Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_K22
         (592 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82060-2|CAB04882.1|  421|Caenorhabditis elegans Hypothetical pr...    27   10.0 
Z67755-9|CAM33504.2|  224|Caenorhabditis elegans Hypothetical pr...    27   10.0 

>Z82060-2|CAB04882.1|  421|Caenorhabditis elegans Hypothetical
           protein T27F6.2 protein.
          Length = 421

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +2

Query: 221 FCLSLAMTSQYGASPRAFLFETYC 292
           +CL+++ T+ +G+SP  F F T C
Sbjct: 253 YCLTMS-TTNFGSSPAGFWFSTNC 275


>Z67755-9|CAM33504.2|  224|Caenorhabditis elegans Hypothetical
           protein F54F7.9 protein.
          Length = 224

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +2

Query: 116 YESMVSNRKYLQMSLFYAIKTLLICCFNEPYTP 214
           YE MVSN +  Q SL + ++ +  C F+    P
Sbjct: 137 YEKMVSNEEKSQFSLSFLMRGVADCAFSHLVCP 169


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,672,535
Number of Sequences: 27780
Number of extensions: 288892
Number of successful extensions: 553
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 553
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)