Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_K18
(672 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16H5.02 |pfk1||6-phosphofructokinase |Schizosaccharomyces po... 27 1.9
SPBC1347.01c |rev1|SPBC215.16c|deoxycytidyl transferase Rev1 |Sc... 27 1.9
SPBC543.07 |pek1|skh1, mkk1|MAP kinase kinase Pek1 |Schizosaccha... 27 2.5
SPBC31A8.01c |cwl1|rtn1, SPBC651.13c|reticulon-like protein|Schi... 27 3.3
SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3 |Schizosacc... 27 3.3
SPAC9.02c |||N-acetyltransferase|Schizosaccharomyces pombe|chr 1... 26 5.7
SPCC1494.07 |||conserved eukaryotic protein|Schizosaccharomyces ... 25 7.5
SPAC17G8.12 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 7.5
SPAC11D3.13 |||ThiJ domain protein|Schizosaccharomyces pombe|chr... 25 7.5
SPAC17H9.06c |||conserved fungal protein|Schizosaccharomyces pom... 25 9.9
SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces ... 25 9.9
>SPBC16H5.02 |pfk1||6-phosphofructokinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 942
Score = 27.5 bits (58), Expect = 1.9
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +1
Query: 520 LGAVPRGAVPARADRVLRDLQG 585
LG V RG +P DR+L LQG
Sbjct: 476 LGHVQRGGIPCAYDRMLATLQG 497
>SPBC1347.01c |rev1|SPBC215.16c|deoxycytidyl transferase Rev1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 935
Score = 27.5 bits (58), Expect = 1.9
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -1
Query: 468 VSLKFVHTLRLESVSYGHSLMQLQIAS 388
VS +F H LRL+ V+ H + +IAS
Sbjct: 291 VSTRFSHELRLKPVAVAHGIKNSEIAS 317
>SPBC543.07 |pek1|skh1, mkk1|MAP kinase kinase Pek1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 363
Score = 27.1 bits (57), Expect = 2.5
Identities = 30/148 (20%), Positives = 56/148 (37%), Gaps = 1/148 (0%)
Frame = +2
Query: 167 SAGLPRGDISESEHLEN-GMAESLDERRFQEAERARVSEILNESRDAPDNEINLDDPCMK 343
S G IS E +N G+ E D E++ + E + P LDD +
Sbjct: 12 SNGFSEEYISHPERNDNQGIVEITDLVFSSESKLTQRKESRDSKTFVPSFLEELDDDHLH 71
Query: 344 VHCSAGRVCEINEHGEAICNCIKECPYETDSRRKVCTNFNETWSSDCEVYRQRCLCLEHS 523
+ G + +N GE + +++C + + + + + +Q L
Sbjct: 72 ELVTNGGILYMNSLGEGVSGSVRKC--RIRGTQMIFAMKTVLAAPNTALQKQ---LLREL 126
Query: 524 ELCREAQYQHVQIEYYGTCREMPECSEN 607
++ R ++ ++YYG C EC N
Sbjct: 127 KINRSCTSPYI-VKYYGACYNNAECQLN 153
>SPBC31A8.01c |cwl1|rtn1, SPBC651.13c|reticulon-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 308
Score = 26.6 bits (56), Expect = 3.3
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = -2
Query: 296 VTHSGSRRHELSQP-PGIVSRPGSPPCRSRGAPTRRCP 186
++ S S H SQ PG S P P + G ++CP
Sbjct: 66 ISSSSSEPHHTSQSTPGETSSPVCPVSGAHGGADKKCP 103
>SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 732
Score = 26.6 bits (56), Expect = 3.3
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +1
Query: 19 HRYRQRDQDKESRRCRPLMDTDI*--HGRHRGPKTSSTPS 132
H + QR+ +E+RR P D GR+R +TSSTPS
Sbjct: 332 HNFTQREL-REARRIIPQFSYDPPGASGRNRRERTSSTPS 370
>SPAC9.02c |||N-acetyltransferase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 165
Score = 25.8 bits (54), Expect = 5.7
Identities = 18/70 (25%), Positives = 27/70 (38%)
Frame = +2
Query: 188 DISESEHLENGMAESLDERRFQEAERARVSEILNESRDAPDNEINLDDPCMKVHCSAGRV 367
+I E E L+ F EAERA + I + + AP+ ++ L P G V
Sbjct: 3 NIRNIERSEVEEVSKLEAICFPEAERASFARIKDRVKRAPEIQLGLFAPTQHTSTLIGHV 62
Query: 368 CEINEHGEAI 397
E +
Sbjct: 63 LTSRTGSETV 72
>SPCC1494.07 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1502
Score = 25.4 bits (53), Expect = 7.5
Identities = 7/23 (30%), Positives = 13/23 (56%)
Frame = +2
Query: 350 CSAGRVCEINEHGEAICNCIKEC 418
C+A R+C++ E C+ +C
Sbjct: 974 CTASRICKVREIASLSLTCLLDC 996
>SPAC17G8.12 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 608
Score = 25.4 bits (53), Expect = 7.5
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -2
Query: 593 PAFPCKSRSTRSARAGTAPRGTAPSARGRGSAVGT 489
P+ P ++TR +A + GT+ S RG+ S G+
Sbjct: 307 PSKPSLRKTTRREQAPSFNSGTSSSERGKNSISGS 341
>SPAC11D3.13 |||ThiJ domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 222
Score = 25.4 bits (53), Expect = 7.5
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +2
Query: 320 NLDDPCMKVHCSAGRVCEINEHGEAICNCIKECPYETDSRRKVCTNFNE 466
NL K++ G + + HG I CIK+ + + K T FNE
Sbjct: 105 NLHKGAAKIYSMGGVIAAVC-HGPVILPCIKDSTGFSIVKGKTVTAFNE 152
>SPAC17H9.06c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 601
Score = 25.0 bits (52), Expect = 9.9
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = -1
Query: 333 GSSRLISLSGASRDSFRISETRALSAS 253
G+ +L +SRD+FR ++T+A S+S
Sbjct: 47 GNKKLKESQFSSRDNFRTTQTQASSSS 73
>SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 528
Score = 25.0 bits (52), Expect = 9.9
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +3
Query: 351 AAPAVSVRSTSTGKLSATASRSVHTKPTLGARCAQTSTRPG 473
++P+ + STST S+ S + T+PT G Q + G
Sbjct: 464 SSPSGTNSSTSTSSTSSKHSTGISTEPTTGEENKQDGSVGG 504
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,416,550
Number of Sequences: 5004
Number of extensions: 45765
Number of successful extensions: 165
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 165
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 307866294
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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