58
12_01_0818 + 7524549-7524747,7524855-7525863,7525964-7526108,752... 42 3e-04
01_05_0572 + 23356737-23357705,23357811-23357957,23358048-23358443 33 0.23
01_06_1668 + 38998348-38998434,38999234-38999300,38999377-389994... 28 4.9
03_04_0198 - 18381668-18381830,18381903-18382060,18382164-183821... 28 6.5
09_04_0518 - 18261420-18261953,18262054-18262626,18262736-182629... 27 8.6
>03_05_1066 +
30098780-30098866,30099139-30099225,30099318-30099439,
30099580-30099656,30100135-30100259,30100497-30100589,
30100840-30100932,30101016-30101213,30101337-30101441,
30101535-30101600,30101808-30101885,30102144-30102233,
30102325-30102448,30102590-30102741
Length = 498
Score = 262 bits (643), Expect = 1e-70
Identities = 118/198 (59%), Positives = 154/198 (77%)
Frame = +3
Query: 3 DPELFNLITKEKKRQQAGLEMIASENFTSVPVLQCLSSCLHNKYSEGMPYQRYYGGNEFI 182
DPE+ ++I EK RQ GLE+I SENFTSV V+Q + S + NKYSEG P RYYGGNE+I
Sbjct: 42 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI 101
Query: 183 DEIEILAQNRSLETYKLNPEEWGVNVQPYSGSPANFAVYTGVVEPHGRIMGLDLPDGGHL 362
D E L Q R+LE ++L+P +WGVNVQP SGSPANF VYT +++PH RIM LDLP GGHL
Sbjct: 102 DMAESLCQKRALEAFRLDPAKWGVNVQPLSGSPANFHVYTALLKPHERIMALDLPHGGHL 161
Query: 363 THGFFTANKKISATSIFFESMPYKVDPTTGLIDYDKLAETAKLFKPRVIIAGMSCYSRCL 542
+HG+ T KKISA SIFFE+MPY++D +TGLIDYD++ ++A LF+P++I+AG S Y+R
Sbjct: 162 SHGYQTDTKKISAVSIFFETMPYRLDESTGLIDYDQMEKSAVLFRPKLIVAGASAYARLY 221
Query: 543 DYERFRQIADENGAYLMA 596
DY+R R++ D+ A L+A
Sbjct: 222 DYDRMRKVCDKQKAILLA 239
>11_04_0205 +
14860857-14861534,14862585-14862975,14863069-14863170,
14863438-14863682
Length = 471
Score = 259 bits (634), Expect = 1e-69
Identities = 120/198 (60%), Positives = 152/198 (76%), Gaps = 1/198 (0%)
Frame = +3
Query: 3 DPELFNLITKEKKRQQAGLEMIASENFTSVPVLQCLSSCLHNKYSEGMPYQRYYGGNEFI 182
DP + +L+ +EK+RQ++G+E+IASENFTS V++ L S L NKYSEGMP RYYGGN+ I
Sbjct: 16 DPLVHDLLEREKRRQRSGIELIASENFTSFAVMEALGSALTNKYSEGMPGARYYGGNDVI 75
Query: 183 DEIEILAQNRSLETYKLNPEEWGVNVQPYSGSPANFAVYTGVVEPHGRIMGLDLPDGGHL 362
DEIE L ++R+L ++L+ WGVNVQPYSGSPA FA YT ++ PH RIMGLDLP GGHL
Sbjct: 76 DEIENLCRDRALAAFRLDAASWGVNVQPYSGSPATFAAYTALLNPHDRIMGLDLPSGGHL 135
Query: 363 THGFFTA-NKKISATSIFFESMPYKVDPTTGLIDYDKLAETAKLFKPRVIIAGMSCYSRC 539
THG++TA KKISATSI+FES+PYKV TG IDY+KL E A F+P++II G S Y R
Sbjct: 136 THGYYTAGGKKISATSIYFESLPYKVSAATGYIDYEKLEEKALDFRPKLIICGGSAYPRD 195
Query: 540 LDYERFRQIADENGAYLM 593
DY + R +AD+ GA L+
Sbjct: 196 WDYAKLRAVADKVGALLL 213
>12_02_0028 -
12437332-12437576,12438436-12438537,12438619-12439009,
12439996-12440532
Length = 424
Score = 233 bits (570), Expect = 8e-62
Identities = 109/166 (65%), Positives = 129/166 (77%), Gaps = 1/166 (0%)
