Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_K19
         (566 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49909-4|CAA90108.1|  876|Caenorhabditis elegans Hypothetical pr...    30   1.0  
U28928-1|AAA68334.3|  589|Caenorhabditis elegans Anchor cell fus...    30   1.0  
EF205023-1|ABP04049.1|  589|Caenorhabditis elegans anchor cell f...    30   1.0  
AY303577-1|AAP57299.1|  876|Caenorhabditis elegans cell death-re...    30   1.0  
AL132860-13|CAB60509.1|  292|Caenorhabditis elegans Hypothetical...    30   1.0  
Z68882-3|CAA93106.2|  568|Caenorhabditis elegans Hypothetical pr...    29   2.3  
U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily ass...    29   2.3  
AL117204-16|CAB55130.1|  389|Caenorhabditis elegans Hypothetical...    29   3.1  
AF025463-7|AAB71007.1| 1210|Caenorhabditis elegans Hypothetical ...    28   5.4  
AC087081-18|AAK66030.1|  124|Caenorhabditis elegans Hypothetical...    28   5.4  
Z81511-1|CAB04166.1|  192|Caenorhabditis elegans Hypothetical pr...    27   9.4  
U53146-1|AAA96111.1|  348|Caenorhabditis elegans Hypothetical pr...    27   9.4  
AL032635-3|CAB63374.1|  635|Caenorhabditis elegans Hypothetical ...    27   9.4  
AC024696-1|AAK84516.1|  348|Caenorhabditis elegans Hypothetical ...    27   9.4  

>Z49909-4|CAA90108.1|  876|Caenorhabditis elegans Hypothetical
           protein C14A4.4a protein.
          Length = 876

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 19/92 (20%), Positives = 45/92 (48%)
 Frame = +2

Query: 38  YPQEKLHFVGVKINDVVVEKLVTFFDYSQFDATNSVFLTKKEIKTSYPHNFKVRQPRLNH 217
           YP+  L ++ ++  DVV++K     D+      N++    +E      +++ + + +L  
Sbjct: 388 YPKFSLAYLTLRFADVVLDKQYQLADWRARPLRNAMINYAREDTHYLLYSYDMLREQLLK 447

Query: 218 KPFSVTIDVXSDIATDAVIKIFLGPKYNDXGF 313
           +      +V S+ ++D  IK++  P +N  G+
Sbjct: 448 QDTKDLANVYSE-SSDLCIKVYKKPVFNPKGY 478


>U28928-1|AAA68334.3|  589|Caenorhabditis elegans Anchor cell fusion
           failure protein1 protein.
          Length = 589

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -3

Query: 558 IHLQYLLATINLFGMHSKPSDIYNGTFPSSNNFMRSVNGKESS 430
           +H+     T N     ++ +D YN    S NNF+RSV   ESS
Sbjct: 316 VHMDQFSGTKNFVLRGTQYNDTYNERRVSDNNFVRSVKVDESS 358


>EF205023-1|ABP04049.1|  589|Caenorhabditis elegans anchor cell
           fusion failure-1 protein.
          Length = 589

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -3

Query: 558 IHLQYLLATINLFGMHSKPSDIYNGTFPSSNNFMRSVNGKESS 430
           +H+     T N     ++ +D YN    S NNF+RSV   ESS
Sbjct: 316 VHMDQFSGTKNFVLRGTQYNDTYNERRVSDNNFVRSVKVDESS 358


>AY303577-1|AAP57299.1|  876|Caenorhabditis elegans cell
           death-related nuclease 3 protein.
          Length = 876

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 19/92 (20%), Positives = 45/92 (48%)
 Frame = +2

Query: 38  YPQEKLHFVGVKINDVVVEKLVTFFDYSQFDATNSVFLTKKEIKTSYPHNFKVRQPRLNH 217
           YP+  L ++ ++  DVV++K     D+      N++    +E      +++ + + +L  
Sbjct: 388 YPKFSLAYLTLRFADVVLDKQYQLADWRARPLRNAMINYAREDTHYLLYSYDMLREQLLK 447

Query: 218 KPFSVTIDVXSDIATDAVIKIFLGPKYNDXGF 313
           +      +V S+ ++D  IK++  P +N  G+
Sbjct: 448 QDTKDLANVYSE-SSDLCIKVYKKPVFNPKGY 478


>AL132860-13|CAB60509.1|  292|Caenorhabditis elegans Hypothetical
           protein Y56A3A.15 protein.
          Length = 292

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 25/83 (30%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
 Frame = +2

Query: 218 KPFSVTIDVXSDIATDAVIKIFLGPKYNDXGF---PITLEENWHKFYELDWFTHKITPGQ 388
           K F V I   S+I +  ++++F  P  ++ G    PI  +   H FY L++F  K+T   
Sbjct: 143 KTFGVKI-ASSEIQSSHLLELF--PSLSNLGVYNVPINTQILTHNFYWLEFFKTKVTL-D 198

Query: 389 NKIVRNSNEFSLFKEDSLPLTDL 457
           + +V N ++FS+ + ++LP  +L
Sbjct: 199 DILVSNCSKFSI-EYNNLPDKEL 220


>Z68882-3|CAA93106.2|  568|Caenorhabditis elegans Hypothetical
           protein C47E12.3 protein.
          Length = 568

