Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_K16
         (620 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK096821-1|BAC04869.1|  405|Homo sapiens protein ( Homo sapiens ...    30   5.7  
AC023270-2|AAX88845.1|  405|Homo sapiens unknown protein.              30   5.7  
AY014404-1|AAG38891.1| 1770|Homo sapiens kinesin-like protein RB...    30   7.6  
AY014403-1|AAG38890.1| 1805|Homo sapiens kinesin-like protein RB...    30   7.6  

>AK096821-1|BAC04869.1|  405|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39502 fis, clone PROST2017098. ).
          Length = 405

 Score = 30.3 bits (65), Expect = 5.7
 Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
 Frame = -3

Query: 333 HSHFAVFTVCSTSAKDFISTAANRASEFLSDSCLIEINGTLVLP-SQVQWTSLTLVTVNQ 157
           HS F +  VC   A  +++ A N +S  LS + ++ + G   LP ++V W +L +V V+ 
Sbjct: 339 HSVF-IPKVCKADAGLYVARAQN-SSGALSSNVILHVTGNCRLPITRVNWITLCVVYVSV 396

Query: 156 S 154
           S
Sbjct: 397 S 397


>AC023270-2|AAX88845.1|  405|Homo sapiens unknown protein.
          Length = 405

 Score = 30.3 bits (65), Expect = 5.7
 Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
 Frame = -3

Query: 333 HSHFAVFTVCSTSAKDFISTAANRASEFLSDSCLIEINGTLVLP-SQVQWTSLTLVTVNQ 157
           HS F +  VC   A  +++ A N +S  LS + ++ + G   LP ++V W +L +V V+ 
Sbjct: 339 HSVF-IPKVCKADAGLYVARAQN-SSGALSSNVILHVTGNCRLPITRVNWITLCVVYVSV 396

Query: 156 S 154
           S
Sbjct: 397 S 397


>AY014404-1|AAG38891.1| 1770|Homo sapiens kinesin-like protein RBKIN2
            protein.
          Length = 1770

 Score = 29.9 bits (64), Expect = 7.6
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = -3

Query: 339  SPHSHFAVFTVCSTSAKDFISTAANRASEFLSDSCL-IEING 217
            SP S  A +TV  +  KD++        EF+SD  L IE+ G
Sbjct: 914  SPQSKDAQYTVAFSHCKDYVVNVTEEFLEFISDGALAIEVWG 955


>AY014403-1|AAG38890.1| 1805|Homo sapiens kinesin-like protein RBKIN1
            protein.
          Length = 1805

 Score = 29.9 bits (64), Expect = 7.6
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = -3

Query: 339  SPHSHFAVFTVCSTSAKDFISTAANRASEFLSDSCL-IEING 217
            SP S  A +TV  +  KD++        EF+SD  L IE+ G
Sbjct: 914  SPQSKDAQYTVAFSHCKDYVVNVTEEFLEFISDGALAIEVWG 955


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,810,683
Number of Sequences: 237096
Number of extensions: 1701991
Number of successful extensions: 3521
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3521
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6691573490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)