Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_L16
         (552 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   2.7  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    21   6.3  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   8.3  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    21   8.3  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +1

Query: 58  IILILLVSLGLCHADDIAQAAGQ 126
           IIL+ LV+LG+C  +   +AA Q
Sbjct: 5   IILLALVALGVCAPNVKQRAADQ 27


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +1

Query: 154 ISNSVTGQQGNTAQNTLQQIGTVVGGV 234
           ISNS T       ++T++  GTV G V
Sbjct: 174 ISNSYTNGCVEALKDTVKLAGTVFGSV 200


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
 Frame = -3

Query: 220 PYRFVAMYSEPYSLAVQSQN*ILNLEGYC*IFDQPLELCHRHDIA-LEKPVILKLFSFW 47
           P  F+A+      L +QS +   N+EGY  +  +  ++  R  I  +   V++  F  W
Sbjct: 217 PMVFIAVLYIRIGLRIQSDSLAENVEGY--VHGETKQVQSRKTITRMLSAVVITFFICW 273


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 295 TDDDLLRISEEMFNADINNA 354
           T +DLL    +M+   +NNA
Sbjct: 455 TIEDLLHFCRQMYAMKVNNA 474


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,160
Number of Sequences: 438
Number of extensions: 2762
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15827139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)