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 15/49 (30%), Positives = 27/49 (55%)
 Frame = -3

Query: 564 MDIHLQYLLATINLFGMHSKPSDIYNGTFPSSNNFMRSVNGKESSLKSE 418
           +D   +Y+L +  LFG + +  D+YN +F     +MR    + SSL+ +
Sbjct: 286 IDSFYEYMLKSYILFG-NQRDLDMYNESFARITTYMRRGRSRCSSLEGD 333


>U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 59 protein.
          Length = 1592

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 13/50 (26%), Positives = 25/50 (50%)
 Frame = -2

Query: 205 WLTNLEVVWVTSLNLFFGQEYTVSGIKLAIVKECD*FLNDNIIDFNADEM 56
           W+TNL   +    NL+F  +Y + G  L ++ +    + +++  F   EM
Sbjct: 142 WITNLHYAFQDEKNLYFVMDYYIGGDMLTLLSKFVDHIPESMAKFYIAEM 191


>AL117204-16|CAB55130.1|  389|Caenorhabditis elegans Hypothetical
           protein Y116A8C.25 protein.
          Length = 389

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 12/48 (25%), Positives = 25/48 (52%)
 Frame = +2

Query: 326 EENWHKFYELDWFTHKITPGQNKIVRNSNEFSLFKEDSLPLTDLMKLL 469
           E +W + +E  +  H++ P  ++++   N+  LF+   +  T   KLL
Sbjct: 150 ENDWTETWEEFFIRHRLKPQIDRLIETHNDRQLFELSEILYTKTAKLL 197


>AF025463-7|AAB71007.1| 1210|Caenorhabditis elegans Hypothetical
           protein K10B4.1 protein.
          Length = 1210

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 22/94 (23%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
 Frame = +2

Query: 254 IATDAVIKIFLGPKYNDXGFPITLEENWHKFYELDWFTHKITPGQNKIVRNSNEFSLF-- 427
           IA + V    LGP +   G  + L+    KF +  W+T+K+T  Q + V+ ++  ++   
Sbjct: 452 IAENPVYGSLLGPTF---GCIMALQFQKTKFGDTYWYTNKLTEDQLEEVKKTSISAMMCR 508

Query: 428 -KEDSLPLTDLMKLLDE-GKVPLYMSEGFECMPN 523
            ++ S+   D+ K  D    +P++ +      P+
Sbjct: 509 HQKTSIIQKDVFKAADNFQNIPIFCNSSVFAKPD 542


>AC087081-18|AAK66030.1|  124|Caenorhabditis elegans Hypothetical
           protein Y82E9BL.1 protein.
          Length = 124

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = -2

Query: 385 PRSYLVREPIQFVEFMPVFFQCDGESXIVV 296
           P+S L+R+PIQ V+   V   CDGE+ + +
Sbjct: 93  PQS-LLRKPIQIVDDCSVKMYCDGEAKLFI 121


>Z81511-1|CAB04166.1|  192|Caenorhabditis elegans Hypothetical
           protein F21F12.1 protein.
          Length = 192

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
 Frame = -3

Query: 564 MDIHLQYLLAT--INLFGMHSKPSDIYNGTFPSSNN 463
           MD+ L+ LL +   +LFG+H+ P+   N   P  NN
Sbjct: 65  MDLKLRELLLSSPAHLFGLHTIPASGSNSQQPDDNN 100


>U53146-1|AAA96111.1|  348|Caenorhabditis elegans Hypothetical
           protein ZC411.1 protein.
          Length = 348

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -3

Query: 531 INLFGMHSKPSDIYNGTFPSSNNFMRSVNG 442
           INL      P  ++ GT+  + NF++ V G
Sbjct: 235 INLLTGQKPPETVFQGTYVETRNFLKIVRG 264


>AL032635-3|CAB63374.1|  635|Caenorhabditis elegans Hypothetical
           protein Y51A2A.5 protein.
          Length = 635

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 20/81 (24%), Positives = 35/81 (43%), Gaps = 5/81 (6%)
 Frame = +2

Query: 239 DVXSDIATDAVIKIFLGPKYNDXGFPITLEENWHKFYELDWFTHK-----ITPGQNKIVR 403
           +V +D+ TD+ I I   P+  D     T E+      E+D    K     + P QN    
Sbjct: 360 EVLNDLVTDSNIIISRFPEDEDVKDKRTFEDKDESISEMDTVDQKAKDVNLGPPQNSNKH 419

Query: 404 NSNEFSLFKEDSLPLTDLMKL 466
            S +F  F+  ++ + D  ++
Sbjct: 420 CSKDFHSFESSTIRIDDFSEI 440


>AC024696-1|AAK84516.1|  348|Caenorhabditis elegans Hypothetical
           protein F07B7.7 protein.
          Length = 348

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -3

Query: 531 INLFGMHSKPSDIYNGTFPSSNNFMRSVNG 442
           INL      P  ++ GT+  + NF++ V G
Sbjct: 235 INLLTGQKPPETVFQGTYVETRNFLKIVRG 264


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,318,032
Number of Sequences: 27780
Number of extensions: 245076
Number of successful extensions: 670
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 670
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)