BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_M15
(645 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66497-9|CAA91286.1| 457|Caenorhabditis elegans Hypothetical pr... 341 3e-94
AF119388-1|AAD31643.1| 457|Caenorhabditis elegans phenylalanine... 336 6e-93
U80836-2|AAV58890.1| 454|Caenorhabditis elegans Abnormal catech... 245 2e-65
U21308-14|ABB88222.1| 429|Caenorhabditis elegans Tryptophan hyd... 227 4e-60
U21308-13|ABB88221.1| 532|Caenorhabditis elegans Tryptophan hyd... 227 4e-60
AF135186-1|AAD30115.1| 532|Caenorhabditis elegans tryptophan hy... 227 4e-60
U80836-1|AAV58889.1| 393|Caenorhabditis elegans Abnormal catech... 162 2e-40
AF022973-9|AAC25802.2| 1373|Caenorhabditis elegans Hypothetical ... 32 0.40
Z49936-5|CAE47467.1| 801|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z49936-4|CAE47466.1| 343|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z49936-3|CAD90174.1| 1000|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z49936-2|CAA90181.1| 586|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z49936-1|CAA90182.1| 930|Caenorhabditis elegans Hypothetical pr... 28 6.5
AY834228-1|AAV91314.1| 589|Caenorhabditis elegans Toll and inte... 28 6.5
AY834227-1|AAV91313.1| 984|Caenorhabditis elegans Toll and inte... 28 6.5
AY834226-1|AAV91312.1| 931|Caenorhabditis elegans Toll and inte... 28 6.5
>Z66497-9|CAA91286.1| 457|Caenorhabditis elegans Hypothetical
protein K08F8.4 protein.
Length = 457
Score = 341 bits (838), Expect = 3e-94
Identities = 151/198 (76%), Positives = 175/198 (88%)
Frame = +3
Query: 3 KLTHLYPTHACKEHNHVFPLLIENCGYREDNIPQLEDVSNFLKDCTGFTLRPVAGLLSSR 182
+LT +YP +AC+E N++FPLL +NCG+ D IPQL+DVS+FLKDCTG+T+RPVAGLLSSR
Sbjct: 193 ELTVMYPKNACQEFNYIFPLLQQNCGFGPDRIPQLQDVSDFLKDCTGYTIRPVAGLLSSR 252
Query: 183 DFLAGLAFRVFHSTQYIRHHSRPLYTPEPDVCHELLGHAPLFADPAFAQFSQEIGLASLG 362
DFLAGLAFRVFHSTQYIRHHS P YTPEPD+CHELLGH PLFAD FAQFSQEIGLASLG
Sbjct: 253 DFLAGLAFRVFHSTQYIRHHSAPKYTPEPDICHELLGHVPLFADVEFAQFSQEIGLASLG 312
Query: 363 APDDYIEKLATCFWFTVEFGMCRQEGKLKAYGAGLLSSFGELQYCLSDKPDLREFDPEST 542
APDD IEKLAT +WFT+EFG+C+Q+G+ KAYGAGLLSSFGELQY LSDKP++ +FDP
Sbjct: 313 APDDVIEKLATLYWFTIEFGICQQDGEKKAYGAGLLSSFGELQYALSDKPEVVDFDPAVC 372
Query: 543 AVTTYPITEYQPVYFVAK 596
VT YPITEYQP YF+A+
Sbjct: 373 CVTKYPITEYQPKYFLAE 390
>AF119388-1|AAD31643.1| 457|Caenorhabditis elegans phenylalanine
hydroxylase protein.
Length = 457
Score = 336 bits (827), Expect = 6e-93
Identities = 149/198 (75%), Positives = 173/198 (87%)
Frame = +3
Query: 3 KLTHLYPTHACKEHNHVFPLLIENCGYREDNIPQLEDVSNFLKDCTGFTLRPVAGLLSSR 182
+LT +YP +AC+E N++FPLL +NCG+ D IPQL+DVS+FLKDCTG+T+RPVAGLLS R
Sbjct: 193 ELTVMYPKNACQEFNYIFPLLQQNCGFGPDRIPQLQDVSDFLKDCTGYTIRPVAGLLSPR 252
Query: 183 DFLAGLAFRVFHSTQYIRHHSRPLYTPEPDVCHELLGHAPLFADPAFAQFSQEIGLASLG 362
DFLAG AFRVFHSTQYIRHHS P YTPEPD+CHELLGH PLFAD FAQFSQEIGLASLG
Sbjct: 253 DFLAGWAFRVFHSTQYIRHHSAPKYTPEPDICHELLGHVPLFADVEFAQFSQEIGLASLG 312
Query: 363 APDDYIEKLATCFWFTVEFGMCRQEGKLKAYGAGLLSSFGELQYCLSDKPDLREFDPEST 542
APDD IEKLAT +WFT+EFG+C+Q+G+ KAYGAGLLSSFGELQY LSDKP++ +FDP
Sbjct: 313 APDDVIEKLATLYWFTIEFGICQQDGEKKAYGAGLLSSFGELQYALSDKPEVVDFDPAVC 372
Query: 543 AVTTYPITEYQPVYFVAK 596
VT YPITEYQP YF+A+
Sbjct: 373 CVTKYPITEYQPKYFLAE 390
>U80836-2|AAV58890.1| 454|Caenorhabditis elegans Abnormal
catecholamine distributionprotein 2, isoform b protein.
