Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_M12
(623 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC2F3.09 |hem1||5-aminolevulinate synthase|Schizosaccharomyces... 101 1e-22
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 34 0.019
SPCC1739.14 |npp106||nucleoporin Npp106|Schizosaccharomyces pomb... 29 0.72
SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C |Schizosacchar... 29 0.72
SPCC1442.08c |cox12||cytochrome c oxidase subunit VIb|Schizosacc... 28 0.95
SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit Srb9... 27 1.7
SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces p... 26 3.8
SPAC1002.05c |jmj2||histone demethylase Jmj2 |Schizosaccharomyce... 26 3.8
SPAC1687.19c |||queuine tRNA-ribosyltransferase|Schizosaccharomy... 26 5.1
SPAC23H3.15c ||SPAC25H1.01c|sequence orphan|Schizosaccharomyces ... 26 5.1
SPAC25B8.05 |||pseudouridylate synthase |Schizosaccharomyces pom... 25 6.7
SPBC15D4.06 |||NatC N-acetyltransferase complex catalytic subuni... 25 6.7
SPAC23H3.02c |ini1||RING finger-like protein Ini1|Schizosaccharo... 25 6.7
SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr... 25 8.9
SPCC1235.04c |||FAD synthetase|Schizosaccharomyces pombe|chr 3||... 25 8.9
SPAC3A12.05c |taf2||TATA-binding protein associated factor Taf2|... 25 8.9
SPAC1805.03c |trm13||tRNA 2'-O-methyltransferase Trm13 |Schizosa... 25 8.9
>SPAC2F3.09 |hem1||5-aminolevulinate synthase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 558
Score = 101 bits (241), Expect = 1e-22
Identities = 46/107 (42%), Positives = 66/107 (61%)
Frame = +3
Query: 303 STKPYQYENFFHEQISAKKKDYSYRVFRKVSRLAADGAYPSALEGAENRRVTVWCANDYL 482
+T + Y+ F+ E++ K +D SYR F ++RLA + YP A N RV VWC+NDYL
Sbjct: 128 TTPRFDYDTFYREELDKKHRDKSYRYFNNINRLAKE--YPLAHLADPNTRVEVWCSNDYL 185
Query: 483 GTSRHPSVQDAAISAIRSYGTGAGGTRNIAGNSQMTEKLEAEISKLH 623
H +++A I +YG GAGGTRNIAG++Q +LE ++ LH
Sbjct: 186 NMGGHKKIREAMHQCIETYGGGAGGTRNIAGHNQHAVRLEKSLADLH 232
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 33.9 bits (74), Expect = 0.019
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = -1
Query: 575 TSNVSGTTSPSAIGSNSTYGSILYRRMTGCTQIIVGTPYSHSAV--FSTFKSAGICTVSG 402
TS+ S +S S+I ST+ S + +G TP S+S V STF S+G T SG
Sbjct: 664 TSSASTPSSNSSIVPTSTFTSSGFNTTSGLPTSSASTPLSNSTVAPTSTFTSSGFNTTSG 723
Score = 33.5 bits (73), Expect = 0.025
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = -1
Query: 575 TSNVSGTTSPSAIGSNSTYGSILYRRMTGCTQIIVGTPYSHSAVF--STFKSAGICTVSG 402
TS+ S S S + ST+ S + +G TP S+S++ STF S+G T SG
Sbjct: 633 TSSASTPLSNSTVAPTSTFTSSGFNTTSGLPTSSASTPSSNSSIVPTSTFTSSGFNTTSG 692
Score = 32.7 bits (71), Expect = 0.044
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = -1
Query: 578 VTSNVSGTTSPSAIGSNSTYGSILYRRMTGCTQIIVGTPYSHSAV--FSTFKSAGICTVS 405
VT+ S S S + ST+ S + +G TP S+S V STF S+G T S
Sbjct: 601 VTTPTSTPLSNSTVAPTSTFTSSGFNTTSGLPTSSASTPLSNSTVAPTSTFTSSGFNTTS 660
Query: 404 G 402
G
Sbjct: 661 G 661
Score = 27.5 bits (58), Expect = 1.7
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = -1
Query: 575 TSNVSGTTSPSAIGSNSTYGSILYRRMTGCTQIIVGTPYSHSAVFSTFKSAGICTVS 405
TS+ S S S + ST+ S + +G V TP S+S S + S+G T S
Sbjct: 695 TSSASTPLSNSTVAPTSTFTSSGFNTTSGLPTSSVSTPLSNS---SAYPSSGSSTFS 748
>SPCC1739.14 |npp106||nucleoporin Npp106|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 933
Score = 28.7 bits (61), Expect = 0.72
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +3
Query: 189 IITRGFLSLGNDETKCPFIQQNAIISEAPAEMTEDIV 299
I++RG S+ + E+K I N + SEAP + +++
Sbjct: 736 IVSRGLWSIDSKESKNMHISSNVVASEAPDALAANLL 772
>SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 988
Score = 28.7 bits (61), Expect = 0.72
Identities = 12/25 (48%), Positives = 12/25 (48%), Gaps = 3/25 (12%)
Frame = +2
Query: 458 CMVCQRLFGYIPSSFCTRC---CHK 523
C VC LF Y P C C CHK
Sbjct: 427 CAVCAELFSYSPGLQCENCSFVCHK 451
>SPCC1442.08c |cox12||cytochrome c oxidase subunit
VIb|Schizosaccharomyces pombe|chr 3|||Manual
Length = 83
Score = 28.3 bits (60), Expect = 0.95
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3
Query: 471 WHTIQSLCGFQHLQERWDMHRQ 406
WH QSLC + + ERWD R+
Sbjct: 55 WHAYQSLCPMEWV-ERWDEQRE 75
>SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit
Srb9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1223
Score = 27.5 bits (58), Expect = 1.7
