Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_K21
         (185 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    35   0.007
AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like...    34   0.015
Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical pr...    29   0.33 
U97408-1|AAB93344.2|  360|Caenorhabditis elegans Trypsin-like pr...    28   1.0  
AF003134-1|AAB54144.1|  522|Caenorhabditis elegans Trypsin-like ...    27   1.3  
U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like p...    27   1.8  
AC084153-7|AAK84593.1|  451|Caenorhabditis elegans Hypothetical ...    26   3.1  
U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like pr...    26   4.1  
AF078157-12|AAG24073.1|  338|Caenorhabditis elegans Hypothetical...    26   4.1  
Z68303-12|CAA92644.2|  969|Caenorhabditis elegans Hypothetical p...    25   5.4  
Z68303-1|CAC42387.1|  475|Caenorhabditis elegans Hypothetical pr...    25   5.4  
Z68302-9|CAA92636.2|  969|Caenorhabditis elegans Hypothetical pr...    25   5.4  
Z68219-8|CAD59155.1|  430|Caenorhabditis elegans Hypothetical pr...    25   7.1  
Z68219-1|CAA92481.2|  387|Caenorhabditis elegans Hypothetical pr...    25   7.1  
Z68216-7|CAD59147.1|  430|Caenorhabditis elegans Hypothetical pr...    25   7.1  
AC024810-11|AAK68516.2|  165|Caenorhabditis elegans Hypothetical...    25   7.1  
Z92832-5|CAB07374.2|  292|Caenorhabditis elegans Hypothetical pr...    25   9.4  
U97403-2|AAB52472.2|  649|Caenorhabditis elegans Hypothetical pr...    25   9.4  
AL132862-14|CAB60548.1|  541|Caenorhabditis elegans Hypothetical...    25   9.4  

>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 35.1 bits (77), Expect = 0.007
 Identities = 19/43 (44%), Positives = 25/43 (58%)
 Frame = +3

Query: 3   CGGSLISSKYVLTAAHCVTGAILIEGTPKNVRLGEYNTTNNGP 131
           CGGSLI   +VLTAAHC   A     T  +VR+G + + +  P
Sbjct: 84  CGGSLIDPNFVLTAAHCF--AKDRRPTSYSVRVGGHRSGSGSP 124


>AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like
           protease protein 5 protein.
          Length = 331

 Score = 33.9 bits (74), Expect = 0.015
 Identities = 13/17 (76%), Positives = 16/17 (94%)
 Frame = +3

Query: 3   CGGSLISSKYVLTAAHC 53
           CGG+LI+ K+VLTAAHC
Sbjct: 62  CGGTLITLKHVLTAAHC 78


>Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical
          protein F15B9.5 protein.
          Length = 297

 Score = 29.5 bits (63), Expect = 0.33
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +3

Query: 3  CGGSLISSKYVLTAAHCV 56
          CGG LI+   V+T+AHCV
Sbjct: 46 CGGVLIAPSIVITSAHCV 63


>U97408-1|AAB93344.2|  360|Caenorhabditis elegans Trypsin-like
           protease protein 6 protein.
          Length = 360

 Score = 27.9 bits (59), Expect = 1.0
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +3

Query: 3   CGGSLISSKYVLTAAHC 53
           C G+L S +++LTA HC
Sbjct: 75  CSGTLTSPRHILTATHC 91


>AF003134-1|AAB54144.1|  522|Caenorhabditis elegans Trypsin-like
           protease protein 7 protein.
          Length = 522

 Score = 27.5 bits (58), Expect = 1.3
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +3

Query: 3   CGGSLISSKYVLTAAHCVTG 62
           C G+++S +++L A HC  G
Sbjct: 193 CTGTIVSPRHILIATHCFAG 212


>U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like
           protease protein 2 protein.
          Length = 265

 Score = 27.1 bits (57), Expect = 1.8
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 3   CGGSLISSKYVLTAAHC 53
           CG S++   +++TAAHC
Sbjct: 54  CGASILDKTHLITAAHC 70


>AC084153-7|AAK84593.1|  451|Caenorhabditis elegans Hypothetical
           protein Y22D7AL.4 protein.
          Length = 451

 Score = 26.2 bits (55), Expect = 3.1
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -2

Query: 127 PLFVVLYSPKRTFFGVPSIKIAPVTQCAAVSTYFELM 17
           P   V++SP+ T FG P    AP     A + Y E +
Sbjct: 411 PYSKVVHSPRPTLFGFPFTGGAPKPSRQAFAAYMEAL 447


>U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like
           protease protein 3 protein.
          Length = 313

 Score = 25.8 bits (54), Expect = 4.1
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
 Frame = +3

Query: 3   CGGSLISSKYVLTAAHCV----TGAILIEGTPKNVR 98
           CG ++I   +++TAAHC     T + +    PKN R
Sbjct: 66  CGATVIDDFWLVTAAHCALQLQTRSFVYVREPKNNR 101


>AF078157-12|AAG24073.1|  338|Caenorhabditis elegans Hypothetical
           protein F25E5.2 protein.
          Length = 338

 Score = 25.8 bits (54), Expect = 4.1
 Identities = 13/52 (25%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
 Frame = -1