Length = 454
Score = 245 bits (600), Expect = 2e-65
Identities = 111/200 (55%), Positives = 145/200 (72%)
Frame = +3
Query: 3 KLTHLYPTHACKEHNHVFPLLIENCGYREDNIPQLEDVSNFLKDCTGFTLRPVAGLLSSR 182
KL L+ +H C + +L E D IPQ+ DV+ FL+ TGF LRP +GLLS+R
Sbjct: 190 KLGDLHLSHTCAVYRQNLKILQEEKVLTADRIPQIRDVNKFLQKKTGFELRPCSGLLSAR 249
Query: 183 DFLAGLAFRVFHSTQYIRHHSRPLYTPEPDVCHELLGHAPLFADPAFAQFSQEIGLASLG 362
DFLA LAFRVF +T Y+RHH P ++PEPD+ HELLGH P+F+DP AQ SQ+IGL SLG
Sbjct: 250 DFLASLAFRVFQTTTYLRHHKSPHHSPEPDLIHELLGHVPMFSDPLLAQMSQDIGLMSLG 309
Query: 363 APDDYIEKLATCFWFTVEFGMCRQEGKLKAYGAGLLSSFGELQYCLSDKPDLREFDPEST 542
A D++IEKL+T +WF VEFG+C+++GKLKA GAGLLS++GEL + SD P+ ++FDP T
Sbjct: 310 ASDEHIEKLSTVYWFIVEFGLCKEDGKLKAIGAGLLSAYGELMHACSDAPEHKDFDPAVT 369
Query: 543 AVTTYPITEYQPVYFVAKQL 602
AV Y +YQP+YFVA +
Sbjct: 370 AVQKYEDDDYQPLYFVADSI 389
>U21308-14|ABB88222.1| 429|Caenorhabditis elegans Tryptophan
hydroxylase protein1, isoform b protein.
Length = 429
Score = 227 bits (556), Expect = 4e-60
Identities = 112/211 (53%), Positives = 140/211 (66%), Gaps = 13/211 (6%)
Frame = +3
Query: 3 KLTHLYPTHACKEHNHVFPLLIENCGYREDNIPQLEDVSNFLKDCTGFTLRPVAGLLSSR 182
KL L+ HACK+ F LL +CGY E+NIPQLED+ FLK TGF +RPVAG LS+R
Sbjct: 157 KLRELHKKHACKQFLDNFELLERHCGYSENNIPQLEDICKFLKAKTGFRVRPVAGYLSAR 216
Query: 183 DFLAGLAFRVFHSTQYIRHHSRPLYTPEPDVCHELLGHAPLFADPAFAQFSQEIGLASLG 362
DFLAGLA+RVF TQY+RHH+ P YTPEPD HEL+GH LFADP FAQFSQEIGLASLG
Sbjct: 217 DFLAGLAYRVFFCTQYVRHHADPFYTPEPDTVHELMGHMALFADPDFAQFSQEIGLASLG 276
Query: 363 APDDYIEKLATCFWFTVEFGMCRQEG-------------KLKAYGAGLLSSFGELQYCLS 503
A ++ ++KLAT ++F++EFG+ + + K YGAGLLSS GELQ+ +
Sbjct: 277 ASEEDLKKLATLYFFSIEFGLSSDDAADSPVKENGSNHERFKVYGAGLLSSAGELQHAVE 336
Query: 504 DKPDLREFDPESTAVTTYPITEYQPVYFVAK 596
+ FDP+ IT +Q YF +
Sbjct: 337 GSATIIRFDPDRVVEQECLITTFQSAYFYTR 367
>U21308-13|ABB88221.1| 532|Caenorhabditis elegans Tryptophan
hydroxylase protein1, isoform a protein.
