Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_L07
(596 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0336 + 22121913-22122111,22122295-22122344,22122538-221226... 122 3e-28
10_01_0315 - 3454846-3455465,3455562-3455663,3455828-3455954,345... 117 8e-27
04_04_0116 + 22877296-22877482,22877578-22877627,22879057-228791... 106 2e-23
03_03_0155 - 14933469-14934335,14934529-14934578,14935435-14935447 103 1e-22
04_04_0115 + 22868554-22868749,22868863-22868912,22870009-228701... 101 4e-22
09_01_0042 + 764349-764763,764853-764902,765096-765172,766179-76... 85 4e-17
01_01_0385 + 2981293-2981345,2981803-2981851,2982215-2984953 35 0.043
07_03_1098 + 23942933-23943025,23943051-23943749 30 1.6
06_01_0260 + 1923865-1924290 29 3.7
02_01_0655 + 4867737-4868642 29 3.7
01_02_0099 + 11092529-11093140,11094153-11094424,11095378-110954... 28 4.9
08_01_0693 + 6131714-6132531,6133038-6135027 28 6.5
05_04_0052 - 17515344-17517353 27 8.6
02_02_0340 + 9135846-9138377 27 8.6
>02_04_0336 +
22121913-22122111,22122295-22122344,22122538-22122661,
22122810-22122917,22123610-22124265
Length = 378
Score = 122 bits (293), Expect = 3e-28
Identities = 66/168 (39%), Positives = 93/168 (55%), Gaps = 6/168 (3%)
Frame = +3
Query: 96 FSLSAISYGAIVQAIQVPDKFGILKDIVLGFDNIEAYVTRNLPYLGATVGRCANRIGGAT 275
FS+ ++GA + ++ +PD G L D+VLG+D + YV Y G +GR ANRI A
Sbjct: 46 FSIRVTNWGATIMSVILPDSKGNLADVVLGYDTVAEYVN-GTAYFGGLIGRVANRIANAR 104
Query: 276 FKIDGATYHVAKNKGDNHLHGGTVGFNKVNW--KTSV---DGTKVTFSHLSPDGDEGYPG 440
F +DG TY + +N G+N LHGG GF+KV W K V D ++T + S DG++G+PG
Sbjct: 105 FTLDGKTYRLFRNDGNNSLHGGHRGFSKVIWTVKEHVAGGDSPRITLYYHSFDGEQGFPG 164
Query: 441 DLVTNVTYNVSDDDSFHVEFIAXXXXXXX-XXXXXHSYFNLAGDDAGA 581
DL VTY + V A H+Y+NLAG+ +GA
Sbjct: 165 DLDVFVTYELPRPYVLAVRMNATARGKATPVNLAHHAYWNLAGEGSGA 212
>10_01_0315 -
3454846-3455465,3455562-3455663,3455828-3455954,
3456698-3456727,3456828-3456877,3457004-3457106
Length = 343
Score = 117 bits (281), Expect = 8e-27
Identities = 63/169 (37%), Positives = 92/169 (54%), Gaps = 14/169 (8%)
Frame = +3
Query: 114 SYGAIVQAIQVPDKFGILKDIVLGFDNIEAYVT---------RNL-PYLGATVGRCANRI 263
++GA + ++ VPD G L D+VLGFD +E Y+ + + PY G VGR ANRI
Sbjct: 20 AWGATITSLIVPDAHGNLADVVLGFDTLEPYMEYVGTGKGGQKGISPYFGCIVGRVANRI 79
Query: 264 GGATFKIDGATYHVAKNKGDNHLHGGTVGFNKVNW---KTSVDGTKVTFSHLSPDGDEGY 434
F ++G Y +A N G N LHGG GF+KV W + + +TF + S DG+EGY
Sbjct: 80 KEGKFTLNGVEYSLAINNGPNSLHGGLKGFDKVVWDVVERKSECPSITFQYHSKDGEEGY 139
Query: 435 PGDLVTNVTYNVSDDDSFHVEFIAXXXXXXX-XXXXXHSYFNLAGDDAG 578
PGD+ TY++ D + ++ A H+Y+NLAG ++G
Sbjct: 140 PGDVTVRATYSLPDSTTLRLDMEAVAENKATPINLAQHTYWNLAGHNSG 188
>04_04_0116 +
22877296-22877482,22877578-22877627,22879057-22879180,
22879266-22879373,22879462-22880084
Length = 363
Score = 106 bits (254), Expect = 2e-23
Identities = 63/179 (35%), Positives = 85/179 (47%), Gaps = 6/179 (3%)
Frame = +3
Query: 60 TVWKYTWRTSSGFSLSAISYGAIVQAIQVPDKFGILKDIVLGFDNIEAYVTRNLPYLGAT 239
TV +Y R FS+ ++GA + ++ +PD G L D+VLG D I YV + Y G
