Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_K13
         (674 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    24   1.2  
DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              24   1.5  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   2.7  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   3.5  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   4.7  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   4.7  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   8.1  

>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +3

Query: 462 NGGCSSFLDICCPVS 506
           +GGCSS +D+  PV+
Sbjct: 925 DGGCSSLVDVSTPVN 939


>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +3

Query: 606 KTTVEKDGETKFGEFP 653
           KTT+E    T++GEFP
Sbjct: 48  KTTIEDVEATEYGEFP 63


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 54  NDIDLEEINSIFKIPNQA 107
           ND+DLE+   I   P+QA
Sbjct: 306 NDLDLEKYEGISSTPSQA 323


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 93  IPNQAPTTTKKPTMTVSAPSA 155
           +P+++PT T  PTM   A +A
Sbjct: 595 VPSKSPTLTHSPTMYGDALNA 615


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 13/52 (25%), Positives = 19/52 (36%)
 Frame = +3

Query: 435  TDNVDISGPNGGCSSFLDICCPVSDQRPPTDPITLKPEPETPMRVGCGWANP 590
            T  V   GP G      ++      QRP   PI L+    +   +   W+ P
Sbjct: 979  TIRVIAEGPAGRSVPSAELIVRTEPQRPAGPPINLEARALSSSEILITWSPP 1030


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 13/52 (25%), Positives = 19/52 (36%)
 Frame = +3

Query: 435  TDNVDISGPNGGCSSFLDICCPVSDQRPPTDPITLKPEPETPMRVGCGWANP 590
            T  V   GP G      ++      QRP   PI L+    +   +   W+ P
Sbjct: 975  TIRVIAEGPAGRSVPSAELIVRTEPQRPAGPPINLEARALSSSEILITWSPP 1026


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -2

Query: 610 VLIPTPSGFAQPHPTRIGVSGSGF 539
           +L PT   FAQ    R+     GF
Sbjct: 682 ILEPTDKAFAQGSDARVECKADGF 705


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,102
Number of Sequences: 438
Number of extensions: 4969
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20464920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)