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +3
Query: 168 QYGKYCPIITRGFLSLGNDETKCPFIQQNAIIS 266
++ K I+ RG+L+L DE+ P + + +IS
Sbjct: 1131 EFKKISTILARGYLALDEDESYLPLLSIHLLIS 1163
>SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1323
Score = 26.2 bits (55), Expect = 3.8
Identities = 7/22 (31%), Positives = 13/22 (59%)
Frame = +2
Query: 452 SDCMVCQRLFGYIPSSFCTRCC 517
S+ +C++ + +P CT CC
Sbjct: 1248 SNTRICEKCYSLVPRMSCTFCC 1269
>SPAC1002.05c |jmj2||histone demethylase Jmj2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 715
Score = 26.2 bits (55), Expect = 3.8
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 195 TRGFLSLGNDETKCPFIQQNAIISEAPAEMTEDIVE 302
T + +L N E C ++N +E+TEDIVE
Sbjct: 346 TGNYYTLSNFEKYCDNFKKNYFSKFKDSEITEDIVE 381
>SPAC1687.19c |||queuine tRNA-ribosyltransferase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 404
Score = 25.8 bits (54), Expect = 5.1
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +3
Query: 279 EMTEDIVESTKPYQYENFFHEQISAKKKDY 368
+M E I++ P +NFFHE K +Y
Sbjct: 358 DMRESIIKDEFPSFVKNFFHEWNHGDKSNY 387
>SPAC23H3.15c ||SPAC25H1.01c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 325
Score = 25.8 bits (54), Expect = 5.1
Identities = 20/58 (34%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Frame = -1
Query: 575 TSNVSGTTSPSAIGSNSTYGSILYRRMTGCTQ-IIVGTPYSHSAVFSTFKSAGICTVS 405
TS S TT PS ++YG Y + TQ G YS S T+ S T S
Sbjct: 135 TSGGSYTTDPSRTDDTASYGQSQYNQSRKTTQGGDYGEDYSQSYPTDTYGSRQKATPS 192
>SPAC25B8.05 |||pseudouridylate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 450
Score = 25.4 bits (53), Expect = 6.7
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 120 SLNQSFVRNYGSSLLKQYGKYCPIITR 200
S S N G LLK+ KY PI++R
Sbjct: 394 SEESSSTMNVGEGLLKRTKKYIPILSR 420
>SPBC15D4.06 |||NatC N-acetyltransferase complex catalytic subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 150
Score = 25.4 bits (53), Expect = 6.7
Identities = 13/55 (23%), Positives = 23/55 (41%)
Frame = -1
Query: 539 IGSNSTYGSILYRRMTGCTQIIVGTPYSHSAVFSTFKSAGICTVSG*TRYFPENT 375
I + T S+ + G +I++ T + A S ++ G C RY+ T
Sbjct: 86 IATKLTQASLDVMKNRGAQEIVLETEVDNEAAMSFYERLGFCRYKRLYRYYLNGT 140
>SPAC23H3.02c |ini1||RING finger-like protein
Ini1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 117
Score = 25.4 bits (53), Expect = 6.7
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +2
Query: 443 KPQSDCMVCQRLFGYIPSSFCTRCCHKC 526
K D ++C+R G C RC KC
Sbjct: 3 KHHPDLVLCRRQPGITVGKLCERCDEKC 30
>SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1275
Score = 25.0 bits (52), Expect = 8.9
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -3
Query: 429 ERWDMHRQRLNEILS*KHGKSNPSSSR*SARGKNFHIDMV 310
E W+ ++LN+I+ K PS+S A GK MV
Sbjct: 1211 EIWNTRTRKLNQIIQGNDIKYYPSNSDWLANGKYIMFGMV 1250
>SPCC1235.04c |||FAD synthetase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 265
Score = 25.0 bits (52), Expect = 8.9
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +3
Query: 159 LLKQYGKYCPIITRGFLSLGNDETKCP 239
LL+ KYC + RG+ SLG P
Sbjct: 184 LLETNTKYCSLYDRGYTSLGGVSDTSP 210
>SPAC3A12.05c |taf2||TATA-binding protein associated factor
Taf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1174
Score = 25.0 bits (52), Expect = 8.9
Identities = 21/73 (28%), Positives = 31/73 (42%)
Frame = +3
Query: 93 IKMPCPFLGSLNQSFVRNYGSSLLKQYGKYCPIITRGFLSLGNDETKCPFIQQNAIISEA 272
++ C FL FVR YGS + K C + F + T I N+I+
Sbjct: 317 VENTCVFLYKAMDFFVREYGSYPFNSF-KLCFVDETNFPII---STPSLVISSNSIL--Y 370
Query: 273 PAEMTEDIVESTK 311
P + + I +STK
Sbjct: 371 PKDSLDQIYDSTK 383
>SPAC1805.03c |trm13||tRNA 2'-O-methyltransferase Trm13
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 407
Score = 25.0 bits (52), Expect = 8.9
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = -3
Query: 306 LTLRCLPSFPPEPLI*SRSAE*RGT*FHHCRVR 208
LTL CL S PP L+ + HHCR R
Sbjct: 274 LTLNCLKSSPPNALVIALCCH------HHCRWR 300
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,616,589
Number of Sequences: 5004
Number of extensions: 55244
Number of successful extensions: 208
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 207
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 275671126
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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