Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_K10
         (189 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M29489-1|AAA27724.1|  109|Apis mellifera protein ( Bee homeobox-...    19   5.4  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    19   5.4  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    18   9.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    18   9.5  

>M29489-1|AAA27724.1|  109|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone E60. ).
          Length = 109

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +3

Query: 84  RTRAISSDEGRGPHG 128
           RTR +   +GRG  G
Sbjct: 2   RTRRVKRSDGRGNGG 16


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = -3

Query: 115 RPSSLDIARVRRRNNDESLRSLIRVSQVYP 26
           RPS  +    +   ++ SLR L +V++  P
Sbjct: 403 RPSRRNSCESQMMGDEMSLRELTQVTEEKP 432


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 35  LRNSNERTERFIVIPAA 85
           + N+N+RTE    + AA
Sbjct: 384 MSNNNQRTEWSATVKAA 400


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 35  LRNSNERTERFIVIPAA 85
           + N+N+RTE    + AA
Sbjct: 422 MSNNNQRTEWSATVKAA 438


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,383
Number of Sequences: 438
Number of extensions: 557
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 42
effective length of database: 127,947
effective search space used:  2558940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)