Frame = +3
Query: 99 LQCLSSCLHNKYSEGMPYQRYYGGNEFIDEIEILAQNRSLETYKLNPEEWGVNVQPYSGS 278
++ L S L NKYSEGMP RYYGGNE IDE+E L + R+L + L+PE WGVNVQPYSGS
Sbjct: 1 MEALGSPLTNKYSEGMPGSRYYGGNEVIDEVEELCRARALAAFHLDPEAWGVNVQPYSGS 60
Query: 279 PANFAVYTGVVEPHGRIMGLDLPDGGHLTHGFFTA-NKKISATSIFFESMPYKVDPTTGL 455
PANFA YTG+++PH RIMGLDLP GGHLTHG++TA KKISATSI+FES+PYKV TG
Sbjct: 61 PANFAAYTGLLQPHERIMGLDLPSGGHLTHGYYTAGGKKISATSIYFESLPYKVSSETGY 120
Query: 456 IDYDKLAETAKLFKPRVIIAGMSCYSRCLDYERFRQIADENGAYLM 593
+DYDKL E A F+P++II G S Y R DY RFR IAD+ GA L+
Sbjct: 121 VDYDKLEEKAMDFRPKLIICGGSAYPRDWDYARFRAIADKCGAMLL 166
>05_04_0394 -
20906923-20907146,20907251-20907340,20908380-20908785,
20909264-20910247
Length = 567
Score = 227 bits (555), Expect = 5e-60
Identities = 107/198 (54%), Positives = 142/198 (71%), Gaps = 1/198 (0%)
Frame = +3
Query: 3 DPELFNLITKEKKRQQAGLEMIASENFTSVPVLQCLSSCLHNKYSEGMPYQRYYGGNEFI 182
DP++ L+ +E++RQ G+E+IASEN+ VL L S L NKYSEG+P RYY GN+ I
Sbjct: 118 DPDVHELMERERRRQAGGVELIASENYACRAVLDALGSHLTNKYSEGLPGARYYCGNQHI 177
Query: 183 DEIEILAQNRSLETYKLNPEEWGVNVQPYSGSPANFAVYTGVVEPHGRIMGLDLPDGGHL 362
D IE L +R+L + L+P WGVNVQPYS + ANFAVYTG++ P+ RIMGLD P GGH+
Sbjct: 178 DAIERLCCDRALAAFGLDPSRWGVNVQPYSCTSANFAVYTGLLLPNDRIMGLDSPSGGHV 237
Query: 363 THGFFT-ANKKISATSIFFESMPYKVDPTTGLIDYDKLAETAKLFKPRVIIAGMSCYSRC 539
+HG++T + KK+S SIFFE++ Y+V+P TG IDYDK+ E A F P+++I G S Y R
Sbjct: 238 SHGYYTPSGKKVSGASIFFENLSYRVNPHTGYIDYDKVEEKAVDFHPKILICGASSYPRD 297
Query: 540 LDYERFRQIADENGAYLM 593
DY R R +AD+ GA LM
Sbjct: 298 WDYARMRLVADKCGAVLM 315
>01_06_1521 +
37956131-37957204,37958560-37958962,37959370-37959471,
37959569-37959792
Length = 600
Score = 222 bits (543), Expect = 1e-58
Identities = 110/198 (55%), Positives = 138/198 (69%), Gaps = 1/198 (0%)
Frame = +3
Query: 3 DPELFNLITKEKKRQQAGLEMIASENFTSVPVLQCLSSCLHNKYSEGMPYQRYYGGNEFI 182
DP++ L+ E+ RQ G+E+IASENF VL+ L S L NKYSEG P RYYGGN+ I
Sbjct: 148 DPDVHALMELERDRQVRGIELIASENFVCRAVLEALGSHLTNKYSEGHPGARYYGGNQHI 207
Query: 183 DEIEILAQNRSLETYKLNPEEWGVNVQPYSGSPANFAVYTGVVEPHGRIMGLDLPDGGHL 362
D IE L R+L + L+P WGVNVQPYS + AN AVYTG++ P RIMGL+ P GGH+
Sbjct: 208 DGIERLCHERALAAFGLDPACWGVNVQPYSCTSANLAVYTGLLLPKDRIMGLEPPSGGHV 267
Query: 363 THGFFT-ANKKISATSIFFESMPYKVDPTTGLIDYDKLAETAKLFKPRVIIAGMSCYSRC 539
+HG++T + KK+S SIFFES+ YKV+P TG IDYDKL E A F P+++I G S Y R
Sbjct: 268 SHGYYTPSGKKVSGASIFFESLSYKVNPQTGYIDYDKLEERAMDFHPKILICGGSSYPRE 327
Query: 540 LDYERFRQIADENGAYLM 593
D+ R R IAD+ GA LM
Sbjct: 328 WDFARMRLIADKCGAVLM 345
>12_01_0818 + 7524549-7524747,7524855-7525863,7525964-7526108,
7526206-7526295,7526404-7526553,7527333-7528094,
