Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_K05
(412 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_06_0044 - 25150322-25151260 57 6e-09
01_01_1152 + 9170628-9171899 49 1e-06
01_06_0824 - 32243495-32244319,32244449-32244859 46 9e-06
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 45 3e-05
11_01_0771 + 6453130-6454488 42 3e-04
11_01_0767 + 6438648-6438809,6439146-6440000 40 6e-04
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 40 8e-04
04_04_0619 + 26652923-26653267,26653440-26654273 40 0.001
04_04_0620 + 26656072-26656417,26656585-26657396 38 0.002
11_02_0012 - 7346282-7347136,7347234-7347593 38 0.004
11_02_0011 - 7337618-7338496,7338596-7338991 38 0.004
11_01_0750 - 6315126-6315896,6316371-6316784 33 0.12
08_02_1243 - 25527523-25527960,25527993-25528604 32 0.16
05_04_0023 + 17233658-17233973,17234101-17234181,17234275-17234366 27 4.4
02_05_0795 - 31792231-31794780 27 5.8
09_01_0155 - 2301903-2302151,2302334-2302491,2302651-2302819,230... 27 7.7
08_01_0874 + 8575718-8576422,8576603-8576662,8576799-8576945,857... 27 7.7
05_06_0105 + 25607374-25607673,25608319-25608377,25608761-256089... 27 7.7
04_01_0046 + 510721-510790,511048-511121,511459-511729,511865-51... 27 7.7
02_05_0467 - 29278795-29278903,29281467-29281585,29281754-292818... 27 7.7
>05_06_0044 - 25150322-25151260
Length = 312
Score = 56.8 bits (131), Expect = 6e-09
Identities = 28/70 (40%), Positives = 43/70 (61%)
Frame = -3
Query: 386 LSHVLQTCGIEVNEVGSIAYAATQVGIVNKFGEDSDVLYEVVADRPFMFFIQDEVTRQLL 207
+S +L C + VNE G++A A T VG + F D + + VAD PF+FFI +EV+ ++
Sbjct: 243 VSSLLHQCFVNVNEEGTVAAAGT-VGEIMGFAMPDDQIVDFVADHPFLFFIVEEVSGLVV 301
Query: 206 FTGRVSEPAI 177
F G+V P +
Sbjct: 302 FAGQVVNPLL 311
>01_01_1152 + 9170628-9171899
Length = 423
Score = 49.2 bits (112), Expect = 1e-06
Identities = 27/72 (37%), Positives = 43/72 (59%)
Frame = -3
Query: 398 EALRLSHVLQTCGIEVNEVGSIAYAATQVGIVNKFGEDSDVLYEVVADRPFMFFIQDEVT 219
+ L ++ V IEV+E+G++A A+T V ++ K V + VADRPF+F + +E+T
Sbjct: 351 DGLFIAEVYHQATIEVDELGTVAAASTAVVMMQKGSSLPPV--DFVADRPFLFAVVEELT 408
Query: 218 RQLLFTGRVSEP 183
+LF G V P
Sbjct: 409 GAVLFLGHVVNP 420
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 46.4 bits (105), Expect = 9e-06
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Frame = -3
Query: 398 EALRLSHVLQTCGIEVNEVGSIAYAATQVGIVNKFGEDSDVLYEV--VADRPFMFFIQDE 225
E + +S V +EVNE G+ A AAT V + S ++ V VAD PFMF I+++
Sbjct: 334 EKIVVSAVYHESFVEVNEEGTEAAAATAVVMTLGCAAPSAPVHVVDFVADHPFMFLIKED 393
Query: 224 VTRQLLFTGRVSEPA 180
+T ++F G+V+ P+
Sbjct: 394 LTGVVVFAGQVTNPS 408
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 44.8 bits (101), Expect = 3e-05
Identities = 26/68 (38%), Positives = 39/68 (57%)
Frame = -3
Query: 392 LRLSHVLQTCGIEVNEVGSIAYAATQVGIVNKFGEDSDVLYEVVADRPFMFFIQDEVTRQ 213
L +S V +EVNE G+ A AAT I + + + + VAD PF+F IQ+++T
Sbjct: 398 LFVSSVFHKSFVEVNEEGTEAAAATAAVITLR---SAPIAEDFVADHPFLFLIQEDMTGV 454
Query: 212 LLFTGRVS 189
+LF G V+
Sbjct: 455 VLFVGHVA 462
Score = 43.2 bits (97), Expect = 8e-05
Identities = 28/72 (38%), Positives = 38/72 (52%)
Frame = -3
Query: 392 LRLSHVLQTCGIEVNEVGSIAYAATQVGIVNKFGEDSDVLYEVVADRPFMFFIQDEVTRQ 213
L +S V IEVNE G+ A AA V + + + VAD PFMF I+++VT
Sbjct: 650 LFVSSVFHKSFIEVNEEGTEATAAVMVSMEHSRPRRLNF----VADHPFMFLIREDVTGV 705
Query: 212 LLFTGRVSEPAI 177
+LF G V P +
Sbjct: 706 ILFIGHVVNPLL 717
