Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_L07
(596 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF125952-4|AAD14698.1| 330|Caenorhabditis elegans Hypothetical ... 105 2e-23
AC006722-10|ABP57811.1| 330|Caenorhabditis elegans Hypothetical... 105 2e-23
Z69646-7|CAA93471.3| 1484|Caenorhabditis elegans Hypothetical pr... 30 1.4
AF003141-12|AAP68910.1| 946|Caenorhabditis elegans Hypothetical... 29 2.5
AF003141-11|AAP68909.1| 1437|Caenorhabditis elegans Hypothetical... 29 2.5
U39745-7|AAA80449.1| 612|Caenorhabditis elegans Uncoordinated p... 28 4.4
U39678-10|AAV28360.1| 436|Caenorhabditis elegans Hypothetical p... 28 4.4
M80241-1|AAA28157.1| 612|Caenorhabditis elegans unc-6 protein. 28 4.4
AF003130-18|AAO38640.1| 441|Caenorhabditis elegans Prion-like-(... 28 4.4
AF003130-17|AAB54127.1| 470|Caenorhabditis elegans Prion-like-(... 28 4.4
AF003130-16|AAK68879.1| 457|Caenorhabditis elegans Prion-like-(... 28 4.4
AF003130-15|AAM45365.1| 465|Caenorhabditis elegans Prion-like-(... 28 4.4
AL031635-6|CAA21044.1| 761|Caenorhabditis elegans Hypothetical ... 28 5.8
>AF125952-4|AAD14698.1| 330|Caenorhabditis elegans Hypothetical
protein C01B4.6 protein.
Length = 330
Score = 105 bits (253), Expect = 2e-23
Identities = 57/164 (34%), Positives = 86/164 (52%), Gaps = 1/164 (0%)
Frame = +3
Query: 93 GFSLSAISYGAIVQAIQVPDKFGILKDIVLGFDNIEAYVTRNLPYLGATVGRCANRIGGA 272
G + + + +GA + + PDK G +D+VLGFD I+ + ++ +G TVGR ANRI +
Sbjct: 13 GLTATLLPFGATLAKLTFPDKNGKNQDLVLGFDTIDEF-EKDAASIGKTVGRVANRIKNS 71
Query: 273 TFKIDGATYHVAKNKGDNHLHGGTVGFNKVNWKTSVDGTK-VTFSHLSPDGDEGYPGDLV 449
T DG Y + N G ++LHGG G W+ + V+FS + + D+G PGD
Sbjct: 72 TLHFDGKQYTMTPNNGPHYLHGGPNGLGYRKWEVVRHAPESVSFSVRANEQDDGLPGDAK 131
Query: 450 TNVTYNVSDDDSFHVEFIAXXXXXXXXXXXXHSYFNLAGDDAGA 581
+VTY V+D + +E A H+Y+NL G D A
Sbjct: 132 IDVTYTVNDRNQLIIEHHATCDTPGLLALTNHAYWNLDGSDTVA 175
>AC006722-10|ABP57811.1| 330|Caenorhabditis elegans Hypothetical
protein Y19D10A.16 protein.
Length = 330
Score = 105 bits (253), Expect = 2e-23
Identities = 57/164 (34%), Positives = 86/164 (52%), Gaps = 1/164 (0%)
Frame = +3
Query: 93 GFSLSAISYGAIVQAIQVPDKFGILKDIVLGFDNIEAYVTRNLPYLGATVGRCANRIGGA 272
G + + + +GA + + PDK G +D+VLGFD I+ + ++ +G TVGR ANRI +
Sbjct: 13 GLTATLLPFGATLAKLTFPDKNGKNQDLVLGFDTIDEF-EKDAASIGKTVGRVANRIKNS 71
Query: 273 TFKIDGATYHVAKNKGDNHLHGGTVGFNKVNWKTSVDGTK-VTFSHLSPDGDEGYPGDLV 449
T DG Y + N G ++LHGG G W+ + V+FS + + D+G PGD
Sbjct: 72 TLHFDGKQYTMTPNNGPHYLHGGPNGLGYRKWEVVRHAPESVSFSVRANEQDDGLPGDAK 131
Query: 450 TNVTYNVSDDDSFHVEFIAXXXXXXXXXXXXHSYFNLAGDDAGA 581
+VTY V+D + +E A H+Y+NL G D A
Sbjct: 132 IDVTYTVNDRNQLIIEHHATCDTPGLLALTNHAYWNLDGSDTVA 175
>Z69646-7|CAA93471.3| 1484|Caenorhabditis elegans Hypothetical
protein F57C7.4 protein.
Length = 1484
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = -2
Query: 232 PKYGKFRVT*ASMLSNPSTISLRIPNLSGT*MACTIAP 119
P++G F ++ S +SNP+TI +P+ S ++ TI P
Sbjct: 659 PQFGYFNIS--SFISNPTTIIKNVPSKSDVFVSFTIPP 694
>AF003141-12|AAP68910.1| 946|Caenorhabditis elegans Hypothetical
protein W02D3.10b protein.
