Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_M18
         (532 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    26   0.21 
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    22   4.5  
AB086196-1|BAD06465.1|  289|Apis mellifera Period protein.             22   4.5  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   5.9  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    21   5.9  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   7.9  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   7.9  

>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 26.2 bits (55), Expect = 0.21
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = -3

Query: 221 RRPSERNQCRSQM 183
           RRPS RN C SQM
Sbjct: 402 RRPSRRNSCESQM 414


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -2

Query: 201 SMQESDGSSNVALSASDSLVLFLSPSIRT 115
           S+ +++      +S  D LVL+ +PSI T
Sbjct: 156 SISQANEGFCAVISMHDGLVLYTTPSICT 184


>AB086196-1|BAD06465.1|  289|Apis mellifera Period protein.
          Length = 289

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -2

Query: 201 SMQESDGSSNVALSASDSLVLFLSPSIRT 115
           S+ +++      +S  D LVL+ +PSI T
Sbjct: 151 SISQANEGFCAVISMHDGLVLYTTPSICT 179


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +3

Query: 348 VHTWIHSAFALFASR 392
           +HTWIH    L  +R
Sbjct: 539 IHTWIHPWLPLLRNR 553


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 254 LDGGKRKQFLQTAAHAIMQNM 316
           L+ G+R  FL T  HA   +M
Sbjct: 189 LESGERVTFLDTPGHAAFISM 209


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +2

Query: 272 KQFLQTAAHAIMQNMTRELLML 337
           K+++ TAAH I+   T +L ++
Sbjct: 195 KRYVLTAAHCIIDENTTKLAIV 216


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -1

Query: 415 ASNFCPVFREANRANAEWIHVCTC 344
           AS +C + +E   +    I VC C
Sbjct: 83  ASKYCGIGKECELSPNSTIAVCVC 106


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,334
Number of Sequences: 438
Number of extensions: 3014
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14968302
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)