Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_L08
(625 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical p... 32 0.38
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 29 3.6
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 29 3.6
Z68318-5|CAA92694.1| 418|Caenorhabditis elegans Hypothetical pr... 28 4.7
U49830-7|AAM98046.1| 774|Caenorhabditis elegans Neuronal igcam ... 27 8.2
U49830-6|AAK31481.1| 964|Caenorhabditis elegans Neuronal igcam ... 27 8.2
U49830-5|AAK31482.1| 1227|Caenorhabditis elegans Neuronal igcam ... 27 8.2
U49830-4|AAU20850.1| 1196|Caenorhabditis elegans Neuronal igcam ... 27 8.2
AF063007-3|AAC16431.2| 362|Caenorhabditis elegans Hypothetical ... 27 8.2
AF039719-12|AAB96758.1| 293|Caenorhabditis elegans Hypothetical... 27 8.2
>U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical
protein R11G1.1 protein.
Length = 1656
Score = 31.9 bits (69), Expect = 0.38
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +2
Query: 2 LGTCSLQQPGYYIEQYEDQPAPVCQL-QAAPSKRVHLTVNS--PRHLR 136
+G S +QP + I Y D P P L PS+ V NS PRH R
Sbjct: 1561 VGDLSKRQPNWDISPYRDTPGPSSFLPPITPSRHVRTAANSPQPRHRR 1608
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Frame = +1
Query: 439 QHCQCQSGLHVQGQDW-CICDR--RSDRC 516
Q C CQ+G H G D C+C + D+C
Sbjct: 1512 QSCSCQNGAHCDGADGRCLCPAGFQGDKC 1540
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Frame = +1
Query: 439 QHCQCQSGLHVQGQDW-CICDR--RSDRC 516
Q C CQ+G H G D C+C + D+C
Sbjct: 1512 QSCSCQNGAHCDGADGRCLCPAGFQGDKC 1540
>Z68318-5|CAA92694.1| 418|Caenorhabditis elegans Hypothetical
protein T21B10.4 protein.
Length = 418
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2
Query: 335 RLPAKVNLFHNDHHDFSAKAFATKNLPNIPQVPNFNTVS 451
R P K+ D H F+A F T N+ N+ Q + TVS
Sbjct: 85 RFPPKIMTIREDDHSFNANIF-TLNVSNVFQQISSKTVS 122
>U49830-7|AAM98046.1| 774|Caenorhabditis elegans Neuronal igcam
protein 6, isoform c protein.
Length = 774
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +2
Query: 83 AAPSKRVHLTVNSPRHLRCYGQGTYNWYNDTITSSLPLCSVDLTKPNEV-CGARYQLGLG 259
A+ R+H + P G+ DT T+ L S++L KPN G Y++ +
Sbjct: 624 ASKKFRIHTKQHPPSETPLIGKLMMKQMKDTYTTILEWSSIELQKPNRTENGCGYKIFIY 683
Query: 260 LS 265
+S
Sbjct: 684 IS 685
>U49830-6|AAK31481.1| 964|Caenorhabditis elegans Neuronal igcam
protein 6, isoform a protein.
Length = 964
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +2
Query: 83 AAPSKRVHLTVNSPRHLRCYGQGTYNWYNDTITSSLPLCSVDLTKPNEV-CGARYQLGLG 259
A+ R+H + P G+ DT T+ L S++L KPN G Y++ +
Sbjct: 814 ASKKFRIHTKQHPPSETPLIGKLMMKQMKDTYTTILEWSSIELQKPNRTENGCGYKIFIY 873
Query: 260 LS 265
+S
Sbjct: 874 IS 875
>U49830-5|AAK31482.1| 1227|Caenorhabditis elegans Neuronal igcam
protein 6, isoform b protein.
Length = 1227
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +2
Query: 83 AAPSKRVHLTVNSPRHLRCYGQGTYNWYNDTITSSLPLCSVDLTKPNEV-CGARYQLGLG 259
A+ R+H + P G+ DT T+ L S++L KPN G Y++ +
Sbjct: 1077 ASKKFRIHTKQHPPSETPLIGKLMMKQMKDTYTTILEWSSIELQKPNRTENGCGYKIFIY 1136
Query: 260 LS 265
+S
Sbjct: 1137 IS 1138
>U49830-4|AAU20850.1| 1196|Caenorhabditis elegans Neuronal igcam
protein 6, isoform d protein.
Length = 1196
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +2
Query: 83 AAPSKRVHLTVNSPRHLRCYGQGTYNWYNDTITSSLPLCSVDLTKPNEV-CGARYQLGLG 259
A+ R+H + P G+ DT T+ L S++L KPN G Y++ +
Sbjct: 1046 ASKKFRIHTKQHPPSETPLIGKLMMKQMKDTYTTILEWSSIELQKPNRTENGCGYKIFIY 1105
Query: 260 LS 265
+S
Sbjct: 1106 IS 1107
>AF063007-3|AAC16431.2| 362|Caenorhabditis elegans Hypothetical
protein R119.2 protein.
Length = 362
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -2
Query: 309 MSFSEGRSRVRLTYVDKPSPSWYRAPQTSFGLVRSTEHK 193
++++ +VRL+ + + A T GL+RST+HK
Sbjct: 226 LTYAHSMEKVRLSALFRRMNELLAASFTELGLIRSTDHK 264
>AF039719-12|AAB96758.1| 293|Caenorhabditis elegans Hypothetical
protein K04F10.7 protein.
Length = 293
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +1
Query: 382 QCQSIRH*KPAKYSSSSELQHCQCQSGLHVQGQDWC 489
QCQ + AKY Q+C+ + H Q WC
Sbjct: 25 QCQKCQK-NEAKYGKPGTCQYCKLNAAFHDQKCVWC 59
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,968,107
Number of Sequences: 27780
Number of extensions: 355340
Number of successful extensions: 966
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 966
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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