Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_M03
         (442 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z36719-4|CAA85315.2|  513|Caenorhabditis elegans Hypothetical pr...    32   0.16 
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr...    28   3.5  
AL032652-7|CAA21711.1|  277|Caenorhabditis elegans Hypothetical ...    28   3.5  
AL031627-18|CAA20951.1|  347|Caenorhabditis elegans Hypothetical...    27   4.6  
AC024801-12|AAF59643.4|  569|Caenorhabditis elegans Hypothetical...    27   4.6  

>Z36719-4|CAA85315.2|  513|Caenorhabditis elegans Hypothetical
           protein C06C3.8 protein.
          Length = 513

 Score = 32.3 bits (70), Expect = 0.16
 Identities = 21/72 (29%), Positives = 37/72 (51%)
 Frame = -3

Query: 236 GPGYKGSESALESRLIVLSRLKGSVVRHNYVVTITVSMGLLLLCYARSNRLYVDSP*AIT 57
           G  Y G   AL   L+++S +K + +R +YV T  VS+   +L     N   V    AI 
Sbjct: 40  GRTYNGVSMALPFVLLIISAIKKNSLRKDYVATGDVSLAGAVLTVDYINNKIVG---AIN 96

Query: 56  VGMKVILVSSDS 21
            G+K +++ +++
Sbjct: 97  AGLKGVVIPAEN 108


>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
           protein F35A5.1 protein.
          Length = 1274

 Score = 27.9 bits (59), Expect = 3.5
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +1

Query: 199 DSSADSEPLYPGPASGDPLLAQSSSTKP 282
           DS A ++P+  GP+S DP LA+ +  KP
Sbjct: 708 DSEAAADPV-SGPSSKDPKLAKKAPVKP 734


>AL032652-7|CAA21711.1|  277|Caenorhabditis elegans Hypothetical
           protein Y63D3A.9 protein.
          Length = 277

 Score = 27.9 bits (59), Expect = 3.5
 Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
 Frame = +2

Query: 206 AQILNPYTL-DRRRAIPFLPNHPAPSLYERYLSPVLGSNCLIMISDIYTRRIYYWTYSIF 382
           A I  P+TL D    +        P L E Y+   L  + L+       + I YW Y IF
Sbjct: 181 AVIYRPFTLSDLNLFLQHWRKGSNPRLEEIYIG--LKEDNLVDFKKTLLKGIEYWKYGIF 238

Query: 383 RILN 394
           R+ N
Sbjct: 239 RVYN 242


>AL031627-18|CAA20951.1|  347|Caenorhabditis elegans Hypothetical
           protein Y102A5C.29 protein.
          Length = 347

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1

Query: 145 WSRSPSVWDYYYCATHVRIV 86
           W  SP +  Y YC T+V+IV
Sbjct: 36  WFESPGMHGYRYCLTYVQIV 55


>AC024801-12|AAF59643.4|  569|Caenorhabditis elegans Hypothetical
           protein Y50D7A.8 protein.
          Length = 569

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +1

Query: 160 TTDPFNLLSTINRDSSADSEP 222
           T DP+N LSTIN  SS+   P
Sbjct: 421 TDDPYNNLSTINEPSSSSLPP 441


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,510,068
Number of Sequences: 27780
Number of extensions: 189685
Number of successful extensions: 509
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 509
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 756625558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)