Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_L24
         (625 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK127397-1|BAC86958.1|  130|Homo sapiens protein ( Homo sapiens ...    33   0.82 
AK057427-1|BAB71481.1|  123|Homo sapiens protein ( Homo sapiens ...    31   2.5  
U78525-1|AAC99479.1|  814|Homo sapiens eukaryotic translation in...    31   4.4  
U62583-1|AAB42010.1|  873|Homo sapiens Prt1 homolog protein.           31   4.4  
BC110865-1|AAI10866.1|  814|Homo sapiens eukaryotic translation ...    31   4.4  
BC009986-1|AAH09986.1|  622|Homo sapiens Unknown (protein for IM...    31   4.4  
BC001173-1|AAH01173.1|  814|Homo sapiens EIF3S9 protein protein.       31   4.4  
AK129921-1|BAC85250.1|  219|Homo sapiens or (EC 1.10.2.2).  prot...    30   5.8  

>AK127397-1|BAC86958.1|  130|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45488 fis, clone BRTHA2003759. ).
          Length = 130

 Score = 33.1 bits (72), Expect = 0.82
 Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
 Frame = -3

Query: 233 YIRSIMFSVIFGFMN---YCSIGGHVYRNYIKLICYKRKIAF*FIEVYLYICIFVVVYFY 63
           Y+   MF  IF F+    Y  I  +VY  Y+ +  Y     + +I +Y+YIC+++ +Y Y
Sbjct: 6   YVYIYMFMYIFIFIYIFIYIYIYVYVYI-YLYIYFYIFTYIYLYIFIYIYICLYIYLYIY 64


>AK057427-1|BAB71481.1|  123|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32865 fis, clone TESTI2003649, weakly similar to
           GLYCOPROTEIN X PRECURSOR. ).
          Length = 123

 Score = 31.5 bits (68), Expect = 2.5
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = -1

Query: 601 RGSGRRKSGTIRNPADSNSGITSIRTVWTPILRTR 497
           RG+GRR+  T  +PA + S +T+ RT WT    +R
Sbjct: 9   RGNGRRRPSTRASPARTRS-VTATRTSWTTTAASR 42


>U78525-1|AAC99479.1|  814|Homo sapiens eukaryotic translation
           initiation factor protein.
          Length = 814

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 16/30 (53%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
 Frame = -3

Query: 596 KRKAQE-WNDQKPRRLELRDYVDTDGLDTD 510
           ++ AQE + +QK  RLELR  VDTD LD++
Sbjct: 761 RKMAQELYMEQKNERLELRGGVDTDELDSN 790


>U62583-1|AAB42010.1|  873|Homo sapiens Prt1 homolog protein.
          Length = 873

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 16/30 (53%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
 Frame = -3

Query: 596 KRKAQE-WNDQKPRRLELRDYVDTDGLDTD 510
           ++ AQE + +QK  RLELR  VDTD LD++
Sbjct: 761 RKMAQELYMEQKNERLELRGGVDTDELDSN 790


>BC110865-1|AAI10866.1|  814|Homo sapiens eukaryotic translation
           initiation factor 3, subunit B protein.
          Length = 814

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 16/30 (53%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
 Frame = -3

Query: 596 KRKAQE-WNDQKPRRLELRDYVDTDGLDTD 510
           ++ AQE + +QK  RLELR  VDTD LD++
Sbjct: 761 RKMAQELYMEQKNERLELRGGVDTDELDSN 790


>BC009986-1|AAH09986.1|  622|Homo sapiens Unknown (protein for
           IMAGE:4124553) protein.
          Length = 622

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 16/30 (53%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
 Frame = -3

Query: 596 KRKAQE-WNDQKPRRLELRDYVDTDGLDTD 510
           ++ AQE + +QK  RLELR  VDTD LD++
Sbjct: 569 RKMAQELYMEQKNERLELRGGVDTDELDSN 598


>BC001173-1|AAH01173.1|  814|Homo sapiens EIF3S9 protein protein.
          Length = 814

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 16/30 (53%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
 Frame = -3

Query: 596 KRKAQE-WNDQKPRRLELRDYVDTDGLDTD 510
           ++ AQE + +QK  RLELR  VDTD LD++
Sbjct: 761 RKMAQELYMEQKNERLELRGGVDTDELDSN 790


>AK129921-1|BAC85250.1|  219|Homo sapiens or (EC 1.10.2.2).
           protein.
          Length = 219

 Score = 30.3 bits (65), Expect = 5.8
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -1

Query: 115 NLLKCIYIYVYLL*FIFIHKAWFEIKCF 32
           N+  C+Y+Y Y    I IHK+W+++  F
Sbjct: 176 NVSICVYVYTYA---IHIHKSWYKVAIF 200


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,276,536
Number of Sequences: 237096
Number of extensions: 1561193
Number of successful extensions: 7254
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7213
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6747805200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)