Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_L14
(647 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132860-13|CAB60509.1| 292|Caenorhabditis elegans Hypothetical... 33 0.17
Z49909-4|CAA90108.1| 876|Caenorhabditis elegans Hypothetical pr... 31 0.93
AY303577-1|AAP57299.1| 876|Caenorhabditis elegans cell death-re... 31 0.93
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 30 1.2
U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily ass... 29 2.8
AF025463-7|AAB71007.1| 1210|Caenorhabditis elegans Hypothetical ... 29 3.8
AL132846-3|CAB60346.2| 1648|Caenorhabditis elegans Hypothetical ... 28 5.0
AC087081-18|AAK66030.1| 124|Caenorhabditis elegans Hypothetical... 28 6.6
U53146-1|AAA96111.1| 348|Caenorhabditis elegans Hypothetical pr... 27 8.7
AC024696-1|AAK84516.1| 348|Caenorhabditis elegans Hypothetical ... 27 8.7
>AL132860-13|CAB60509.1| 292|Caenorhabditis elegans Hypothetical
protein Y56A3A.15 protein.
Length = 292
Score = 33.1 bits (72), Expect = 0.17
Identities = 26/87 (29%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Frame = +1
Query: 301 KPFSVTIDVXSDIATDAVIKIFLGPKYNDXGF---PITLEENWHKFYELDWFTHKITPGQ 471
K F V I S+I + ++++F P ++ G PI + H FY L++F K+T
Sbjct: 143 KTFGVKI-ASSEIQSSHLLELF--PSLSNLGVYNVPINTQILTHNFYWLEFFKTKVTL-D 198
Query: 472 NKIVRNSNEFSLFKEDSLPXTDLMKFL 552
+ +V N ++FS+ + ++LP +L F+
Sbjct: 199 DILVSNCSKFSI-EYNNLPDKELNLFM 224
>Z49909-4|CAA90108.1| 876|Caenorhabditis elegans Hypothetical
protein C14A4.4a protein.
Length = 876
Score = 30.7 bits (66), Expect = 0.93
Identities = 23/109 (21%), Positives = 51/109 (46%), Gaps = 4/109 (3%)
Frame = +1
Query: 82 VGYINAFKHYLK----PYPQEKLHFVGVKINDVVVEKLVTFFDYSQFDATNSVFLTKKEI 249
V +N F Y+ YP+ L ++ ++ DVV++K D+ N++ +E
Sbjct: 371 VHVVNLFDTYVAMKKLKYPKFSLAYLTLRFADVVLDKQYQLADWRARPLRNAMINYARED 430
Query: 250 KTSYPHNFKVRQPRLNHKPFSVTIDVXSDIATDAVIKIFLGPKYNDXGF 396
+++ + + +L + +V S+ ++D IK++ P +N G+
Sbjct: 431 THYLLYSYDMLREQLLKQDTKDLANVYSE-SSDLCIKVYKKPVFNPKGY 478
>AY303577-1|AAP57299.1| 876|Caenorhabditis elegans cell
death-related nuclease 3 protein.
Length = 876
Score = 30.7 bits (66), Expect = 0.93
Identities = 23/109 (21%), Positives = 51/109 (46%), Gaps = 4/109 (3%)
Frame = +1
Query: 82 VGYINAFKHYLK----PYPQEKLHFVGVKINDVVVEKLVTFFDYSQFDATNSVFLTKKEI 249
V +N F Y+ YP+ L ++ ++ DVV++K D+ N++ +E
Sbjct: 371 VHVVNLFDTYVAMKKLKYPKFSLAYLTLRFADVVLDKQYQLADWRARPLRNAMINYARED 430
Query: 250 KTSYPHNFKVRQPRLNHKPFSVTIDVXSDIATDAVIKIFLGPKYNDXGF 396
+++ + + +L + +V S+ ++D IK++ P +N G+
Sbjct: 431 THYLLYSYDMLREQLLKQDTKDLANVYSE-SSDLCIKVYKKPVFNPKGY 478
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 550 LDEGKVPLYMSEGLECMPNRLMLPRGTEGGYP 645
+ G P M+ G+ MP+ +M PRG G YP
Sbjct: 129 MPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYP 160
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 550 LDEGKVPLYMSEGLECMPNRLMLPRGTEGGYP 645
+ G P M+ G+ MP+ +M PRG G YP
Sbjct: 129 MPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYP 160
>U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily
assigned gene nameprotein 59 protein.
Length = 1592
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = -3
Query: 288 WLTNLEVVWVTSLNLFFGQEYTVSGIKLAIVKECD*FLNDNIIDFNADEM 139
W+TNL + NL+F +Y + G L ++ + + +++ F EM
Sbjct: 142 WITNLHYAFQDEKNLYFVMDYYIGGDMLTLLSKFVDHIPESMAKFYIAEM 191
>AF025463-7|AAB71007.1| 1210|Caenorhabditis elegans Hypothetical
protein K10B4.1 protein.
Length = 1210
Score = 28.7 bits (61), Expect = 3.8
Identities = 22/94 (23%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Frame = +1
Query: 337 IATDAVIKIFLGPKYNDXGFPITLEENWHKFYELDWFTHKITPGQNKIVRNSNEFSLF-- 510
IA + V LGP + G + L+ KF + W+T+K+T Q + V+ ++ ++
Sbjct: 452 IAENPVYGSLLGPTF---GCIMALQFQKTKFGDTYWYTNKLTEDQLEEVKKTSISAMMCR 508
Query: 511 -KEDSLPXTDLMKFLDE-GKVPLYMSEGLECMPN 606
++ S+ D+ K D +P++ + + P+
Sbjct: 509 HQKTSIIQKDVFKAADNFQNIPIFCNSSVFAKPD 542
>AL132846-3|CAB60346.2| 1648|Caenorhabditis elegans Hypothetical
protein Y43D4A.5 protein.
Length = 1648
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 517 DSLPXTDLMKFLDEGKVPLYMSEG 588
D+LP T+L ++ D+ K+P Y G
Sbjct: 429 DALPATNLFRYPDQVKIPFYSPTG 452
>AC087081-18|AAK66030.1| 124|Caenorhabditis elegans Hypothetical
protein Y82E9BL.1 protein.
Length = 124
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = -3
Query: 468 PRSYLVREPIQFVEFMPVFFQCDGESXIVV 379
P+S L+R+PIQ V+ V CDGE+ + +
Sbjct: 93 PQS-LLRKPIQIVDDCSVKMYCDGEAKLFI 121
>U53146-1|AAA96111.1| 348|Caenorhabditis elegans Hypothetical
protein ZC411.1 protein.
Length = 348
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -1
Query: 614 INLFGMHSRPSDIYNGTFPSSKNFMRSVNG 525
INL P ++ GT+ ++NF++ V G
Sbjct: 235 INLLTGQKPPETVFQGTYVETRNFLKIVRG 264
>AC024696-1|AAK84516.1| 348|Caenorhabditis elegans Hypothetical
protein F07B7.7 protein.
Length = 348
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -1
Query: 614 INLFGMHSRPSDIYNGTFPSSKNFMRSVNG 525
INL P ++ GT+ ++NF++ V G
Sbjct: 235 INLLTGQKPPETVFQGTYVETRNFLKIVRG 264
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,241,545
Number of Sequences: 27780
Number of extensions: 287501
Number of successful extensions: 812
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 812
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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