Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_L01
         (613 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    25   0.58 
DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    22   4.1  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   4.1  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    22   4.1  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            22   4.1  
DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    22   5.4  
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    22   5.4  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    22   5.4  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   7.2  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   7.2  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 25.0 bits (52), Expect = 0.58
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = +1

Query: 322 LCTLSRQRSGSVRTILTMIGSTSLDSFTISERLWPSTRSRNG 447
           +C L+  +SG+V  ++   G T    FTI+ ++   T    G
Sbjct: 38  VCALNELKSGAVYKVVDQTGPTHAPIFTIAVQIDGQTYEGKG 79


>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 513 SFKDNPDTYNPKYNTEY 563
           ++ +N + YN  YNT Y
Sbjct: 93  NYNNNYNNYNNNYNTNY 109


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 10/35 (28%), Positives = 14/35 (40%)
 Frame = +3

Query: 486 GKSIVYGDDSFKDNPDTYNPKYNTEYGMYEPNCGL 590
           G ++V+  D    NP   N  Y   Y +    C L
Sbjct: 336 GNTLVFLFDLIGRNPTVQNKLYEETYALAPAGCDL 370


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = -3

Query: 434 LVEGHNLSEIVNESNE 387
           ++ G  L+EI+NE++E
Sbjct: 45  IINGKKLTEIINETHE 60


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
 Frame = +3

Query: 492 SIVYGD--DSFKDNPDTYNPKYNTEYGM 569
           S+V+ D  D+ +DNP     KY+  Y M
Sbjct: 301 SLVFVDNHDTQRDNPQILTYKYSKRYKM 328


>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
           protein.
          Length = 125

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = -1

Query: 223 IIHFTLDEINCHVRVHIIIGFTDSHLDRIVFIHRVIT 113
           I+ F L  I C +       + D  +DRI+   R++T
Sbjct: 5   ILLFVLVTITCVIAEDYTTKYDDMDIDRILQNGRILT 41


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
           protein.
          Length = 125

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = -1

Query: 223 IIHFTLDEINCHVRVHIIIGFTDSHLDRIVFIHRVIT 113
           I+ F L  I C +       + D  +DRI+   R++T
Sbjct: 5   ILLFVLVTITCVIAEDYTTKYDDMDIDRILQNGRILT 41


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 28  TRIPGVRYGPVASTPTRG 81
           T + GV Y PV  TP+ G
Sbjct: 838 TTMAGVIYPPVIGTPSTG 855


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/19 (36%), Positives = 16/19 (84%)
 Frame = +2

Query: 242 FKSTIKDALIKLNDLVDES 298
           FK+  ++ LIK++D+++E+
Sbjct: 221 FKNLPEETLIKISDVLEET 239


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +2

Query: 188 MTVDFVKGKMDN 223
           M+VDF+KG + N
Sbjct: 184 MSVDFIKGSISN 195


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,462
Number of Sequences: 438
Number of extensions: 3937
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18093444
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)