7528177-7528496,7528581-7528707,7528792-7528959,
7529054-7530466,7530563-7530823,7530983-7531144,
7531976-7532121,7532601-7532667,7533483-7533587
Length = 1707
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Frame = +3
Query: 333 GLDLPDGGHLTHGFFTANKKISATSIFFE-SMPYKVDPTTG 452
GL+LP GGH++ + T + K+S+ S+F E M Y V+P TG
Sbjct: 1611 GLELPSGGHVSCRYCTPSGKLSSASVFIEMEMSYMVNPQTG 1651
>01_05_0572 + 23356737-23357705,23357811-23357957,23358048-23358443
Length = 503
Score = 32.7 bits (71), Expect = 0.23
Identities = 20/70 (28%), Positives = 37/70 (52%)
Frame = +1
Query: 148 HIKGTMAEMNSLMK*KYWHKIGHWKHTS*ILKNGE*MFNLIQGRQQTLLFIRVLLNRMVE 327
HIK + E N + K+W ++GH + +K + +F+ +G L FI+ +L R +
Sbjct: 370 HIKYNVDESNGELNSKFWQEVGHIECVESSIK--KVVFDQFRGGANELEFIKFILER-AQ 426
Query: 328 LWD*IYLMVD 357
+ D + +VD
Sbjct: 427 MLDKMVFVVD 436
>01_06_1668 +
38998348-38998434,38999234-38999300,38999377-38999435,
38999636-38999711,38999856-38999930,39000007-39000094,
39000261-39000486,39000689-39000804,39001172-39001383,
39001882-39001916,39002005-39002107,39002645-39002753,
39002838-39003036
Length = 483
Score = 28.3 bits (60), Expect = 4.9
Identities = 22/95 (23%), Positives = 41/95 (43%), Gaps = 4/95 (4%)
Frame = +3
Query: 150 YQRYYGGNEFIDEIEILAQNRSLETYKLNPEEWGVNVQP----YSGSPANFAVYTGVVEP 317
Y RY E + + A S+ ++ P+ G NV + NF + G+ EP
Sbjct: 67 YHRYKEDIELMASLGFRAYRFSISWPRIFPDGLGKNVNEQGVAFYNDLINFMIEKGI-EP 125
Query: 318 HGRIMGLDLPDGGHLTHGFFTANKKISATSIFFES 422
+ + DLP T G + ++K + +++ E+
Sbjct: 126 YATLYHWDLPHNLQQTVGGWLSDKIVEYFALYAEA 160
>03_04_0198 -
18381668-18381830,18381903-18382060,18382164-18382199,
18382344-18382439,18382632-18382709,18382921-18383073,
18383261-18383365
Length = 262
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 144 MPYQR--YYGGNEFIDEIEILAQNRSLETYKLNP 239
+PY+ +Y G ++ E+LA++R L +YK+ P
Sbjct: 126 VPYEETGWYDGQMWVKPPEVLARDRLLGSYKVKP 159
>09_04_0518 -
18261420-18261953,18262054-18262626,18262736-18262948,
18263379-18263510,18263591-18263731,18263899-18264120
Length = 604
Score = 27.5 bits (58), Expect = 8.6
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +3
Query: 168 GNEFIDEIEILAQNRSLETYKLNPEEWGVNVQPYSGSPANFAVYTGV 308
G+E IDEIE A++ + TY+L +WG + G P V TG+
Sbjct: 283 GHENIDEIEEKAKSLATCTYELR-TQWGNEIGVKYGCPVE-DVITGL 327
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,547,788
Number of Sequences: 37544
Number of extensions: 327437
Number of successful extensions: 719
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 715
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1423789920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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