Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_K04
(137 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067218-1|AAC17021.1| 1451|Caenorhabditis elegans Hypothetical ... 26 3.2
AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin for... 26 4.2
AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protei... 26 4.2
Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical pr... 25 5.6
AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-l... 25 5.6
AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-l... 25 5.6
AC006729-6|AAF60464.1| 282|Caenorhabditis elegans Hypothetical ... 25 5.6
Z96048-1|CAB09419.1| 351|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z82051-8|CAB04814.1| 349|Caenorhabditis elegans Hypothetical pr... 25 9.7
U41534-11|AAM22028.1| 686|Caenorhabditis elegans Hypothetical p... 25 9.7
U41534-10|AAK68177.1| 687|Caenorhabditis elegans Hypothetical p... 25 9.7
U41534-9|AAM22029.1| 690|Caenorhabditis elegans Hypothetical pr... 25 9.7
>AF067218-1|AAC17021.1| 1451|Caenorhabditis elegans Hypothetical
protein K10E9.1 protein.
Length = 1451
Score = 26.2 bits (55), Expect = 3.2
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = -3
Query: 129 FGMTWSFRAGTFFLR--FSSSDHARAATIRDMMQPSILNSFMID 4
FG+ W F+ FL+ F++ A A + D + N+ MID
Sbjct: 1082 FGVKWFFKLSRLFLKHGFTTHSFAIANILFDRLSARKRNTMMID 1125
>AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin form B
protein.
Length = 4450
Score = 25.8 bits (54), Expect = 4.2
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1
Query: 37 HHVSNGGSSSMVRAAETEEEGSS 105
HH+S+ GSS + RAA+ + G +
Sbjct: 4241 HHMSHAGSSYLSRAAQDAQVGGT 4263
>AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protein
805, isoform b protein.
Length = 4450
Score = 25.8 bits (54), Expect = 4.2
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1
Query: 37 HHVSNGGSSSMVRAAETEEEGSS 105
HH+S+ GSS + RAA+ + G +
Sbjct: 4241 HHMSHAGSSYLSRAAQDAQVGGT 4263
>Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical
protein B0457.1b protein.
Length = 1012
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -3
Query: 117 WSFRAGTFFLRFSSSDHARAATIRDMMQPSILNS 16
W +R G SS +H R RD+M P + +S
Sbjct: 804 WMYRRGCGGSSNSSPNHKRHNVQRDLMSPGVNSS 837
>Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical
protein B0457.1a protein.
Length = 1014
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -3
Query: 117 WSFRAGTFFLRFSSSDHARAATIRDMMQPSILNS 16
W +R G SS +H R RD+M P + +S
Sbjct: 806 WMYRRGCGGSSNSSPNHKRHNVQRDLMSPGVNSS 839
>AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-like
protein LAT-1B protein.
Length = 1012
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -3
Query: 117 WSFRAGTFFLRFSSSDHARAATIRDMMQPSILNS 16
W +R G SS +H R RD+M P + +S
Sbjct: 804 WMYRRGCGGSSNSSPNHKRHNVQRDLMSPGVNSS 837
>AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-like
protein LAT-1A protein.
Length = 1014
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -3
Query: 117 WSFRAGTFFLRFSSSDHARAATIRDMMQPSILNS 16
W +R G SS +H R RD+M P + +S
Sbjct: 806 WMYRRGCGGSSNSSPNHKRHNVQRDLMSPGVNSS 839
>AC006729-6|AAF60464.1| 282|Caenorhabditis elegans Hypothetical
protein Y24D9A.5 protein.
Length = 282
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = -3
Query: 117 WSFRAGTFFLRFSSSDHARAATIRDMMQPSILNSF 13
W F + F RF++ ++ ++R +P IL F
Sbjct: 164 WPFGGKSVFYRFTNLIQKKSFSVRSSKRPGILQPF 198
>Z96048-1|CAB09419.1| 351|Caenorhabditis elegans Hypothetical
protein F57A10.1 protein.
Length = 351
Score = 24.6 bits (51), Expect = 9.7
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -3
Query: 132 FFGMTWSFRAGTFF 91
FFG+ W+F G FF
Sbjct: 146 FFGVLWAFAVGHFF 159
>Z82051-8|CAB04814.1| 349|Caenorhabditis elegans Hypothetical
protein T23D5.11 protein.
Length = 349
Score = 24.6 bits (51), Expect = 9.7
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -3
Query: 132 FFGMTWSFRAGTFF 91
FFG+ W+F G FF
Sbjct: 131 FFGVLWAFAVGHFF 144
>U41534-11|AAM22028.1| 686|Caenorhabditis elegans Hypothetical
protein C16A3.1b protein.
Length = 686
Score = 24.6 bits (51), Expect = 9.7
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 20 FKILGCIMSLMVAARAWSELLKRRKKVPALKD 115
F+ GC S +AA + L+ RR K LKD
Sbjct: 385 FEAKGCTNSEELAAIMFKRLMIRRLKADVLKD 416
>U41534-10|AAK68177.1| 687|Caenorhabditis elegans Hypothetical
protein C16A3.1a protein.
Length = 687
Score = 24.6 bits (51), Expect = 9.7
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 20 FKILGCIMSLMVAARAWSELLKRRKKVPALKD 115
F+ GC S +AA + L+ RR K LKD
Sbjct: 386 FEAKGCTNSEELAAIMFKRLMIRRLKADVLKD 417
>U41534-9|AAM22029.1| 690|Caenorhabditis elegans Hypothetical
protein C16A3.1c protein.
Length = 690
Score = 24.6 bits (51), Expect = 9.7
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 20 FKILGCIMSLMVAARAWSELLKRRKKVPALKD 115
F+ GC S +AA + L+ RR K LKD
Sbjct: 389 FEAKGCTNSEELAAIMFKRLMIRRLKADVLKD 420
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.302 0.120 0.332
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,150,376
Number of Sequences: 27780
Number of extensions: 40334
Number of successful extensions: 86
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 86
length of database: 12,740,198
effective HSP length: 26
effective length of database: 12,017,918
effective search space used: 228340442
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 17 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.8 bits)
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