Sbjct: 31 TVGEYVLRKGD-FSVKITNWGATMMSVVLPDSKGNLADVVLGLDTIAEYVN-DTNYFGPV 88
Query: 240 VGRCANRIGGATFKIDGATYHVAKNKGDNHLHGGTVGFNKVNWKTSV-----DGTKVTFS 404
GR RI F +DG YH N G N +HGG GF+KV W D +T
Sbjct: 89 TGRVGQRIARGRFVLDGKVYHTYINDGRNAIHGGHRGFSKVIWTVKEYVGGGDSPYITLY 148
Query: 405 HLSPDGDEGYPGDLVTNVTYNVSDDDSFHVEFIAXXXXXXX-XXXXXHSYFNLAGDDAG 578
+ S DG++G+PGDL VTY +S + A H+Y+NL G G
Sbjct: 149 YRSFDGEQGFPGDLDAYVTYQLSSPYVLALRMNATALNKATPVNFLQHTYWNLGGQGRG 207
>03_03_0155 - 14933469-14934335,14934529-14934578,14935435-14935447
Length = 309
Score = 103 bits (246), Expect = 1e-22
Identities = 59/147 (40%), Positives = 76/147 (51%), Gaps = 7/147 (4%)
Frame = +3
Query: 159 GILKDIVLGFDNIEAYVTRNLPYLGATVGRCANRIGGATFKIDGATYHVAKNKGDNHLHG 338
G + D+VLG+ +I +YV + Y GA VGR ANRI G F + G +H KN G N LHG
Sbjct: 5 GHIDDVVLGYKDIGSYVN-DTTYFGALVGRVANRIAGGRFTVKGHAFHTYKNDGKNTLHG 63
Query: 339 GTVGFNKVNWKTSVDGT----KVTFSHLSPDGDEGYPGDLVTNVTYNVSDDDSFHVEFIA 506
G GFN+V W T +TF + S DG++G+PG L VTY + D SF V A
Sbjct: 64 GHRGFNQVFWSVRERATGHFPYITFYYRSYDGEQGFPGALDVLVTYKIDGDYSFSVTMYA 123
Query: 507 ---XXXXXXXXXXXXHSYFNLAGDDAG 578
H+Y+NL G G
Sbjct: 124 RPVDDGKPTPVNLAQHTYWNLRGHGNG 150
>04_04_0115 +
22868554-22868749,22868863-22868912,22870009-22870195,
22870226-22870333,22872501-22873165
Length = 401
Score = 101 bits (242), Expect = 4e-22
Identities = 72/201 (35%), Positives = 94/201 (46%), Gaps = 27/201 (13%)
Frame = +3
Query: 57 TTVWKYTWRTSSGFSLSAISYGAIVQAIQVPDKFGILKDIVLGFDNIEAYVTRNLPYLGA 236
TTV Y R FS+ ++GA++ ++ +PD G L D+VLG+D I YV + Y GA
Sbjct: 33 TTVGVYELRKGD-FSIRVTNWGAVIMSVVLPDSRGKLDDVVLGYDTIAEYVNSST-YFGA 90
Query: 237 TVGRCANRIGGATFKIDGATYHVAKNKGDNHLHG---------------------GTVGF 353
VGR ANRI A F +DG YH+ N G N LHG G GF
Sbjct: 91 LVGRVANRIAKARFVLDGKAYHLYPNDGKNTLHGILEKFPEVQEIHGAWFISTNSGHRGF 150
Query: 354 NKVNW--KTSV---DGTKVTFSHLSPDGDEGYPGDLVTNVTYNVSDDDSFHVEFIAXXXX 518
+ V W K V D +T + S DG++G+PG L VTY +S V A
Sbjct: 151 SNVTWTVKEHVGGGDAPYITLYYHSFDGEQGFPGALDVYVTYQLSGPYVLSVHMNATAAG 210
Query: 519 XXX-XXXXXHSYFNLAGDDAG 578
HSY+NL G +G
Sbjct: 211 KATPVNLAQHSYWNLGGTGSG 231
>09_01_0042 +
764349-764763,764853-764902,765096-765172,766179-766236,
767481-767607,768665-768769,768842-769424,769470-769775,
770048-770139,770391-770440
Length = 620
Score = 85.0 bits (201), Expect = 4e-17
Identities = 43/124 (34%), Positives = 64/124 (51%), Gaps = 5/124 (4%)
Frame = +3
Query: 222 PYLGATVGRCANRIGGATFKIDGATYHVAKNKGDNHLHGGTVGFNKVNWKTSV----DGT 389
PY G VGR ANRI F ++ Y +A N N LHGG GF+K+ W+ + +
Sbjct: 205 PYFGCIVGRVANRIKDGKFTLNDKQYSLAINNPPNTLHGGFKGFDKIIWEVAEYVKGENP 264
Query: 390 KVTFSHLSPDGDEGYPGDLVTNVTYNVSDDDSFHVEFIAX-XXXXXXXXXXXHSYFNLAG 566
+TF + S DG+EG+PGD+ Y++ + +E A H+Y+NLAG
Sbjct: 265 SITFKYYSKDGEEGFPGDVSVTARYSILASTTLKLEMEAIPLNKATPISLAQHTYWNLAG 324
Query: 567 DDAG 578
++G
Sbjct: 325 HNSG 328
Score = 37.9 bits (84), Expect = 0.006
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = +3
Query: 120 GAIVQAIQVPDKFGILKDIVLGFDNIEAY 206
