Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_K18
         (672 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              49   4e-08
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   2.6  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    22   4.6  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    22   4.6  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    22   4.6  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    22   4.6  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   6.1  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   8.1  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 49.2 bits (112), Expect = 4e-08
 Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
 Frame = +2

Query: 329 DPCMKVHCSAGRVCEINEHGE-AICNCIKECPYETDSRRKVCTNFNETWSSDCEVYRQRC 505
           DPC   +C  G+ CE++ +   A+C C+++CP      R VC +  + +++ CE++R  C
Sbjct: 80  DPCASKYCGIGKECELSPNSTIAVCVCMRKCPRR---HRPVCASNGKIYANHCELHRAAC 136


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = +1

Query: 112 KTSSTPSALTYDDYGAADVGGASP--RGHLRVGAPRERHGGEPGRETI 249
           +T+S+PS         +    +SP  +G    G P +R+GGE  ++ +
Sbjct: 506 ETNSSPSPNPRIASAPSSSTSSSPPAKGAAAAGQPSKRNGGETNKQEL 553



 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 672 LGQFAHYVNSQSRMRRGKSDISFS 601
           LG  A  ++   R RRG +D+S +
Sbjct: 11  LGSIARSLSLDRRARRGAADLSLA 34


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -3

Query: 55  CFLYLDLFVYICVS 14
           CF+Y  L  ++CV+
Sbjct: 372 CFIYASLLEFVCVN 385


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -3

Query: 55  CFLYLDLFVYICVS 14
           CF+Y  L  ++CV+
Sbjct: 341 CFIYASLLEFVCVN 354


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -3

Query: 55  CFLYLDLFVYICVS 14
           CF+Y  L  ++CV+
Sbjct: 392 CFIYASLLEFVCVN 405


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -3

Query: 55  CFLYLDLFVYICVS 14
           CF+Y  L  ++CV+
Sbjct: 341 CFIYASLLEFVCVN 354


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -2

Query: 506 GSAVGTPRSPMTRSR*SL 453
           GS  G+PRSP + SR S+
Sbjct: 317 GSNNGSPRSPESNSRCSV 334


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 49  LYLDLFVYICVSL 11
           LYL  FV +C+S+
Sbjct: 122 LYLSSFVLVCISM 134


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,997
Number of Sequences: 438
Number of extensions: 3727
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20343105
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)