Length = 532
Score = 227 bits (556), Expect = 4e-60
Identities = 112/211 (53%), Positives = 140/211 (66%), Gaps = 13/211 (6%)
Frame = +3
Query: 3 KLTHLYPTHACKEHNHVFPLLIENCGYREDNIPQLEDVSNFLKDCTGFTLRPVAGLLSSR 182
KL L+ HACK+ F LL +CGY E+NIPQLED+ FLK TGF +RPVAG LS+R
Sbjct: 260 KLRELHKKHACKQFLDNFELLERHCGYSENNIPQLEDICKFLKAKTGFRVRPVAGYLSAR 319
Query: 183 DFLAGLAFRVFHSTQYIRHHSRPLYTPEPDVCHELLGHAPLFADPAFAQFSQEIGLASLG 362
DFLAGLA+RVF TQY+RHH+ P YTPEPD HEL+GH LFADP FAQFSQEIGLASLG
Sbjct: 320 DFLAGLAYRVFFCTQYVRHHADPFYTPEPDTVHELMGHMALFADPDFAQFSQEIGLASLG 379
Query: 363 APDDYIEKLATCFWFTVEFGMCRQEG-------------KLKAYGAGLLSSFGELQYCLS 503
A ++ ++KLAT ++F++EFG+ + + K YGAGLLSS GELQ+ +
Sbjct: 380 ASEEDLKKLATLYFFSIEFGLSSDDAADSPVKENGSNHERFKVYGAGLLSSAGELQHAVE 439
Query: 504 DKPDLREFDPESTAVTTYPITEYQPVYFVAK 596
+ FDP+ IT +Q YF +
Sbjct: 440 GSATIIRFDPDRVVEQECLITTFQSAYFYTR 470
>AF135186-1|AAD30115.1| 532|Caenorhabditis elegans tryptophan
hydroxylase protein.
Length = 532
Score = 227 bits (556), Expect = 4e-60
Identities = 112/211 (53%), Positives = 140/211 (66%), Gaps = 13/211 (6%)
Frame = +3
Query: 3 KLTHLYPTHACKEHNHVFPLLIENCGYREDNIPQLEDVSNFLKDCTGFTLRPVAGLLSSR 182
KL L+ HACK+ F LL +CGY E+NIPQLED+ FLK TGF +RPVAG LS+R
Sbjct: 260 KLRELHKKHACKQFLDNFELLERHCGYSENNIPQLEDICKFLKAKTGFRVRPVAGYLSAR 319
Query: 183 DFLAGLAFRVFHSTQYIRHHSRPLYTPEPDVCHELLGHAPLFADPAFAQFSQEIGLASLG 362
DFLAGLA+RVF TQY+RHH+ P YTPEPD HEL+GH LFADP FAQFSQEIGLASLG
Sbjct: 320 DFLAGLAYRVFFCTQYVRHHADPFYTPEPDTVHELMGHMALFADPDFAQFSQEIGLASLG 379
Query: 363 APDDYIEKLATCFWFTVEFGMCRQEG-------------KLKAYGAGLLSSFGELQYCLS 503
A ++ ++KLAT ++F++EFG+ + + K YGAGLLSS GELQ+ +
Sbjct: 380 ASEEDLKKLATLYFFSIEFGLSSDDAADSPVKENGSNHERFKVYGAGLLSSAGELQHAVE 439
Query: 504 DKPDLREFDPESTAVTTYPITEYQPVYFVAK 596
+ FDP+ IT +Q YF +
Sbjct: 440 GSATIIRFDPDRVVEQECLITTFQSAYFYTR 470
>U80836-1|AAV58889.1| 393|Caenorhabditis elegans Abnormal
catecholamine distributionprotein 2, isoform a protein.
Length = 393
Score = 162 bits (394), Expect = 2e-40
Identities = 74/134 (55%), Positives = 95/134 (70%)
Frame = +3
Query: 3 KLTHLYPTHACKEHNHVFPLLIENCGYREDNIPQLEDVSNFLKDCTGFTLRPVAGLLSSR 182
KL L+ +H C + +L E D IPQ+ DV+ FL+ TGF LRP +GLLS+R
Sbjct: 260 KLGDLHLSHTCAVYRQNLKILQEEKVLTADRIPQIRDVNKFLQKKTGFELRPCSGLLSAR 319
Query: 183 DFLAGLAFRVFHSTQYIRHHSRPLYTPEPDVCHELLGHAPLFADPAFAQFSQEIGLASLG 362
DFLA LAFRVF +T Y+RHH P ++PEPD+ HELLGH P+F+DP AQ SQ+IGL SLG
Sbjct: 320 DFLASLAFRVFQTTTYLRHHKSPHHSPEPDLIHELLGHVPMFSDPLLAQMSQDIGLMSLG 379
Query: 363 APDDYIEKLATCFW 404
A D++IEKL+T +W
Sbjct: 380 ASDEHIEKLSTVYW 393
>AF022973-9|AAC25802.2| 1373|Caenorhabditis elegans Hypothetical
protein F25G6.9 protein.