>11_01_0771 + 6453130-6454488
Length = 452
Score = 41.5 bits (93), Expect = 3e-04
Identities = 21/61 (34%), Positives = 37/61 (60%)
Frame = -3
Query: 359 IEVNEVGSIAYAATQVGIVNKFGEDSDVLYEVVADRPFMFFIQDEVTRQLLFTGRVSEPA 180
IEVNE G++A AAT ++ V + VA+ PF +FI +E++ ++F G + +P+
Sbjct: 393 IEVNEEGTVAAAATMTRMLPSGVPPPPV--DFVAEHPFAYFIVEEMSSAVVFAGHIVDPS 450
Query: 179 I 177
+
Sbjct: 451 M 451
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 40.3 bits (90), Expect = 6e-04
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Frame = -3
Query: 395 ALRLSHVLQTCGIEVNEVGSIAYAATQVGI----VNKFGED---SDVLYEVVADRPFMFF 237
A+ +S V+ +EVNE GS A A T+ + + +D L + VAD PF FF
Sbjct: 257 AMFVSSVIHKVVVEVNEEGSEAAAYTEESDDDLGCSLYDDDYTPPPKLVDFVADHPFAFF 316
Query: 236 IQDEVTRQLLFTGRVSEPA 180
I +E ++ ++F G V +P+
Sbjct: 317 IVEERSQAIVFAGHVLDPS 335
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 39.9 bits (89), Expect = 8e-04
Identities = 25/75 (33%), Positives = 41/75 (54%)
Frame = -3
Query: 401 REALRLSHVLQTCGIEVNEVGSIAYAATQVGIVNKFGEDSDVLYEVVADRPFMFFIQDEV 222
R L +S + ++V+E G+ A AA+ V F + V + VAD PF+F I++++
Sbjct: 187 RHNLFVSSLFHKSFVQVDEEGTEAAAASAA--VVSF-RSAPVTVDFVADHPFLFLIREDM 243
Query: 221 TRQLLFTGRVSEPAI 177
T +LF G V P +
Sbjct: 244 TGVVLFIGHVVNPLL 258
>04_04_0619 + 26652923-26653267,26653440-26654273
Length = 392
Score = 39.5 bits (88), Expect = 0.001
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Frame = -3
Query: 398 EALRLSHVLQTCGIEVNEVGSIAYAATQVGIVNKF-GEDSDV--LYEVVADRPFMFFIQD 228
E L +S + Q C +EV+E G+ A AT + G +S VA+ PFMF I +
Sbjct: 314 ERLYVSAMRQKCAVEVDEEGTTAVEATYSCCSPTYSGPESPKPRPMSFVAEHPFMFAIVE 373
Query: 227 EVTRQLLFTGRVSEPA 180
Q+LF G V +P+
Sbjct: 374 YEKAQVLFLGHVMDPS 389
>04_04_0620 + 26656072-26656417,26656585-26657396
Length = 385
Score = 38.3 bits (85), Expect = 0.002
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Frame = -3
Query: 392 LRLSHVLQTCGIEVNEVGSIA----YAATQVGIVNKFGEDSDVLYEVVADRPFMFFIQDE 225
L +S + Q C +EV+E G+ A Y+ + G + VA+ PFMF I +
Sbjct: 307 LYVSTMRQKCAVEVDEEGTTAVEAMYSPSSPGYSPGYQPPRPPPMSFVAEHPFMFAIVEY 366
Query: 224 VTRQLLFTGRVSEPA 180
Q+LF G V +P+
Sbjct: 367 KKAQVLFLGHVMDPS 381
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 37.5 bits (83), Expect = 0.004
Identities = 24/72 (33%), Positives = 38/72 (52%)
Frame = -3
Query: 398 EALRLSHVLQTCGIEVNEVGSIAYAATQVGIVNKFGEDSDVLYEVVADRPFMFFIQDEVT 219
E + + V+ +EVNE G+ A AAT + + + + VAD PF FF+ +E +
Sbjct: 330 ELVVVEKVMHRAVVEVNEEGTEAAAATACTMKFLCLTLTSPV-DFVADHPFAFFVVEEKS 388
Query: 218 RQLLFTGRVSEP 183
+LF G V +P
Sbjct: 389 DAVLFAGHVLDP 400
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 37.5 bits (83), Expect = 0.004
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = -3
Query: 392 LRLSHVLQTCGIEVNEVGSIAYAATQVGI-VNKFGEDSDVLYEVVADRPFMFFIQDEVTR 216
L + V +EVNE G+ A A+T I + D VAD PF FF+ +E +
Sbjct: 353 LVVEEVFHRAVVEVNEEGTEAAASTACTIRLLSMSYPEDF----VADHPFAFFVVEETSG 408
Query: 215 QLLFTGRVSEP 183
+LF G V +P
Sbjct: 409 AVLFAGHVLDP 419
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 32.7 bits (71), Expect = 0.12
Identities = 23/71 (32%), Positives = 38/71 (53%)
Frame = -3
Query: 392 LRLSHVLQTCGIEVNEVGSIAYAATQVGIVNKFGEDSDVLYEVVADRPFMFFIQDEVTRQ 213
L LS VL +EV++ G I + +G+ G+ + AD PF F I++EV+
Sbjct: 327 LFLSDVLHKAVLEVDQKG-IEETSVSMGL----GKPLPAQH-FKADHPFFFMIREEVSGT 380
Query: 212 LLFTGRVSEPA 180
++F G V +P+
Sbjct: 381 VIFMGHVLDPS 391
