Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_M03
         (442 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY035864-1|AAK62026.1| 1709|Homo sapiens GW182 autoantigen protein.    29   5.4  
AK124284-1|BAC85826.1|  124|Homo sapiens protein ( Homo sapiens ...    29   5.4  
AJ492221-1|CAD37348.1| 1962|Homo sapiens EDIE protein protein.         29   5.4  
AB040893-1|BAA95984.1| 1400|Homo sapiens KIAA1460 protein protein.     29   5.4  
AL451085-5|CAI13241.1|  315|Homo sapiens pre-B-cell leukemia hom...    29   7.1  
AK001040-1|BAA91477.1|  567|Homo sapiens protein ( Homo sapiens ...    29   9.4  
AB076978-1|BAD06454.1|  574|Homo sapiens Grb2-associated binder ...    29   9.4  

>AY035864-1|AAK62026.1| 1709|Homo sapiens GW182 autoantigen protein.
          Length = 1709

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 12/37 (32%), Positives = 24/37 (64%)
 Frame = +1

Query: 166 DPFNLLSTINRDSSADSEPLYPGPASGDPLLAQSSST 276
           +P    +T++  +SA  +P+  GP+ G+P+ A SS++
Sbjct: 813 EPSTPATTVDNGTSAWGKPIDSGPSWGEPIAAASSTS 849


>AK124284-1|BAC85826.1|  124|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42290 fis, clone TLIVE2007132. ).
          Length = 124

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 17/43 (39%), Positives = 23/43 (53%)
 Frame = +1

Query: 160 TTDPFNLLSTINRDSSADSEPLYPGPASGDPLLAQSSSTKPIR 288
           TTDP  +LS    + S +  PL   PAS   + AQ S TK ++
Sbjct: 26  TTDPHQVLSRSGPNGSLEFGPLVSSPASPFLVQAQISLTKIVQ 68


>AJ492221-1|CAD37348.1| 1962|Homo sapiens EDIE protein protein.
          Length = 1962

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 12/37 (32%), Positives = 24/37 (64%)
 Frame = +1

Query: 166  DPFNLLSTINRDSSADSEPLYPGPASGDPLLAQSSST 276
            +P    +T++  +SA  +P+  GP+ G+P+ A SS++
Sbjct: 1066 EPSTPATTVDNGTSAWGKPIDSGPSWGEPIAAASSTS 1102


>AB040893-1|BAA95984.1| 1400|Homo sapiens KIAA1460 protein protein.
          Length = 1400

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 12/37 (32%), Positives = 24/37 (64%)
 Frame = +1

Query: 166 DPFNLLSTINRDSSADSEPLYPGPASGDPLLAQSSST 276
           +P    +T++  +SA  +P+  GP+ G+P+ A SS++
Sbjct: 504 EPSTPATTVDNGTSAWGKPIDSGPSWGEPIAAASSTS 540


>AL451085-5|CAI13241.1|  315|Homo sapiens pre-B-cell leukemia
           homeobox interacting protein 1 protein.
          Length = 315

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
 Frame = +2

Query: 239 RRAIPFLPNHPAPSL--YERYLSPVLGSNCL 325
           +R + +LP HP P L  Y + + PVLGS+ L
Sbjct: 284 KRNVSYLPTHPDPPLSHYSQGVFPVLGSHPL 314


>AK001040-1|BAA91477.1|  567|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10178 fis, clone HEMBA1004146. ).
          Length = 567

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 15/52 (28%), Positives = 26/52 (50%)
 Frame = +2

Query: 254 FLPNHPAPSLYERYLSPVLGSNCLIMISDIYTRRIYYWTYSIFRILNFIHCF 409
           + P  P P  + +Y S + G+N +   S  Y   +Y W   +F+++ FI  F
Sbjct: 506 YYPYPPVPETFSKYSSSIKGTNVIASPSK-YVYILYVW-LMLFQLVIFILFF 555


>AB076978-1|BAD06454.1|  574|Homo sapiens Grb2-associated binder
           2-like protein protein.
          Length = 574

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = +1

Query: 169 PFNLLSTINRDSSADSEP-LYPGPASGDPLLAQSSSTKPIRA 291
           P +  S  N DS    E  L+P PAS  P+   +SS+ P R+
Sbjct: 471 PISTQSITNTDSEDSGERYLFPNPASAFPVSGGTSSSAPPRS 512


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,072,667
Number of Sequences: 237096
Number of extensions: 1234646
Number of successful extensions: 3018
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2949
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3018
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3602345922
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)