Query: 173 NNGMCTVLGTFHAVRTIVCCII--LS*THILRRSFNQDCSSDTVCSSEHVLR 24
           N  +C + G F  +   +CC +   S      ++ +QD   + +CS E   R
Sbjct: 109 NLAICEIKGNFPELNAAICCYLHNPSLFTAANKTISQDLVENGLCSKEDSFR 160


>Z68303-12|CAA92644.2|  969|Caenorhabditis elegans Hypothetical
           protein ZK792.1a protein.
          Length = 969

 Score = 25.4 bits (53), Expect = 5.4
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +3

Query: 51  CVTGAILIEGTPKNVRLGEY 110
           CV+G +  EG  +++RLG+Y
Sbjct: 158 CVSGMLTAEGALQHLRLGKY 177


>Z68303-1|CAC42387.1|  475|Caenorhabditis elegans Hypothetical
           protein ZK792.1b protein.
          Length = 475

 Score = 25.4 bits (53), Expect = 5.4
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +3

Query: 51  CVTGAILIEGTPKNVRLGEY 110
           CV+G +  EG  +++RLG+Y
Sbjct: 158 CVSGMLTAEGALQHLRLGKY 177


>Z68302-9|CAA92636.2|  969|Caenorhabditis elegans Hypothetical
           protein ZK792.1a protein.
          Length = 969

 Score = 25.4 bits (53), Expect = 5.4
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +3

Query: 51  CVTGAILIEGTPKNVRLGEY 110
           CV+G +  EG  +++RLG+Y
Sbjct: 158 CVSGMLTAEGALQHLRLGKY 177


>Z68219-8|CAD59155.1|  430|Caenorhabditis elegans Hypothetical
           protein T05A1.1a protein.
          Length = 430

 Score = 25.0 bits (52), Expect = 7.1
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = -2

Query: 163 CAQSWVPFMQSGPLFVVLYSPKRTFFGVPSIKIAPVTQCAAV 38
           CA + +  + S P+  +    K+ FF  P  K+ P+ Q A++
Sbjct: 112 CASNVLMCLTSLPITFITNVYKQWFFSSPVCKLIPLVQGASI 153


>Z68219-1|CAA92481.2|  387|Caenorhabditis elegans Hypothetical
           protein T05A1.1b protein.
          Length = 387

 Score = 25.0 bits (52), Expect = 7.1
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = -2

Query: 163 CAQSWVPFMQSGPLFVVLYSPKRTFFGVPSIKIAPVTQCAAV 38
           CA + +  + S P+  +    K+ FF  P  K+ P+ Q A++
Sbjct: 69  CASNVLMCLTSLPITFITNVYKQWFFSSPVCKLIPLVQGASI 110


>Z68216-7|CAD59147.1|  430|Caenorhabditis elegans Hypothetical
           protein T05A1.1a protein.
          Length = 430

 Score = 25.0 bits (52), Expect = 7.1
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = -2

Query: 163 CAQSWVPFMQSGPLFVVLYSPKRTFFGVPSIKIAPVTQCAAV 38
           CA + +  + S P+  +    K+ FF  P  K+ P+ Q A++
Sbjct: 112 CASNVLMCLTSLPITFITNVYKQWFFSSPVCKLIPLVQGASI 153


>AC024810-11|AAK68516.2|  165|Caenorhabditis elegans Hypothetical
           protein Y54E10A.17 protein.
          Length = 165

 Score = 25.0 bits (52), Expect = 7.1
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +3

Query: 54  VTGAILIEGTPKNVRLGEYNTTNNGPD 134
           V G + +E T KNV   E++    GPD
Sbjct: 37  VDGELTVEVTTKNVGNNEWSAVGFGPD 63


>Z92832-5|CAB07374.2|  292|Caenorhabditis elegans Hypothetical
          protein F31D4.6 protein.
          Length = 292

 Score = 24.6 bits (51), Expect = 9.4
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = +3

Query: 6  GGSLISSKYVLTAAH 50
          GGS+IS  +++TAAH
Sbjct: 43 GGSIISPYHIITAAH 57


>U97403-2|AAB52472.2|  649|Caenorhabditis elegans Hypothetical
           protein T10E9.4 protein.
          Length = 649

 Score = 24.6 bits (51), Expect = 9.4
 Identities = 11/49 (22%), Positives = 18/49 (36%)
 Frame = +3

Query: 18  ISSKYVLTAAHCVTGAILIEGTPKNVRLGEYNTTNNGPDCMKGTQDCAH 164
           ++S++     HC    +    T  +     Y+  NN   C K    C H
Sbjct: 295 VNSQFCKEDMHCQNAGVSANQTEYSHHCRSYSDPNNKVCCFKKKPKCKH 343


>AL132862-14|CAB60548.1|  541|Caenorhabditis elegans Hypothetical
           protein Y73F8A.20 protein.
          Length = 541

 Score = 24.6 bits (51), Expect = 9.4
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -2

Query: 172 TTGCAQSWVPFMQSGPLFVVLYSP 101
           TT C  +  P     P F ++YSP
Sbjct: 53  TTACLNTTCPIFSRSPQFNMIYSP 76


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,888,756
Number of Sequences: 27780
Number of extensions: 86141
Number of successful extensions: 284
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 284
length of database: 12,740,198
effective HSP length: 42
effective length of database: 11,573,438
effective search space used: 219895322
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)