GA V ++ VPD G+L D+VLGFD+++ Y
Sbjct: 126 GATVTSLLVPDNNGVLGDVVLGFDSLDPY 154
>01_01_0385 + 2981293-2981345,2981803-2981851,2982215-2984953
Length = 946
Score = 35.1 bits (77), Expect = 0.043
Identities = 23/72 (31%), Positives = 29/72 (40%)
Frame = +3
Query: 216 NLPYLGATVGRCANRIGGATFKIDGATYHVAKNKGDNHLHGGTVGFNKVNWKTSVDGTKV 395
N P GAT G A +++ A A D L G GF KV DGTKV
Sbjct: 559 NTPGGGATPGMAAAASSSPSYRFPFAALQDATGNFDEGLVIGEGGFGKVYAAVLQDGTKV 618
Query: 396 TFSHLSPDGDEG 431
+P+ +G
Sbjct: 619 AVKRANPESRQG 630
>07_03_1098 + 23942933-23943025,23943051-23943749
Length = 263
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +3
Query: 201 AYVTRNLPYLGATVGRCANRIGGATFKIDGATYHVAKNKGDNHLHGGTV 347
A V ++L Y A GR N +GGA + G ++H+ + D L GG +
Sbjct: 98 AAVFQSLLYEAA--GRTINPVGGAVGLLSGGSWHLCQAAVDTVLRGGGI 144
>06_01_0260 + 1923865-1924290
Length = 141
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +3
Query: 297 YHVAKNKGDNHLHGGTVGFNKVNWKTSVDGTKVTF 401
Y + GD LHGG G K W TS DG +T+
Sbjct: 12 YMIVLGHGDV-LHGGGGGETKRMWATSQDGWVITY 45
>02_01_0655 + 4867737-4868642
Length = 301
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 368 ENVRRRYKSHLQSPITRRRRGLPGRSGHKCHLQ 466
E +RR + H T RG+PGRSG C L+
Sbjct: 20 EALRRLVERHGARNWTAIGRGIPGRSGKSCRLR 52
>01_02_0099 +
11092529-11093140,11094153-11094424,11095378-11095438,
11095553-11095622,11095645-11095901,11096466-11096639
Length = 481
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +3
Query: 210 TRNLPYLGATVGRCANRIGGATFKIDGATYHVAK--NKGDNHLHGGTVGFNKVNWKTSVD 383
TR + +V AN T + + H+A +K DN GG + + VNW +++
Sbjct: 185 TRRHEFRRCSVCGAANYSSRGTGEASPKSGHLAAVLSKNDNRWRGGEIQASAVNWLAAME 244
Query: 384 G 386
G
Sbjct: 245 G 245
>08_01_0693 + 6131714-6132531,6133038-6135027
Length = 935
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 165 LKDIVLGFDNIEAYVTRNLPYLGATVGRCAN 257
L+D+ L FD E+ NL LG++VG+ N
Sbjct: 703 LRDLRLYFDGKESSTASNLDSLGSSVGKLQN 733
>05_04_0052 - 17515344-17517353
Length = 669
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 5/31 (16%)
Frame = +3
Query: 261 IGGATFK-----IDGATYHVAKNKGDNHLHG 338
+GG TF IDG Y V GD HL G
Sbjct: 237 LGGGTFDVSVLAIDGGVYEVLATNGDTHLGG 267
>02_02_0340 + 9135846-9138377
Length = 843
Score = 27.5 bits (58), Expect = 8.6
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 8/83 (9%)
Frame = +3
Query: 189 DNIEAYVTRNLPYLGATVGRCANRIGGATFKI--DGATY--HVAKNKGDNHLHGGTVGFN 356
D I V L T+G C + ++ + A Y H AK++ D + G + FN
Sbjct: 107 DGIRGQVLHGRHALRHTIGNCLSCFSSSSSSSVPEDANYPHHTAKSRSDESDYVGKLTFN 166
Query: 357 KVNW----KTSVDGTKVTFSHLS 413
+V+ K+ ++G SH+S
Sbjct: 167 RVDMSKKIKSVIEGIYDLCSHVS 189
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,290,353
Number of Sequences: 37544
Number of extensions: 354449
Number of successful extensions: 954
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 941
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1423789920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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