Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_L03
         (634 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    30   0.016
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           30   0.016
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   3.3  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    22   5.7  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    22   5.7  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   7.5  

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 30.3 bits (65), Expect = 0.016
 Identities = 17/43 (39%), Positives = 25/43 (58%)
 Frame = +2

Query: 14  TRVNFIKMVKVDIKYTKLFINNEWVDAVSKKTFPTINPQDESV 142
           T  N IKM KV I +   F+NN  V  V+   +P +NP ++S+
Sbjct: 481 TTTNDIKMQKVLIDFWVSFVNN-GVPNVNSVQWPRLNPNEKSL 522



 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +2

Query: 539 SSLWLAGWTVVVKPAEQTPLTAL 607
           SSL   GWT+   P  +TPL A+
Sbjct: 10  SSLVTFGWTLEDAPRVKTPLGAI 32


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 30.3 bits (65), Expect = 0.016
 Identities = 17/43 (39%), Positives = 25/43 (58%)
 Frame = +2

Query: 14  TRVNFIKMVKVDIKYTKLFINNEWVDAVSKKTFPTINPQDESV 142
           T  N IKM KV I +   F+NN  V  V+   +P +NP ++S+
Sbjct: 481 TTTNDIKMQKVLIDFWVSFVNN-GVPNVNSVQWPRLNPNEKSL 522



 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +2

Query: 539 SSLWLAGWTVVVKPAEQTPLTAL 607
           SSL   GWT+   P  +TPL A+
Sbjct: 10  SSLVTFGWTLEDAPRVKTPLGAI 32


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +2

Query: 17  RVNFIKMVKVDIKYTKLFINNEWVDAVSKKTF 112
           R+  +  + V      LFINN +++ V   TF
Sbjct: 606 RITELSPLSVPDSVELLFINNNYINLVRPNTF 637


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 362 VLWASGIVRYYAGKADKI 415
           + WA G+ R+Y G  D I
Sbjct: 466 ISWAFGVNRFYDGIRDMI 483


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 362 VLWASGIVRYYAGKADKI 415
           + WA G+ R+Y G  D I
Sbjct: 519 ISWAFGVNRFYDGIRDMI 536


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = -2

Query: 588 CSAGFTTTVQPASQRLEPIFHMNIGI 511
           C A +   V P S    P+FH  + +
Sbjct: 383 CPADWLWIVPPISGSATPVFHQEMAL 408


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,361
Number of Sequences: 438
Number of extensions: 3258
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18949215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)