>08_02_1243 - 25527523-25527960,25527993-25528604
Length = 349
Score = 32.3 bits (70), Expect = 0.16
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Frame = -1
Query: 301 ISLEKIPTSSTRWWPIDRSCSSSRTKS---PGNCCSPGVSPNPQSSGQ--LVNSKKKQI* 137
+SL + T S+R P CSS T+S PG+ CSP SP ++G L+ +
Sbjct: 82 VSLPRWCTPSSRGAPT--MCSSPPTQSAAPPGSRCSPSPSPTAAAAGDHPLLTQSPHDLV 139
Query: 136 PVHNLQFHNI 107
P + FH++
Sbjct: 140 PFIEVPFHHL 149
>05_04_0023 + 17233658-17233973,17234101-17234181,17234275-17234366
Length = 162
Score = 27.5 bits (58), Expect = 4.4
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -3
Query: 389 RLSHVLQTCGIEVNEVGSIAYAATQVGIVNKFGEDS 282
++ HV QTC + GSI ++A + + ++G+ S
Sbjct: 40 KICHVKQTCAVTKQLYGSILFSAVKRADIIQYGKTS 75
>02_05_0795 - 31792231-31794780
Length = 849
Score = 27.1 bits (57), Expect = 5.8
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
Frame = -3
Query: 341 GSIAYAATQVGIVNKFGEDSDVLYEVVADRPFMFFIQDEVTRQ-------LLFTGRVSEP 183
GS +Y A + G+D D+L E V DR +FF + R+ L +G
Sbjct: 658 GSYSYVA-----IGSSGDDYDILAESVCDR--VFFAGEATNRRYPATMHGALLSGYREAA 710
Query: 182 AIVGAARKL*KKTD 141
IV AAR+ KK D
Sbjct: 711 NIVRAARRRAKKVD 724
>09_01_0155 -
2301903-2302151,2302334-2302491,2302651-2302819,
2303796-2304839,2305792-2306075,2306318-2307333,
2307937-2308085
Length = 1022
Score = 26.6 bits (56), Expect = 7.7
Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +1
Query: 340 PTSLTSMPHVC-RTCDNLSASRTSC 411
PT+L+ VC RTCDN TSC
Sbjct: 408 PTTLSPGDMVCIRTCDNRGEITTSC 432
>08_01_0874 +
8575718-8576422,8576603-8576662,8576799-8576945,
8577390-8577527
Length = 349
Score = 26.6 bits (56), Expect = 7.7
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -1
Query: 280 TSSTRWWPIDRSCSSSRTKSPGNCCSPGVSPNPQSSGQ-LVNSKKKQI 140
+ S R P R SR + G C G P +++GQ L++ K+++
Sbjct: 67 SGSNRLLPQGRMAYGSRRNAAGTCSETGNRPRRETAGQDLLDHLKERV 114
>05_06_0105 +
25607374-25607673,25608319-25608377,25608761-25608917,
25609157-25609461,25609866-25609986,25610334-25610422,
25610491-25610569
Length = 369
Score = 26.6 bits (56), Expect = 7.7
Identities = 11/44 (25%), Positives = 24/44 (54%)
Frame = -3
Query: 410 QLVREALRLSHVLQTCGIEVNEVGSIAYAATQVGIVNKFGEDSD 279
++ R + +V++ CG ++ + GS+ + Q +VN D+D
Sbjct: 189 KITRSIADIRNVVKDCGAKLADPGSVTFRFRQARVVNIKVTDAD 232
>04_01_0046 +
510721-510790,511048-511121,511459-511729,511865-512243,
512550-512771,513130-513259,514311-514367,514756-515046
Length = 497
Score = 26.6 bits (56), Expect = 7.7
Identities = 8/28 (28%), Positives = 18/28 (64%)
Frame = +3
Query: 228 VLDEEHERSIGHHLVEDVGIFSKLIYDT 311
++D +G+H E++G+F +++ DT
Sbjct: 85 IVDAIERLGVGYHFHEEIGMFMRVLNDT 112
>02_05_0467 -
29278795-29278903,29281467-29281585,29281754-29281875,
29283737-29283920
Length = 177
Score = 26.6 bits (56), Expect = 7.7
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +3
Query: 135 GYICFFLEFTSCPDDCGFGDTPGEQQLPGDFVLDEEHERSIGHHLVE 275
G+ FL PD+ GF D P DF ++ ++ G HL+E
Sbjct: 47 GFHLLFLH-VQVPDEDGFDDMDSIYASPPDFQRMKQRDKIRGLHLLE 92
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,223,333
Number of Sequences: 37544
Number of extensions: 175549
Number of successful extensions: 521
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 516
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 730630428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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