Length = 946
Score = 29.1 bits (62), Expect = 2.5
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +3
Query: 138 IQVPDKFGILKDIVLGFDNIEAY-VTRNLPYLGATVGRCANRIGGATFKIDGATYHVAKN 314
+ VP+ FG+ D+++ +NI Y +T+ + Y+ + R A + D T +VA+
Sbjct: 118 VSVPNFFGMYNDLMVQVENISNYGLTQLVDYVSIMLKRANEWKDQAEGEADD-TENVARG 176
Query: 315 KGDNHLHGGTVGFNKVNWKTSV 380
K +N + FN+ WK V
Sbjct: 177 KNNN----SKMSFNQ-RWKDFV 193
>AF003141-11|AAP68909.1| 1437|Caenorhabditis elegans Hypothetical
protein W02D3.10a protein.
Length = 1437
Score = 29.1 bits (62), Expect = 2.5
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +3
Query: 138 IQVPDKFGILKDIVLGFDNIEAY-VTRNLPYLGATVGRCANRIGGATFKIDGATYHVAKN 314
+ VP+ FG+ D+++ +NI Y +T+ + Y+ + R A + D T +VA+
Sbjct: 118 VSVPNFFGMYNDLMVQVENISNYGLTQLVDYVSIMLKRANEWKDQAEGEADD-TENVARG 176
Query: 315 KGDNHLHGGTVGFNKVNWKTSV 380
K +N + FN+ WK V
Sbjct: 177 KNNN----SKMSFNQ-RWKDFV 193
>U39745-7|AAA80449.1| 612|Caenorhabditis elegans Uncoordinated
protein 6 protein.
Length = 612
Score = 28.3 bits (60), Expect = 4.4
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +3
Query: 363 NWKTSVDGTKVTFSHLSPDGDEGYPGDLVTNVTYNVSDDD 482
+W T+ D KV FS LSPD E Y N N +DD+
Sbjct: 235 DWVTATD-IKVVFSRLSPDQAELYGLSNDVNSYGNETDDE 273
>U39678-10|AAV28360.1| 436|Caenorhabditis elegans Hypothetical
protein C39D10.11 protein.
Length = 436
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = -1
Query: 389 CTVDGRFPVNLIKAHSASVQMVVALVLRYMVSCTV 285
C ++GRF + L+K+H + ++ + L + +CTV
Sbjct: 60 CFINGRFLLGLLKSHEDNSFHLMTISLNHDQTCTV 94
>M80241-1|AAA28157.1| 612|Caenorhabditis elegans unc-6 protein.
Length = 612
Score = 28.3 bits (60), Expect = 4.4
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +3
Query: 363 NWKTSVDGTKVTFSHLSPDGDEGYPGDLVTNVTYNVSDDD 482
+W T+ D KV FS LSPD E Y N N +DD+
Sbjct: 235 DWVTATD-IKVVFSRLSPDQAELYGLSNDVNSYGNETDDE 273
>AF003130-18|AAO38640.1| 441|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 44,
isoform d protein.
Length = 441
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 41 RNLQQYHCVEIYLEDFKWILTVGNILRSYRTGHSGT 148
R L++Y C ++ DF +++ N LR+Y H GT
Sbjct: 296 RKLERYMCSRFFI-DFPDLISQENKLRNYLDSHFGT 330
>AF003130-17|AAB54127.1| 470|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 44,
isoform a protein.
Length = 470
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 41 RNLQQYHCVEIYLEDFKWILTVGNILRSYRTGHSGT 148
R L++Y C ++ DF +++ N LR+Y H GT
Sbjct: 325 RKLERYMCSRFFI-DFPDLISQENKLRNYLDSHFGT 359
>AF003130-16|AAK68879.1| 457|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 44,
isoform b protein.
Length = 457
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 41 RNLQQYHCVEIYLEDFKWILTVGNILRSYRTGHSGT 148
R L++Y C ++ DF +++ N LR+Y H GT
Sbjct: 312 RKLERYMCSRFFI-DFPDLISQENKLRNYLDSHFGT 346
>AF003130-15|AAM45365.1| 465|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 44,
isoform c protein.
Length = 465
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 41 RNLQQYHCVEIYLEDFKWILTVGNILRSYRTGHSGT 148
R L++Y C ++ DF +++ N LR+Y H GT
Sbjct: 320 RKLERYMCSRFFI-DFPDLISQENKLRNYLDSHFGT 354
>AL031635-6|CAA21044.1| 761|Caenorhabditis elegans Hypothetical
protein Y47D3B.9 protein.
Length = 761
Score = 27.9 bits (59), Expect = 5.8
Identities = 31/116 (26%), Positives = 47/116 (40%)
Frame = +3
Query: 144 VPDKFGILKDIVLGFDNIEAYVTRNLPYLGATVGRCANRIGGATFKIDGATYHVAKNKGD 323
+P KF +DI F + EA + +P L + G + +F + A+N G
Sbjct: 127 IPSKF---EDIESQFFS-EATIRDLMPVLASVQGSPPHNQNQLSFGSTSSPSAWARNAGR 182
Query: 324 NHLHGGTVGFNKVNWKTSVDGTKVTFSHLSPDGDEGYPGDLVTNVTYNVSDDDSFH 491
H F + T G V H S GD+ P +L T++ SDD F+
Sbjct: 183 KKSHPVWDFFKDMKDSTGAGG--VICLHCSWSGDDRSPNNLRTHLKKFHSDDGIFN 236
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,849,119
Number of Sequences: 27780
Number of extensions: 301816
Number of successful extensions: 868
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 864
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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