Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_M15
(645 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 32 0.081
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 29 0.76
SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subuni... 27 1.8
SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine N-methy... 27 1.8
SPCC737.02c |qcr7||ubiquinol-cytochrome-c reductase complex subu... 27 3.1
SPBPB2B2.08 |||conserved fungal protein|Schizosaccharomyces pomb... 27 3.1
SPAC1F7.05 |cdc22||ribonucleoside reductase large subunit Cdc22|... 26 4.0
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 26 4.0
SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1 |Sc... 26 5.3
SPAC25H1.06 |||histone acetyltransferase complex subunit |Schizo... 26 5.3
SPAC13G7.05 |||acyl-coA-sterol acyltransferase |Schizosaccharomy... 25 7.1
SPAC29B12.14c |||purine transporter |Schizosaccharomyces pombe|c... 25 9.3
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 25 9.3
SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces pomb... 25 9.3
SPBC19C2.13c |||conserved eukaryotic protein|Schizosaccharomyces... 25 9.3
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 31.9 bits (69), Expect = 0.081
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Frame = +1
Query: 49 TYSRYLLR---TVATEKTTSLSWKMSLTS*KIAPDLHLDRLPDYYRHVISSPA*PSECST 219
TYS+Y + T T+SLS+ +++S IAP + R Y + SS + PS S+
Sbjct: 101 TYSQYFTLQACSTCTISTSSLSYSGTISSTSIAPSMIGTRTSSSY-FITSSSSTPSSSSS 159
Query: 220 ARSILGTTPGRFILPNRTSATNC*DTHRCSRTLRSLSSPKRSAS 351
+ S ++P + +S+ + + S++ S SS +S+S
Sbjct: 160 SSS---SSPSSSSSKSSSSSKSSSSSSSSSKSSSSSSSSSKSSS 200
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 28.7 bits (61), Expect = 0.76
Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = -3
Query: 535 SGSNSLRSGLSDKQYCSSPKEESKPAP*AFS--LPSCRHIPNSTVNQKHVANFSM*SSGA 362
S S SL + +S Q SSP S P AFS +P +STV+ N S+ +S
Sbjct: 116 SWSRSLSNNISLSQSSSSPATSSFSDPKAFSAGVPKFTSDTSSTVSSTPSLNHSLQNSMP 175
Query: 361 PKEARP 344
P P
Sbjct: 176 PSTPTP 181
>SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subunit a
Pol2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 2199
Score = 27.5 bits (58), Expect = 1.8
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +1
Query: 19 TRHMLARNTITYSRYLLRTVAT 84
T ++ +N +TYS YLL+++ T
Sbjct: 1836 TSKLIVQNAVTYSNYLLKSIKT 1857
>SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine
N-methytransferase Rmt3|Schizosaccharomyces pombe|chr
2|||Manual
Length = 543
Score = 27.5 bits (58), Expect = 1.8
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -2
Query: 593 GNEIHWLVFRDGVRRDSSRFWIELSKIRFIR*TIL 489
GN+IH+L+ D VR + R ++ +K F T+L
Sbjct: 226 GNDIHFLMLNDSVRTEGYRDFVYHNKHIFAGKTVL 260
>SPCC737.02c |qcr7||ubiquinol-cytochrome-c reductase complex subunit
6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 137
Score = 26.6 bits (56), Expect = 3.1
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +1
Query: 457 ALVCSPLSGNYNIVYRINRILESSIQNLLLSR 552
AL P +Y+ VYRI R ++ SI+N +L +
Sbjct: 54 ALSRLPKMESYDRVYRIRRAMQLSIENKILPK 85
>SPBPB2B2.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 220
Score = 26.6 bits (56), Expect = 3.1
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +3
Query: 360 GAPDDYI-EKLATCFWFTVEFGMCRQEGKLKAYG 458
G PDD + LATC+W + E GK+ G
Sbjct: 154 GIPDDVFGQNLATCWWTSKESARLGGAGKIHREG 187
>SPAC1F7.05 |cdc22||ribonucleoside reductase large subunit
Cdc22|Schizosaccharomyces pombe|chr 1|||Manual
Length = 811
Score = 26.2 bits (55), Expect = 4.0
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -1
Query: 537 ILDRTL*DPVYPINNIVVPRKRRANQRHKP 448
++ R L + + +N VP RR+N RH+P
Sbjct: 471 VVTRNL-NKIIDVNYYPVPEARRSNMRHRP 499
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 26.2 bits (55), Expect = 4.0
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +1
Query: 505 INRILESSIQNLLLSRRT 558
+ R+LES+IQN+LL++ T
Sbjct: 577 VGRLLESTIQNILLAKGT 594
>SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1573
Score = 25.8 bits (54), Expect = 5.3
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Frame = +1
Query: 163 PDYYRHVISSPA*PSE---CSTARSILGTTPGRFILPNRTSA 279
PDY H+I S PSE T +++ T P LP + ++
Sbjct: 1460 PDYNIHIIDSDNIPSEELSSVTLSAVVSTIPADIELPEKVAS 1501
>SPAC25H1.06 |||histone acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 408
Score = 25.8 bits (54), Expect = 5.3
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -3
Query: 283 SWQTSGSGV*SGLEWCLIYCVLWNTRKARP 194
SW+ SG V + C YC +WN KA P
Sbjct: 339 SWRHSGRIVSA----CQEYCYVWNFNKANP 364
>SPAC13G7.05 |||acyl-coA-sterol acyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 537
Score = 25.4 bits (53), Expect = 7.1
Identities = 9/24 (37%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = -1
Query: 633 NLIIWSLSIF-EAVWQRNTLAGIP 565
++ W L ++ + WQR+TL G+P
Sbjct: 108 SMAAWVLQLYARSYWQRDTLLGLP 131
>SPAC29B12.14c |||purine transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 581
Score = 25.0 bits (52), Expect = 9.3
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -3
Query: 286 SSWQTSGSGV*SGLEWCLIYCVLW 215
++W +G+ V SGL W + +W
Sbjct: 71 NTWMIAGTAVESGLSWWEAWITVW 94
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 25.0 bits (52), Expect = 9.3
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -3
Query: 538 DSGSNSLR-SGLSDKQYCSSPKEESKPAP 455
DS S S + + S+ Q SPKEE +P P
Sbjct: 482 DSSSTSTQPTEQSNAQQAPSPKEEERPLP 510
>SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 339
Score = 25.0 bits (52), Expect = 9.3
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +3
Query: 207 RVFH--STQYIRHHSRPLYTPEPDVCHELLGHAPLFADPAFAQFSQEIGLA 353
R+ H S Y++ +Y P+ ++ H LLG + +AQ I LA
Sbjct: 178 RIVHVASIAYLQAPYSGIYFPDLNLPHVLLGTFARYGQSKYAQILYSIALA 228
>SPBC19C2.13c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 366
Score = 25.0 bits (52), Expect = 9.3
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +3
Query: 51 VFPLLIENCGYREDNIPQLEDVSNFLKDCTGFTLRPVAGLLSS 179
V L+ E G+ IP V + L +C F LRP+ +LSS
Sbjct: 205 VLELVAEGRGFA---IPWYTSVCSKLPNCDTFLLRPLREVLSS 244
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,839,622
Number of Sequences: 5004
Number of extensions: 59184
Number of successful extensions: 180
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 180
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 289756512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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