Length = 1373
Score = 31.9 bits (69), Expect = 0.40
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +3
Query: 60 LLIENCGYREDNIPQLEDVSNFLKDCTG 143
LL E C EDN L +SN LK+CTG
Sbjct: 461 LLKECCKVTEDNEKALSKISNSLKECTG 488
>Z49936-5|CAE47467.1| 801|Caenorhabditis elegans Hypothetical
protein F13B10.1e protein.
Length = 801
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 505 INRILESSIQNLLLSRRTPSRNTSQCISLPNSFEDAKGPDD 627
+NR L SS+ + ++ N + L +FE AK PDD
Sbjct: 529 VNRSLLSSLTDEMMQNACGITNPIHRLKLTQAFETAKHPDD 569
>Z49936-4|CAE47466.1| 343|Caenorhabditis elegans Hypothetical
protein F13B10.1d protein.
Length = 343
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 505 INRILESSIQNLLLSRRTPSRNTSQCISLPNSFEDAKGPDD 627
+NR L SS+ + ++ N + L +FE AK PDD
Sbjct: 74 VNRSLLSSLTDEMMQNACGITNPIHRLKLTQAFETAKHPDD 114
>Z49936-3|CAD90174.1| 1000|Caenorhabditis elegans Hypothetical
protein F13B10.1c protein.
Length = 1000
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 505 INRILESSIQNLLLSRRTPSRNTSQCISLPNSFEDAKGPDD 627
+NR L SS+ + ++ N + L +FE AK PDD
Sbjct: 712 VNRSLLSSLTDEMMQNACGITNPIHRLKLTQAFETAKHPDD 752
>Z49936-2|CAA90181.1| 586|Caenorhabditis elegans Hypothetical
protein F13B10.1b protein.
Length = 586
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 505 INRILESSIQNLLLSRRTPSRNTSQCISLPNSFEDAKGPDD 627
+NR L SS+ + ++ N + L +FE AK PDD
Sbjct: 317 VNRSLLSSLTDEMMQNACGITNPIHRLKLTQAFETAKHPDD 357
>Z49936-1|CAA90182.1| 930|Caenorhabditis elegans Hypothetical
protein F13B10.1a protein.
Length = 930
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 505 INRILESSIQNLLLSRRTPSRNTSQCISLPNSFEDAKGPDD 627
+NR L SS+ + ++ N + L +FE AK PDD
Sbjct: 658 VNRSLLSSLTDEMMQNACGITNPIHRLKLTQAFETAKHPDD 698
>AY834228-1|AAV91314.1| 589|Caenorhabditis elegans Toll and
interleukin 1 receptordomain protein isoform f protein.
Length = 589
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 505 INRILESSIQNLLLSRRTPSRNTSQCISLPNSFEDAKGPDD 627
+NR L SS+ + ++ N + L +FE AK PDD
Sbjct: 317 VNRSLLSSLTDEMMQNACGITNPIHRLKLTQAFETAKHPDD 357
>AY834227-1|AAV91313.1| 984|Caenorhabditis elegans Toll and
interleukin 1 receptordomain protein isoform c protein.
Length = 984
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 505 INRILESSIQNLLLSRRTPSRNTSQCISLPNSFEDAKGPDD 627
+NR L SS+ + ++ N + L +FE AK PDD
Sbjct: 712 VNRSLLSSLTDEMMQNACGITNPIHRLKLTQAFETAKHPDD 752
>AY834226-1|AAV91312.1| 931|Caenorhabditis elegans Toll and
interleukin 1 receptordomain protein isoform a protein.
Length = 931
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 505 INRILESSIQNLLLSRRTPSRNTSQCISLPNSFEDAKGPDD 627
+NR L SS+ + ++ N + L +FE AK PDD
Sbjct: 659 VNRSLLSSLTDEMMQNACGITNPIHRLKLTQAFETAKHPDD 699
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,844,277
Number of Sequences: 27780
Number of extensions: 336357
Number of successful extensions: 990
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 987
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -