Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_J23
(586 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 189 1e-48
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 189 1e-48
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 188 3e-48
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 188 3e-48
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 188 3e-48
J05066-1|AAA27989.1| 261|Caenorhabditis elegans alpha-2 (IV) co... 188 3e-48
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 150 6e-37
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 150 6e-37
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 150 6e-37
J05067-1|AAB59179.1| 313|Caenorhabditis elegans clb-2 protein. 150 6e-37
Z49069-2|CAA88865.1| 333|Caenorhabditis elegans Hypothetical pr... 34 0.085
Z70271-3|CAA94234.1| 358|Caenorhabditis elegans Hypothetical pr... 33 0.15
U42439-7|AAA83511.1| 304|Caenorhabditis elegans Collagen protei... 31 0.46
U42437-5|AAA83499.1| 302|Caenorhabditis elegans Dumpy : shorter... 31 0.46
M23559-1|AAA27994.1| 302|Caenorhabditis elegans protein ( C.ele... 31 0.46
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 31 0.60
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 31 0.60
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 31 0.60
Z73969-6|CAA98236.1| 295|Caenorhabditis elegans Hypothetical pr... 31 0.80
Z66498-1|CAA91290.1| 304|Caenorhabditis elegans Hypothetical pr... 31 0.80
L11247-3|AAA28008.1| 278|Caenorhabditis elegans Collagen protei... 31 0.80
AF036699-5|AAB88359.1| 290|Caenorhabditis elegans Collagen prot... 31 0.80
AF016687-1|AAC48094.2| 315|Caenorhabditis elegans Dumpy : short... 31 0.80
Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical p... 30 1.1
Z68113-3|CAA92150.1| 333|Caenorhabditis elegans Hypothetical pr... 30 1.1
AF003386-13|AAB54250.1| 311|Caenorhabditis elegans Blistered cu... 30 1.1
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z81079-1|CAB03084.1| 650|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical p... 29 1.8
Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical p... 29 1.8
Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical p... 29 1.8
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 29 1.8
AF164959-3|AAD47825.1| 650|Caenorhabditis elegans CLE-1C protei... 29 1.8
AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protei... 29 1.8
AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protei... 29 1.8
AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen pro... 29 1.8
Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z68315-3|CAA92670.1| 430|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical pr... 29 2.4
AF024503-17|AAG24085.1| 354|Caenorhabditis elegans Hypothetical... 29 2.4
Z68005-4|CAA91992.2| 430|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z66499-3|CAA91300.1| 348|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z49938-2|CAA90187.1| 306|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z27079-4|CAA81591.1| 78|Caenorhabditis elegans Hypothetical pr... 29 3.2
M34451-1|AAA28143.1| 348|Caenorhabditis elegans protein ( C.ele... 29 3.2
AF036699-4|AAB88358.1| 281|Caenorhabditis elegans Collagen prot... 29 3.2
Z70681-1|CAA94580.1| 307|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z46791-2|CAA86756.1| 283|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical pr... 28 4.2
X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein. 28 4.2
U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protei... 28 4.2
U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter... 28 4.2
U21318-2|AAC46668.1| 285|Caenorhabditis elegans Collagen protei... 28 4.2
CU457737-9|CAM36330.1| 281|Caenorhabditis elegans Hypothetical ... 28 4.2
AL117195-28|CAB55014.1| 458|Caenorhabditis elegans Hypothetical... 28 4.2
AF000263-19|AAG00021.1| 321|Caenorhabditis elegans Collagen pro... 28 4.2
AC024751-11|ABF71718.1| 302|Caenorhabditis elegans Collagen pro... 28 4.2
Z75711-2|CAB00033.2| 425|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z49907-2|CAA90084.1| 324|Caenorhabditis elegans Hypothetical pr... 28 5.6
U80444-2|AAB37788.1| 305|Caenorhabditis elegans Collagen protei... 28 5.6
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 28 5.6
U50191-2|AAK31556.2| 335|Caenorhabditis elegans Dumpy : shorter... 28 5.6
U50191-1|AAO38600.2| 372|Caenorhabditis elegans Dumpy : shorter... 28 5.6
U23520-6|AAC46553.1| 287|Caenorhabditis elegans Collagen protei... 28 5.6
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 28 5.6
L12692-1|AAA17395.2| 356|Caenorhabditis elegans collagen protein. 28 5.6
J03146-1|AAA65468.1| 324|Caenorhabditis elegans collagen protein. 28 5.6
AL032634-3|CAE45092.1| 412|Caenorhabditis elegans Hypothetical ... 28 5.6
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 28 5.6
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 28 5.6
AF038613-11|AAB92054.2| 836|Caenorhabditis elegans Mammalian el... 28 5.6
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 28 5.6
AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen prot... 28 5.6
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z83228-2|CAB05733.1| 370|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z81050-3|CAB02849.1| 291|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 27 7.4
U80441-8|AAB37656.1| 284|Caenorhabditis elegans Dumpy : shorter... 27 7.4
U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protei... 27 7.4
L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen... 27 7.4
AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical... 27 7.4
AF106577-5|AAC78192.2| 353|Caenorhabditis elegans Hypothetical ... 27 7.4
AF068721-4|AAC19260.1| 298|Caenorhabditis elegans Hypothetical ... 27 7.4
AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen prot... 27 7.4
AC087081-13|AAK66033.1| 253|Caenorhabditis elegans Hypothetical... 27 7.4
AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen prot... 27 7.4
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z78201-2|CAB01588.1| 324|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z70682-4|CAA94581.1| 299|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z70207-1|CAA94128.1| 291|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z54237-5|CAN86900.1| 273|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z54237-4|CAN86899.1| 297|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical pr... 27 9.8
X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein. 27 9.8
X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein. 27 9.8
U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protei... 27 9.8
U50191-3|AAK31557.1| 380|Caenorhabditis elegans Dumpy : shorter... 27 9.8
U41748-3|AAA83336.1| 452|Caenorhabditis elegans Dumpy : shorter... 27 9.8
U40187-2|AAA81159.1| 282|Caenorhabditis elegans Collagen protei... 27 9.8
U40060-2|AAP82656.1| 108|Caenorhabditis elegans Collagen protei... 27 9.8
U40060-1|AAA81141.1| 341|Caenorhabditis elegans Collagen protei... 27 9.8
M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein. 27 9.8
M25479-1|AAA27993.1| 282|Caenorhabditis elegans collagen protein. 27 9.8
L12706-1|AAA17398.2| 360|Caenorhabditis elegans collagen protein. 27 9.8
AF465981-1|AAL76993.1| 324|Caenorhabditis elegans cuticle colla... 27 9.8
AF262406-1|AAL08218.1| 324|Caenorhabditis elegans cuticle colla... 27 9.8
AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen prot... 27 9.8
AC024805-16|AAK39336.1| 448|Caenorhabditis elegans Hypothetical... 27 9.8
AC024778-1|AAF60567.1| 393|Caenorhabditis elegans Collagen prot... 27 9.8
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 189 bits (461), Expect = 1e-48
Identities = 80/113 (70%), Positives = 93/113 (82%)
Frame = +1
Query: 247 YLTGILLVRHSQREVVPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMP 426
Y G +LV+HSQ VP+C G KLWDGYSLLYI+GNEK+HNQDLG+AGSC+++FSTMP
Sbjct: 1528 YRDGFVLVKHSQTTEVPRCPEGQTKLWDGYSLLYIEGNEKSHNQDLGHAGSCLQRFSTMP 1587
Query: 427 FLFCDLNDVCNYASRNDRSYWLSTGQPIPMMPVEGNEIVQYISRCVVCEVPSN 585
FLFCD N+VCNYASRND+SYWLST + IPMMPV EI YISRC VCE P+N
Sbjct: 1588 FLFCDFNNVCNYASRNDKSYWLSTSEAIPMMPVNEREIEPYISRCAVCEAPAN 1640
Score = 54.0 bits (124), Expect = 7e-08
Identities = 36/121 (29%), Positives = 54/121 (44%), Gaps = 8/121 (6%)
Frame = +1
Query: 232 CATTDYLTGILLVRHSQREVVPQCEPGHVKLWDGYSL-LYIDGNEKAHNQDLGYAGSCVR 408
CA + + V HSQ +P C G LW GYS ++ + Q L GSC+
Sbjct: 1632 CAVCEAPANTIAV-HSQTIQIPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSLSSPGSCLE 1690
Query: 409 KFSTMPFLFCD-LNDVCNYASRNDRSYWLSTGQ-----PIP-MMPVEGNEIVQYISRCVV 567
F PF+ C+ C+Y + N S+WL+T +P ++ + +SRC V
Sbjct: 1691 DFRATPFIECNGARGSCHYFA-NKFSFWLTTIDNDSEFKVPESQTLKSGNLRTRVSRCQV 1749
Query: 568 C 570
C
Sbjct: 1750 C 1750
Score = 28.7 bits (61), Expect = 3.2
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPGSD 51
EPGP G PG DG G+D
Sbjct: 112 EPGPPGAPGWDGCNGTD 128
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGSD 51
PGP G+PG G PG D
Sbjct: 137 PGPPGMPGFPGPPGMD 152
Score = 27.5 bits (58), Expect = 7.4
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPG 45
EPG +G+PG+ G PG
Sbjct: 1439 EPGEKGLPGLPGAPG 1453
Score = 27.5 bits (58), Expect = 7.4
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +1
Query: 7 GPRGVPGIDGLPGSD 51
G +G+PG+DG PG+D
Sbjct: 1456 GEKGMPGLDGPPGND 1470
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 189 bits (461), Expect = 1e-48
Identities = 80/113 (70%), Positives = 93/113 (82%)
Frame = +1
Query: 247 YLTGILLVRHSQREVVPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMP 426
Y G +LV+HSQ VP+C G KLWDGYSLLYI+GNEK+HNQDLG+AGSC+++FSTMP
Sbjct: 1529 YRDGFVLVKHSQTTEVPRCPEGQTKLWDGYSLLYIEGNEKSHNQDLGHAGSCLQRFSTMP 1588
Query: 427 FLFCDLNDVCNYASRNDRSYWLSTGQPIPMMPVEGNEIVQYISRCVVCEVPSN 585
FLFCD N+VCNYASRND+SYWLST + IPMMPV EI YISRC VCE P+N
Sbjct: 1589 FLFCDFNNVCNYASRNDKSYWLSTSEAIPMMPVNEREIEPYISRCAVCEAPAN 1641
Score = 54.0 bits (124), Expect = 7e-08
Identities = 36/121 (29%), Positives = 54/121 (44%), Gaps = 8/121 (6%)
Frame = +1
Query: 232 CATTDYLTGILLVRHSQREVVPQCEPGHVKLWDGYSL-LYIDGNEKAHNQDLGYAGSCVR 408
CA + + V HSQ +P C G LW GYS ++ + Q L GSC+
Sbjct: 1633 CAVCEAPANTIAV-HSQTIQIPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSLSSPGSCLE 1691
Query: 409 KFSTMPFLFCD-LNDVCNYASRNDRSYWLSTGQ-----PIP-MMPVEGNEIVQYISRCVV 567
F PF+ C+ C+Y + N S+WL+T +P ++ + +SRC V
Sbjct: 1692 DFRATPFIECNGARGSCHYFA-NKFSFWLTTIDNDSEFKVPESQTLKSGNLRTRVSRCQV 1750
Query: 568 C 570
C
Sbjct: 1751 C 1751
Score = 28.7 bits (61), Expect = 3.2
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPGSD 51
EPGP G PG DG G+D
Sbjct: 112 EPGPPGAPGWDGCNGTD 128
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGSD 51
PGP G+PG G PG D
Sbjct: 137 PGPPGMPGFPGPPGMD 152
Score = 27.5 bits (58), Expect = 7.4
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPG 45
EPG +G+PG+ G PG
Sbjct: 1440 EPGEKGLPGLPGAPG 1454
Score = 27.5 bits (58), Expect = 7.4
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +1
Query: 7 GPRGVPGIDGLPGSD 51
G +G+PG+DG PG+D
Sbjct: 1457 GEKGMPGLDGPPGND 1471
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 188 bits (457), Expect = 3e-48
Identities = 79/113 (69%), Positives = 93/113 (82%)
Frame = +1
Query: 247 YLTGILLVRHSQREVVPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMP 426
Y G +LV+HSQ VP+C G KLWDGYSLLYI+GNEK+HNQDLG+AGSC+++FSTMP
Sbjct: 1529 YRDGFVLVKHSQTTEVPRCPEGQTKLWDGYSLLYIEGNEKSHNQDLGHAGSCLQRFSTMP 1588
Query: 427 FLFCDLNDVCNYASRNDRSYWLSTGQPIPMMPVEGNEIVQYISRCVVCEVPSN 585
FLFCD N+VCNYASRN++SYWLST + IPMMPV EI YISRC VCE P+N
Sbjct: 1589 FLFCDFNNVCNYASRNEKSYWLSTSEAIPMMPVNEREIEPYISRCAVCEAPAN 1641
Score = 51.2 bits (117), Expect = 5e-07
Identities = 35/121 (28%), Positives = 53/121 (43%), Gaps = 8/121 (6%)
Frame = +1
Query: 232 CATTDYLTGILLVRHSQREVVPQCEPGHVKLWDGYSL-LYIDGNEKAHNQDLGYAGSCVR 408
CA + + V HSQ +P C G LW GYS ++ + Q GSC+
Sbjct: 1633 CAVCEAPANTIAV-HSQTIQIPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSPSSPGSCLE 1691
Query: 409 KFSTMPFLFCD-LNDVCNYASRNDRSYWLSTGQ-----PIP-MMPVEGNEIVQYISRCVV 567
F PF+ C+ C+Y + N S+WL+T +P ++ + +SRC V
Sbjct: 1692 DFRATPFIECNGARGSCHYFA-NKFSFWLTTIDNDSEFKVPESQTLKSGNLRTRVSRCQV 1750
Query: 568 C 570
C
Sbjct: 1751 C 1751
Score = 28.7 bits (61), Expect = 3.2
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPGSD 51
EPGP G PG DG G+D
Sbjct: 112 EPGPPGAPGWDGCNGTD 128
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGSD 51
PGP G+PG G PG D
Sbjct: 137 PGPPGMPGFPGPPGMD 152
Score = 27.5 bits (58), Expect = 7.4
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPG 45
EPG +G+PG+ G PG
Sbjct: 1440 EPGEKGLPGLPGAPG 1454
Score = 27.5 bits (58), Expect = 7.4
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +1
Query: 7 GPRGVPGIDGLPGSD 51
G +G+PG+DG PG+D
Sbjct: 1457 GEKGMPGLDGPPGND 1471
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 188 bits (457), Expect = 3e-48
Identities = 79/113 (69%), Positives = 93/113 (82%)
Frame = +1
Query: 247 YLTGILLVRHSQREVVPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMP 426
Y G +LV+HSQ VP+C G KLWDGYSLLYI+GNEK+HNQDLG+AGSC+++FSTMP
Sbjct: 1528 YRDGFVLVKHSQTTEVPRCPEGQTKLWDGYSLLYIEGNEKSHNQDLGHAGSCLQRFSTMP 1587
Query: 427 FLFCDLNDVCNYASRNDRSYWLSTGQPIPMMPVEGNEIVQYISRCVVCEVPSN 585
FLFCD N+VCNYASRN++SYWLST + IPMMPV EI YISRC VCE P+N
Sbjct: 1588 FLFCDFNNVCNYASRNEKSYWLSTSEAIPMMPVNEREIEPYISRCAVCEAPAN 1640
Score = 51.2 bits (117), Expect = 5e-07
Identities = 35/121 (28%), Positives = 53/121 (43%), Gaps = 8/121 (6%)
Frame = +1
Query: 232 CATTDYLTGILLVRHSQREVVPQCEPGHVKLWDGYSL-LYIDGNEKAHNQDLGYAGSCVR 408
CA + + V HSQ +P C G LW GYS ++ + Q GSC+
Sbjct: 1632 CAVCEAPANTIAV-HSQTIQIPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSPSSPGSCLE 1690
Query: 409 KFSTMPFLFCD-LNDVCNYASRNDRSYWLSTGQ-----PIP-MMPVEGNEIVQYISRCVV 567
F PF+ C+ C+Y + N S+WL+T +P ++ + +SRC V
Sbjct: 1691 DFRATPFIECNGARGSCHYFA-NKFSFWLTTIDNDSEFKVPESQTLKSGNLRTRVSRCQV 1749
Query: 568 C 570
C
Sbjct: 1750 C 1750
Score = 28.7 bits (61), Expect = 3.2
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPGSD 51
EPGP G PG DG G+D
Sbjct: 112 EPGPPGAPGWDGCNGTD 128
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGSD 51
PGP G+PG G PG D
Sbjct: 137 PGPPGMPGFPGPPGMD 152
Score = 27.5 bits (58), Expect = 7.4
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPG 45
EPG +G+PG+ G PG
Sbjct: 1439 EPGEKGLPGLPGAPG 1453
Score = 27.5 bits (58), Expect = 7.4
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +1
Query: 7 GPRGVPGIDGLPGSD 51
G +G+PG+DG PG+D
Sbjct: 1456 GEKGMPGLDGPPGND 1470
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) collagen
protein.
Length = 1795
Score = 188 bits (457), Expect = 3e-48
Identities = 79/113 (69%), Positives = 93/113 (82%)
Frame = +1
Query: 247 YLTGILLVRHSQREVVPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMP 426
Y G +LV+HSQ VP+C G KLWDGYSLLYI+GNEK+HNQDLG+AGSC+++FSTMP
Sbjct: 1565 YRDGFVLVKHSQTTEVPRCPEGQTKLWDGYSLLYIEGNEKSHNQDLGHAGSCLQRFSTMP 1624
Query: 427 FLFCDLNDVCNYASRNDRSYWLSTGQPIPMMPVEGNEIVQYISRCVVCEVPSN 585
FLFCD N+VCNYASRN++SYWLST + IPMMPV EI YISRC VCE P+N
Sbjct: 1625 FLFCDFNNVCNYASRNEKSYWLSTSEAIPMMPVNEREIEPYISRCAVCEAPAN 1677
Score = 51.2 bits (117), Expect = 5e-07
Identities = 35/121 (28%), Positives = 53/121 (43%), Gaps = 8/121 (6%)
Frame = +1
Query: 232 CATTDYLTGILLVRHSQREVVPQCEPGHVKLWDGYSL-LYIDGNEKAHNQDLGYAGSCVR 408
CA + + V HSQ +P C G LW GYS ++ + Q GSC+
Sbjct: 1669 CAVCEAPANTIAV-HSQTIQIPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSPSSPGSCLE 1727
Query: 409 KFSTMPFLFCD-LNDVCNYASRNDRSYWLSTGQ-----PIP-MMPVEGNEIVQYISRCVV 567
F PF+ C+ C+Y + N S+WL+T +P ++ + +SRC V
Sbjct: 1728 DFRATPFIECNGARGSCHYFA-NKFSFWLTTIDNDSEFKVPESQTLKSGNLRTRVSRCQV 1786
Query: 568 C 570
C
Sbjct: 1787 C 1787
Score = 28.7 bits (61), Expect = 3.2
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPGSD 51
EPGP G PG DG G+D
Sbjct: 112 EPGPPGAPGWDGCNGTD 128
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGSD 51
PGP G+PG G PG D
Sbjct: 137 PGPPGMPGFPGPPGMD 152
Score = 27.5 bits (58), Expect = 7.4
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPG 45
EPG +G+PG+ G PG
Sbjct: 1476 EPGEKGLPGLPGAPG 1490
Score = 27.5 bits (58), Expect = 7.4
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +1
Query: 7 GPRGVPGIDGLPGSD 51
G +G+PG+DG PG+D
Sbjct: 1493 GEKGMPGLDGPPGND 1507
>J05066-1|AAA27989.1| 261|Caenorhabditis elegans alpha-2 (IV)
collagen protein.
Length = 261
Score = 188 bits (457), Expect = 3e-48
Identities = 79/113 (69%), Positives = 93/113 (82%)
Frame = +1
Query: 247 YLTGILLVRHSQREVVPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMP 426
Y G +LV+HSQ VP+C G KLWDGYSLLYI+GNEK+HNQDLG+AGSC+++FSTMP
Sbjct: 31 YRDGFVLVKHSQTTEVPRCPEGQTKLWDGYSLLYIEGNEKSHNQDLGHAGSCLQRFSTMP 90
Query: 427 FLFCDLNDVCNYASRNDRSYWLSTGQPIPMMPVEGNEIVQYISRCVVCEVPSN 585
FLFCD N+VCNYASRN++SYWLST + IPMMPV EI YISRC VCE P+N
Sbjct: 91 FLFCDFNNVCNYASRNEKSYWLSTSEAIPMMPVNEREIEPYISRCAVCEAPAN 143
Score = 54.0 bits (124), Expect = 7e-08
Identities = 36/121 (29%), Positives = 54/121 (44%), Gaps = 8/121 (6%)
Frame = +1
Query: 232 CATTDYLTGILLVRHSQREVVPQCEPGHVKLWDGYSL-LYIDGNEKAHNQDLGYAGSCVR 408
CA + + V HSQ +P C G LW GYS ++ + Q L GSC+
Sbjct: 135 CAVCEAPANTIAV-HSQTIQIPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSLSSPGSCLE 193
Query: 409 KFSTMPFLFCD-LNDVCNYASRNDRSYWLSTGQ-----PIP-MMPVEGNEIVQYISRCVV 567
F PF+ C+ C+Y + N S+WL+T +P ++ + +SRC V
Sbjct: 194 DFRATPFIECNGARGSCHYFA-NKFSFWLTTIDNDSEFKVPESQTLKSGNLRTRVSRCQV 252
Query: 568 C 570
C
Sbjct: 253 C 253
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical protein
K04H4.1b protein.
Length = 1502
Score = 150 bits (364), Expect = 6e-37
Identities = 66/111 (59%), Positives = 82/111 (73%), Gaps = 2/111 (1%)
Frame = +1
Query: 256 GILLVRHSQREVVPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLF 435
G +HSQ VPQC PG +LW+GYSLLY+ GN +A QDLG GSC+ KF+TMPF+F
Sbjct: 1278 GFTFAKHSQTTAVPQCPPGASQLWEGYSLLYVQGNGRASGQDLGQPGSCLSKFNTMPFMF 1337
Query: 436 CDLNDVCNYASRNDRSYWLSTGQPI-PMM-PVEGNEIVQYISRCVVCEVPS 582
C++N VC+ +SRND S+WLST +P+ PMM PV G I YISRC VCEVP+
Sbjct: 1338 CNMNSVCHVSSRNDYSFWLSTDEPMTPMMNPVTGTAIRPYISRCAVCEVPT 1388
Score = 64.5 bits (150), Expect = 5e-11
Identities = 40/120 (33%), Positives = 57/120 (47%), Gaps = 7/120 (5%)
Frame = +1
Query: 232 CATTDYLTGILLVRHSQREVVPQCEPGHVKLWDGYS-LLYIDGNEKAHNQDLGYAGSCVR 408
CA + T I+ V HSQ VPQC G +W GYS +++ + Q L GSC+
Sbjct: 1381 CAVCEVPTQIIAV-HSQDTSVPQCPQGWSGMWTGYSFVMHTAAGAEGTGQSLQSPGSCLE 1439
Query: 409 KFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQP-----IPM-MPVEGNEIVQYISRCVVC 570
+F +PF+ C CNY + N +WLS PM ++ + +SRC VC
Sbjct: 1440 EFRAVPFIECHGRGTCNYYATN-HGFWLSIVDQDKQFRKPMSQTLKAGGLKDRVSRCQVC 1498
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGS 48
PGP G PG DGLPG+
Sbjct: 589 PGPDGYPGRDGLPGT 603
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPGSD 51
EPG G PG DGLPG D
Sbjct: 442 EPGDCGYPGEDGLPGYD 458
Score = 28.3 bits (60), Expect = 4.2
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +1
Query: 4 PGPRGVPGIDGLPG 45
PGP G PGI G+PG
Sbjct: 840 PGPPGYPGITGMPG 853
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +1
Query: 4 PGPRGVPGIDGLPG 45
PG G PGIDG+PG
Sbjct: 405 PGAPGQPGIDGMPG 418
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +1
Query: 4 PGPRGVPGIDGLPG 45
PGP G+PG DGL G
Sbjct: 688 PGPSGIPGEDGLVG 701
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPGS 48
+PGP G PG DG PG+
Sbjct: 995 QPGPVGPPGDDGYPGA 1010
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGSD 51
PG RG+PG+DG G D
Sbjct: 1067 PGERGLPGLDGKRGHD 1082
Score = 27.5 bits (58), Expect = 7.4
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +1
Query: 4 PGPRGVPGIDGLPG 45
PG GVPG++G+PG
Sbjct: 1085 PGAPGVPGVEGVPG 1098
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1
Query: 7 GPRGVPGIDGLPG 45
GP G+PG DGLPG
Sbjct: 794 GPPGLPGQDGLPG 806
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical protein
K04H4.1a protein.
Length = 1759
Score = 150 bits (364), Expect = 6e-37
Identities = 66/111 (59%), Positives = 82/111 (73%), Gaps = 2/111 (1%)
Frame = +1
Query: 256 GILLVRHSQREVVPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLF 435
G +HSQ VPQC PG +LW+GYSLLY+ GN +A QDLG GSC+ KF+TMPF+F
Sbjct: 1535 GFTFAKHSQTTAVPQCPPGASQLWEGYSLLYVQGNGRASGQDLGQPGSCLSKFNTMPFMF 1594
Query: 436 CDLNDVCNYASRNDRSYWLSTGQPI-PMM-PVEGNEIVQYISRCVVCEVPS 582
C++N VC+ +SRND S+WLST +P+ PMM PV G I YISRC VCEVP+
Sbjct: 1595 CNMNSVCHVSSRNDYSFWLSTDEPMTPMMNPVTGTAIRPYISRCAVCEVPT 1645
Score = 64.5 bits (150), Expect = 5e-11
Identities = 40/120 (33%), Positives = 57/120 (47%), Gaps = 7/120 (5%)
Frame = +1
Query: 232 CATTDYLTGILLVRHSQREVVPQCEPGHVKLWDGYS-LLYIDGNEKAHNQDLGYAGSCVR 408
CA + T I+ V HSQ VPQC G +W GYS +++ + Q L GSC+
Sbjct: 1638 CAVCEVPTQIIAV-HSQDTSVPQCPQGWSGMWTGYSFVMHTAAGAEGTGQSLQSPGSCLE 1696
Query: 409 KFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQP-----IPM-MPVEGNEIVQYISRCVVC 570
+F +PF+ C CNY + N +WLS PM ++ + +SRC VC
Sbjct: 1697 EFRAVPFIECHGRGTCNYYATN-HGFWLSIVDQDKQFRKPMSQTLKAGGLKDRVSRCQVC 1755
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGS 48
PGP G PG DGLPG+
Sbjct: 846 PGPDGYPGRDGLPGT 860
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPGSD 51
EPG G PG DGLPG D
Sbjct: 442 EPGDCGYPGEDGLPGYD 458
Score = 28.3 bits (60), Expect = 4.2
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +1
Query: 4 PGPRGVPGIDGLPG 45
PGP G PGI G+PG
Sbjct: 1097 PGPPGYPGITGMPG 1110
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +1
Query: 4 PGPRGVPGIDGLPG 45
PG G PGIDG+PG
Sbjct: 405 PGAPGQPGIDGMPG 418
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +1
Query: 4 PGPRGVPGIDGLPG 45
PGP G+PG DGL G
Sbjct: 945 PGPSGIPGEDGLVG 958
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPGS 48
+PGP G PG DG PG+
Sbjct: 1252 QPGPVGPPGDDGYPGA 1267
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGSD 51
PG RG+PG+DG G D
Sbjct: 1324 PGERGLPGLDGKRGHD 1339
Score = 27.5 bits (58), Expect = 7.4
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +1
Query: 4 PGPRGVPGIDGLPG 45
PG GVPG++G+PG
Sbjct: 1342 PGAPGVPGVEGVPG 1355
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1
Query: 7 GPRGVPGIDGLPG 45
GP G+PG DGLPG
Sbjct: 1051 GPPGLPGQDGLPG 1063
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) collagen
protein.
Length = 1758
Score = 150 bits (364), Expect = 6e-37
Identities = 66/111 (59%), Positives = 82/111 (73%), Gaps = 2/111 (1%)
Frame = +1
Query: 256 GILLVRHSQREVVPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLF 435
G +HSQ VPQC PG +LW+GYSLLY+ GN +A QDLG GSC+ KF+TMPF+F
Sbjct: 1534 GFTFAKHSQTTAVPQCPPGASQLWEGYSLLYVQGNGRASGQDLGQPGSCLSKFNTMPFMF 1593
Query: 436 CDLNDVCNYASRNDRSYWLSTGQPI-PMM-PVEGNEIVQYISRCVVCEVPS 582
C++N VC+ +SRND S+WLST +P+ PMM PV G I YISRC VCEVP+
Sbjct: 1594 CNMNSVCHVSSRNDYSFWLSTDEPMTPMMNPVTGTAIRPYISRCAVCEVPT 1644
Score = 61.7 bits (143), Expect = 4e-10
Identities = 39/120 (32%), Positives = 56/120 (46%), Gaps = 7/120 (5%)
Frame = +1
Query: 232 CATTDYLTGILLVRHSQREVVPQCEPGHVKLWDGYS-LLYIDGNEKAHNQDLGYAGSCVR 408
CA + T I+ V HSQ VPQC G +W GYS +++ + Q L GSC+
Sbjct: 1637 CAVCEVPTQIIAV-HSQDTSVPQCPQGWSGMWTGYSFVMHTAAGAEGTGQSLQSPGSCLE 1695
Query: 409 KFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQP-----IPM-MPVEGNEIVQYISRCVVC 570
+F +PF+ C CNY + N +W S PM ++ + +SRC VC
Sbjct: 1696 EFRAVPFIECHGRGTCNYYATN-HGFWPSIVDQDKQFRKPMSQTLKAGGLKDRVSRCQVC 1754
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGS 48
PGP G PG DGLPG+
Sbjct: 845 PGPDGYPGRDGLPGT 859
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPGSD 51
EPG G PG DGLPG D
Sbjct: 441 EPGDCGYPGEDGLPGYD 457
Score = 28.3 bits (60), Expect = 4.2
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +1
Query: 4 PGPRGVPGIDGLPG 45
PGP G PGI G+PG
Sbjct: 1096 PGPPGYPGITGMPG 1109
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +1
Query: 4 PGPRGVPGIDGLPG 45
PG G PGIDG+PG
Sbjct: 404 PGAPGQPGIDGMPG 417
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +1
Query: 4 PGPRGVPGIDGLPG 45
PGP G+PG DGL G
Sbjct: 944 PGPSGIPGEDGLVG 957
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPGS 48
+PGP G PG DG PG+
Sbjct: 1251 QPGPVGPPGDDGYPGA 1266
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGSD 51
PG RG+PG+DG G D
Sbjct: 1323 PGERGLPGLDGKRGHD 1338
Score = 27.5 bits (58), Expect = 7.4
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +1
Query: 4 PGPRGVPGIDGLPG 45
PG GVPG++G+PG
Sbjct: 1341 PGAPGVPGVEGVPG 1354
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +1
Query: 4 PGPRGVPGIDGLPG 45
PG G PG+DGLPG
Sbjct: 762 PGTPGEPGMDGLPG 775
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1
Query: 7 GPRGVPGIDGLPG 45
GP G+PG DGLPG
Sbjct: 1050 GPPGLPGQDGLPG 1062
>J05067-1|AAB59179.1| 313|Caenorhabditis elegans clb-2 protein.
Length = 313
Score = 150 bits (364), Expect = 6e-37
Identities = 66/111 (59%), Positives = 82/111 (73%), Gaps = 2/111 (1%)
Frame = +1
Query: 256 GILLVRHSQREVVPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLF 435
G +HSQ VPQC PG +LW+GYSLLY+ GN +A QDLG GSC+ KF+TMPF+F
Sbjct: 89 GFTFAKHSQTTAVPQCPPGASQLWEGYSLLYVQGNGRASGQDLGQPGSCLSKFNTMPFMF 148
Query: 436 CDLNDVCNYASRNDRSYWLSTGQPI-PMM-PVEGNEIVQYISRCVVCEVPS 582
C++N VC+ +SRND S+WLST +P+ PMM PV G I YISRC VCEVP+
Sbjct: 149 CNMNSVCHVSSRNDYSFWLSTDEPMTPMMNPVTGTAIRPYISRCAVCEVPT 199
Score = 61.7 bits (143), Expect = 4e-10
Identities = 39/120 (32%), Positives = 56/120 (46%), Gaps = 7/120 (5%)
Frame = +1
Query: 232 CATTDYLTGILLVRHSQREVVPQCEPGHVKLWDGYS-LLYIDGNEKAHNQDLGYAGSCVR 408
CA + T I+ V HSQ VPQC G +W GYS +++ + Q L GSC+
Sbjct: 192 CAVCEVPTQIIAV-HSQDTSVPQCPQGWSGMWTGYSFVMHTAAGAEGTGQSLQSPGSCLE 250
Query: 409 KFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQP-----IPM-MPVEGNEIVQYISRCVVC 570
+F +PF+ C CNY + N +W S PM ++ + +SRC VC
Sbjct: 251 EFRAVPFIECHGRGTCNYYATN-HGFWPSIVDQDKQFRKPMSQTLKAGGLKDRVSRCQVC 309
>Z49069-2|CAA88865.1| 333|Caenorhabditis elegans Hypothetical
protein K12D12.3 protein.
Length = 333
Score = 33.9 bits (74), Expect = 0.085
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGSD 51
PGP GVPG+DG PG D
Sbjct: 140 PGPNGVPGVDGKPGHD 155
>Z70271-3|CAA94234.1| 358|Caenorhabditis elegans Hypothetical
protein W08D2.6 protein.
Length = 358
Score = 33.1 bits (72), Expect = 0.15
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGSD 51
PGP GVPG+DG PG D
Sbjct: 157 PGPNGVPGLDGKPGLD 172
>U42439-7|AAA83511.1| 304|Caenorhabditis elegans Collagen protein
110 protein.
Length = 304
Score = 31.5 bits (68), Expect = 0.46
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPG 45
EPGPRG PG +GLPG
Sbjct: 157 EPGPRGSPGNNGLPG 171
>U42437-5|AAA83499.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 13 protein.
Length = 302
Score = 31.5 bits (68), Expect = 0.46
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPGSD 51
+PGP+G PG DG PG+D
Sbjct: 247 QPGPKGPPGPDGKPGAD 263
Score = 28.3 bits (60), Expect = 4.2
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPGSD 51
EPGP G PG G PG+D
Sbjct: 226 EPGPVGPPGPSGQPGND 242
Score = 27.1 bits (57), Expect = 9.8
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPG 45
+PGP+G PG G PG
Sbjct: 104 QPGPQGAPGAPGKPG 118
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +1
Query: 4 PGPRGVPGIDGLPG 45
PGP G PG DG PG
Sbjct: 233 PGPSGQPGNDGTPG 246
>M23559-1|AAA27994.1| 302|Caenorhabditis elegans protein (
C.elegans collagen (dpy-13) gene, complete cds. ).
Length = 302
Score = 31.5 bits (68), Expect = 0.46
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPGSD 51
+PGP+G PG DG PG+D
Sbjct: 247 QPGPKGPPGPDGKPGAD 263
Score = 28.3 bits (60), Expect = 4.2
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPGSD 51
EPGP G PG G PG+D
Sbjct: 226 EPGPVGPPGPSGQPGND 242
Score = 27.1 bits (57), Expect = 9.8
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPG 45
+PGP+G PG G PG
Sbjct: 104 QPGPQGAPGAPGKPG 118
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +1
Query: 4 PGPRGVPGIDGLPG 45
PGP G PG DG PG
Sbjct: 233 PGPSGQPGNDGTPG 246
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 31.1 bits (67), Expect = 0.60
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGSD 51
PGP+G PG DG PG+D
Sbjct: 242 PGPKGAPGPDGPPGAD 257
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -3
Query: 44 PGRPSIPGTPRGPG 3
PGRP PGTP PG
Sbjct: 114 PGRPGAPGTPGTPG 127
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 31.1 bits (67), Expect = 0.60
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGSD 51
PGP+G PG DG PG+D
Sbjct: 242 PGPKGAPGPDGPPGAD 257
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -3
Query: 44 PGRPSIPGTPRGPG 3
PGRP PGTP PG
Sbjct: 114 PGRPGAPGTPGTPG 127
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 31.1 bits (67), Expect = 0.60
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGS 48
PGP+G PG DGLPG+
Sbjct: 224 PGPQGPPGADGLPGN 238
Score = 30.7 bits (66), Expect = 0.80
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGSD 51
PGP G PG DG PG+D
Sbjct: 143 PGPSGAPGTDGNPGND 158
>Z73969-6|CAA98236.1| 295|Caenorhabditis elegans Hypothetical
protein C12D8.8 protein.
Length = 295
Score = 30.7 bits (66), Expect = 0.80
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPGSD 51
+PGP G PGIDG PG +
Sbjct: 227 KPGPSGPPGIDGYPGQN 243
>Z66498-1|CAA91290.1| 304|Caenorhabditis elegans Hypothetical
protein M195.1 protein.
Length = 304
Score = 30.7 bits (66), Expect = 0.80
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGS 48
PGP+G PG DG PGS
Sbjct: 235 PGPQGAPGTDGQPGS 249
>L11247-3|AAA28008.1| 278|Caenorhabditis elegans Collagen protein
91 protein.
Length = 278
Score = 30.7 bits (66), Expect = 0.80
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGSD 51
PGP G PG+DG PG++
Sbjct: 231 PGPAGAPGVDGQPGAN 246
>AF036699-5|AAB88359.1| 290|Caenorhabditis elegans Collagen protein
105 protein.
Length = 290
Score = 30.7 bits (66), Expect = 0.80
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGSD 51
PGP+G PG G+PG+D
Sbjct: 236 PGPKGPPGASGIPGND 251
>AF016687-1|AAC48094.2| 315|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 9 protein.
Length = 315
Score = 30.7 bits (66), Expect = 0.80
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGSD 51
PGPRG PG DG PG D
Sbjct: 96 PGPRGQPGDDGEPGRD 111
>Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical
protein Y69H2.14 protein.
Length = 338
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPGSD 51
+PGP+G PG DG PG D
Sbjct: 289 QPGPQGPPGDDGHPGED 305
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGSD 51
PGP G PG DG PG D
Sbjct: 152 PGPPGFPGSDGQPGRD 167
>Z68113-3|CAA92150.1| 333|Caenorhabditis elegans Hypothetical
protein E03G2.4 protein.
Length = 333
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGSD 51
PGP G PG DG PGSD
Sbjct: 146 PGPPGRPGSDGSPGSD 161
>AF003386-13|AAB54250.1| 311|Caenorhabditis elegans Blistered
cuticle protein 2 protein.
Length = 311
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGS 48
PGP G+PG DGLPG+
Sbjct: 242 PGPPGLPGPDGLPGT 256
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGSD 51
PGP G+PG G PG D
Sbjct: 248 PGPDGLPGTPGNPGQD 263
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGSD 51
PGP+G PG DG PG D
Sbjct: 247 PGPKGAPGPDGPPGVD 262
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -3
Query: 44 PGRPSIPGTPRGPG 3
PGRP PGTP PG
Sbjct: 119 PGRPGAPGTPGTPG 132
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPGSD 51
E GP GVPG +G PG+D
Sbjct: 94 ETGPAGVPGQEGAPGND 110
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPGSD 51
E GP GVPG +G PG+D
Sbjct: 94 ETGPAGVPGQEGAPGND 110
>Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical
protein C36B1.1d protein.
Length = 1175
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPGS 48
EPGP+G G DG+PGS
Sbjct: 708 EPGPQGPSGNDGIPGS 723
>Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPGS 48
EPGP+G G DG+PGS
Sbjct: 311 EPGPQGPSGNDGIPGS 326
>Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical
protein C36B1.1a protein.
Length = 1138
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPGS 48
EPGP+G G DG+PGS
Sbjct: 671 EPGPQGPSGNDGIPGS 686
>Z81079-1|CAB03084.1| 650|Caenorhabditis elegans Hypothetical
protein C36B1.1c protein.
Length = 650
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPGS 48
EPGP+G G DG+PGS
Sbjct: 183 EPGPQGPSGNDGIPGS 198
>Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical
protein C36B1.1d protein.
Length = 1175
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPGS 48
EPGP+G G DG+PGS
Sbjct: 708 EPGPQGPSGNDGIPGS 723
>Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPGS 48
EPGP+G G DG+PGS
Sbjct: 311 EPGPQGPSGNDGIPGS 326
>Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical
protein C36B1.1a protein.
Length = 1138
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPGS 48
EPGP+G G DG+PGS
Sbjct: 671 EPGPQGPSGNDGIPGS 686
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPGSD 51
EPG G PG GLPGSD
Sbjct: 257 EPGQDGAPGQPGLPGSD 273
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGSD 51
PGP G PG G PGS+
Sbjct: 151 PGPPGAPGAPGKPGSE 166
>AF164959-3|AAD47825.1| 650|Caenorhabditis elegans CLE-1C protein
protein.
Length = 650
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPGS 48
EPGP+G G DG+PGS
Sbjct: 183 EPGPQGPSGNDGIPGS 198
>AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protein
protein.
Length = 778
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPGS 48
EPGP+G G DG+PGS
Sbjct: 311 EPGPQGPSGNDGIPGS 326
>AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protein
protein.
Length = 1117
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPGS 48
EPGP+G G DG+PGS
Sbjct: 650 EPGPQGPSGNDGIPGS 665
>AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen
protein 112 protein.
Length = 297
Score = 29.5 bits (63), Expect = 1.8
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPGS 48
+PGP+G PG++G PG+
Sbjct: 180 QPGPKGPPGVNGQPGA 195
>Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical
protein F33A8.9 protein.
Length = 346
Score = 29.1 bits (62), Expect = 2.4
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGSD 51
PGP G+PG+DG G D
Sbjct: 159 PGPPGIPGLDGNDGDD 174
>Z68315-3|CAA92670.1| 430|Caenorhabditis elegans Hypothetical
protein F28C6.3 protein.
Length = 430
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1
Query: 283 REVVPQCEPGHVKLWDGYSLLYIDGNEKAHN 375
R V + GHVK+WDG S ++ ++AH+
Sbjct: 272 RLYVTASKDGHVKIWDGVSNRCVETFKRAHD 302
>Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical
protein C09G5.6 protein.
Length = 948
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGSD 51
PGPRG PG G PG D
Sbjct: 379 PGPRGRPGPPGFPGQD 394
Score = 28.3 bits (60), Expect = 4.2
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGSD 51
PGP G PG+ G+PG D
Sbjct: 493 PGPPGQPGVMGVPGRD 508
Score = 28.3 bits (60), Expect = 4.2
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPGSD 51
+PG GVPG DG PG+D
Sbjct: 498 QPGVMGVPGRDGDPGTD 514
>AF024503-17|AAG24085.1| 354|Caenorhabditis elegans Hypothetical
protein F31F4.1 protein.
Length = 354
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/46 (30%), Positives = 18/46 (39%), Gaps = 2/46 (4%)
Frame = -2
Query: 186 DFSSFTLYSLEALWTRRSWLSLRTREPSVSF--HSWGTIQSWSTRG 55
DF + W R WL+ P + F H W +SW RG
Sbjct: 237 DFGKIRILEKGTSWVRDGWLTKSQWHPGIDFMLHGW---KSWQLRG 279
>Z68005-4|CAA91992.2| 430|Caenorhabditis elegans Hypothetical
protein F59F3.2 protein.
Length = 430
Score = 28.7 bits (61), Expect = 3.2
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGS 48
PGP+G+PG GLPG+
Sbjct: 226 PGPKGLPGSVGLPGA 240
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 28.7 bits (61), Expect = 3.2
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGSD 51
PGP+G PG G PGSD
Sbjct: 261 PGPKGPPGPAGQPGSD 276
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGS 48
PGP G PG DG PG+
Sbjct: 267 PGPAGQPGSDGNPGT 281
>Z66499-3|CAA91300.1| 348|Caenorhabditis elegans Hypothetical
protein T01B7.7 protein.
Length = 348
Score = 28.7 bits (61), Expect = 3.2
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPGSD 51
E GP G PG GLPG D
Sbjct: 307 EDGPEGPPGAPGLPGKD 323
>Z49938-2|CAA90187.1| 306|Caenorhabditis elegans Hypothetical
protein F38A3.1 protein.
Length = 306
Score = 28.7 bits (61), Expect = 3.2
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGSD 51
PGP G PG DG PG D
Sbjct: 200 PGPSGQPGQDGHPGQD 215
>Z27079-4|CAA81591.1| 78|Caenorhabditis elegans Hypothetical
protein T05G5.4 protein.
Length = 78
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 107 GSLVRKDNQDLRVHKASKEYRVNEEKSVL 193
G+L+RK N R+H+ E V E+K +L
Sbjct: 47 GTLIRKQNYRARIHERMVEQPVTEKKELL 75
>M34451-1|AAA28143.1| 348|Caenorhabditis elegans protein (
C.elegans collagen (rol-6) gene, complete cds. ).
Length = 348
Score = 28.7 bits (61), Expect = 3.2
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPGSD 51
E GP G PG GLPG D
Sbjct: 307 EDGPEGPPGAPGLPGKD 323
>AF036699-4|AAB88358.1| 281|Caenorhabditis elegans Collagen protein
104 protein.
Length = 281
Score = 28.7 bits (61), Expect = 3.2
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPG 45
E GP+G+PG DG PG
Sbjct: 94 EAGPQGIPGHDGTPG 108
>Z70681-1|CAA94580.1| 307|Caenorhabditis elegans Hypothetical
protein C30F2.1 protein.
Length = 307
Score = 28.3 bits (60), Expect = 4.2
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPG 45
EPG RG+PG +G+PG
Sbjct: 242 EPGHRGLPGDNGMPG 256
>Z46791-2|CAA86756.1| 283|Caenorhabditis elegans Hypothetical
protein C09G5.3 protein.
Length = 283
Score = 28.3 bits (60), Expect = 4.2
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPGSD 51
EPGP+G G +G PG+D
Sbjct: 250 EPGPQGEQGTEGQPGTD 266
>Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical
protein F17C8.2 protein.
Length = 296
Score = 28.3 bits (60), Expect = 4.2
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGS 48
PGP+G PG DG PG+
Sbjct: 244 PGPQGPPGQDGTPGN 258
>X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein.
Length = 318
Score = 28.3 bits (60), Expect = 4.2
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPGSD 51
EPG +G PGI G PG D
Sbjct: 190 EPGEQGEPGIKGPPGDD 206
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGSD 51
PGP G PG+ G PG D
Sbjct: 100 PGPIGPPGVSGEPGMD 115
>U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protein
73 protein.
Length = 285
Score = 28.3 bits (60), Expect = 4.2
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGS 48
PGP+G PG DG PG+
Sbjct: 240 PGPQGEPGQDGAPGN 254
>U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 7 protein.
Length = 318
Score = 28.3 bits (60), Expect = 4.2
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPGSD 51
EPG +G PGI G PG D
Sbjct: 190 EPGEQGEPGIKGPPGDD 206
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGSD 51
PGP G PG+ G PG D
Sbjct: 100 PGPIGPPGVSGEPGMD 115
>U21318-2|AAC46668.1| 285|Caenorhabditis elegans Collagen protein
75 protein.
Length = 285
Score = 28.3 bits (60), Expect = 4.2
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPGS 48
EPG G+PG GLPGS
Sbjct: 176 EPGSPGLPGFAGLPGS 191
>CU457737-9|CAM36330.1| 281|Caenorhabditis elegans Hypothetical
protein C52D10.13 protein.
Length = 281
Score = 28.3 bits (60), Expect = 4.2
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +1
Query: 7 GPRGVPGIDGLPGSD 51
GP G PG DG PGSD
Sbjct: 95 GPVGAPGDDGAPGSD 109
>AL117195-28|CAB55014.1| 458|Caenorhabditis elegans Hypothetical
protein Y57A10A.11 protein.
Length = 458
Score = 28.3 bits (60), Expect = 4.2
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPGS 48
EPG G PG+DG+PG+
Sbjct: 409 EPGADGEPGMDGVPGN 424
>AF000263-19|AAG00021.1| 321|Caenorhabditis elegans Collagen
protein 56 protein.
Length = 321
Score = 28.3 bits (60), Expect = 4.2
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPGSD 51
+PG G PG DGLPG D
Sbjct: 109 KPGLDGEPGFDGLPGRD 125
>AC024751-11|ABF71718.1| 302|Caenorhabditis elegans Collagen
protein 46 protein.
Length = 302
Score = 28.3 bits (60), Expect = 4.2
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +1
Query: 7 GPRGVPGIDGLPGS 48
GP G+PG DGLPG+
Sbjct: 105 GPPGIPGRDGLPGT 118
>Z75711-2|CAB00033.2| 425|Caenorhabditis elegans Hypothetical
protein K02B12.3 protein.
Length = 425
Score = 27.9 bits (59), Expect = 5.6
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +1
Query: 373 NQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQ 504
NQD+G+ CV KF T +++ C + Y ++ GQ
Sbjct: 61 NQDVGFQSKCVGKFDTGSMATMNMDVACAF-DEISAKYVIAAGQ 103
>Z49907-2|CAA90084.1| 324|Caenorhabditis elegans Hypothetical
protein B0491.2 protein.
Length = 324
Score = 27.9 bits (59), Expect = 5.6
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +1
Query: 4 PGPRGVPGIDGLPG 45
PG GVPG+DG+PG
Sbjct: 138 PGLDGVPGLDGVPG 151
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1
Query: 7 GPRGVPGIDGLPGSD 51
G GVPG+DG+PG D
Sbjct: 133 GVPGVPGLDGVPGLD 147
>U80444-2|AAB37788.1| 305|Caenorhabditis elegans Collagen protein
58 protein.
Length = 305
Score = 27.9 bits (59), Expect = 5.6
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +1
Query: 7 GPRGVPGIDGLPGSD 51
GP GVPGI G PG D
Sbjct: 173 GPPGVPGITGAPGLD 187
Score = 27.5 bits (58), Expect = 7.4
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGS 48
PGPRG PG+ G+ G+
Sbjct: 169 PGPRGPPGVPGITGA 183
Score = 27.1 bits (57), Expect = 9.8
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +1
Query: 4 PGPRGVPGIDGLPG 45
PG G PG+DG+PG
Sbjct: 178 PGITGAPGLDGIPG 191
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGS 48
PGP G PG DG PG+
Sbjct: 205 PGPVGDPGFDGKPGN 219
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 27.9 bits (59), Expect = 5.6
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPGS 48
EPGP+G PG G PG+
Sbjct: 182 EPGPKGPPGPPGAPGA 197
Score = 27.9 bits (59), Expect = 5.6
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPGSD 51
+PGP+G G DG PG+D
Sbjct: 244 QPGPKGPNGPDGQPGAD 260
>U50191-2|AAK31556.2| 335|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 10, isoform a protein.
Length = 335
Score = 27.9 bits (59), Expect = 5.6
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +1
Query: 4 PGPRGVPGIDGLPG 45
PGP G PG+ GLPG
Sbjct: 230 PGPIGAPGMPGLPG 243
>U50191-1|AAO38600.2| 372|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 10, isoform b protein.
Length = 372
Score = 27.9 bits (59), Expect = 5.6
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +1
Query: 4 PGPRGVPGIDGLPG 45
PGP G PG+ GLPG
Sbjct: 267 PGPIGAPGMPGLPG 280
>U23520-6|AAC46553.1| 287|Caenorhabditis elegans Collagen protein
175 protein.
Length = 287
Score = 27.9 bits (59), Expect = 5.6
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGSD 51
PG +G PG+ GLPG D
Sbjct: 104 PGEKGEPGLAGLPGPD 119
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 27.9 bits (59), Expect = 5.6
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPGSD 51
+PGP+G G DG PG+D
Sbjct: 243 QPGPKGPNGPDGQPGAD 259
>L12692-1|AAA17395.2| 356|Caenorhabditis elegans collagen protein.
Length = 356
Score = 27.9 bits (59), Expect = 5.6
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +1
Query: 4 PGPRGVPGIDGLPG 45
PGP G PG+ GLPG
Sbjct: 251 PGPIGAPGMPGLPG 264
>J03146-1|AAA65468.1| 324|Caenorhabditis elegans collagen protein.
Length = 324
Score = 27.9 bits (59), Expect = 5.6
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +1
Query: 4 PGPRGVPGIDGLPG 45
PG GVPG+DG+PG
Sbjct: 138 PGLDGVPGLDGVPG 151
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1
Query: 7 GPRGVPGIDGLPGSD 51
G GVPG+DG+PG D
Sbjct: 133 GVPGVPGLDGVPGLD 147
>AL032634-3|CAE45092.1| 412|Caenorhabditis elegans Hypothetical
protein Y39G8C.4 protein.
Length = 412
Score = 27.9 bits (59), Expect = 5.6
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1
Query: 7 GPRGVPGIDGLPGSD 51
GP G PG+ GLPG D
Sbjct: 102 GPPGSPGVPGLPGED 116
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 27.9 bits (59), Expect = 5.6
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPGS 48
EPGP+G PG G PG+
Sbjct: 182 EPGPKGPPGPPGAPGA 197
Score = 27.9 bits (59), Expect = 5.6
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPGSD 51
+PGP+G G DG PG+D
Sbjct: 244 QPGPKGPNGPDGQPGAD 260
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/18 (66%), Positives = 14/18 (77%), Gaps = 3/18 (16%)
Frame = +1
Query: 4 PGPRGVP---GIDGLPGS 48
PGPRG P G+DGLPG+
Sbjct: 142 PGPRGPPGQAGLDGLPGA 159
>AF038613-11|AAB92054.2| 836|Caenorhabditis elegans Mammalian
elks/cast/erc/rab6 interactingprotein homolog protein 1
protein.
Length = 836
Score = 27.9 bits (59), Expect = 5.6
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = +2
Query: 107 GSLVRKDNQDLRVHKASKEYR--VNEEKSVLLEEMAHLAHQVHH 232
G+L R + +HK +E + E S+ E HL+ Q HH
Sbjct: 636 GTLTRSTSAQNNMHKRIEELEEALRESVSITAEREVHLSQQKHH 679
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 27.9 bits (59), Expect = 5.6
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGS 48
PGP G PG DG PG+
Sbjct: 216 PGPAGNPGTDGAPGN 230
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 7 GPRGVPGIDGLPGSD 51
GP G PG DG PG D
Sbjct: 133 GPAGAPGKDGAPGED 147
>AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen protein
50 protein.
Length = 418
Score = 27.9 bits (59), Expect = 5.6
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 7 GPRGVPGIDGLPGSD 51
GP G PG DG PG D
Sbjct: 280 GPAGAPGTDGAPGPD 294
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGS 48
PGP G PG DG PG+
Sbjct: 257 PGPAGAPGPDGNPGT 271
>Z83228-2|CAB05733.1| 370|Caenorhabditis elegans Hypothetical
protein F52F12.2 protein.
Length = 370
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPGSD 51
E GP G+PG G+PG D
Sbjct: 249 EEGPDGIPGEQGVPGFD 265
>Z81050-3|CAB02849.1| 291|Caenorhabditis elegans Hypothetical
protein C50B6.4 protein.
Length = 291
Score = 27.5 bits (58), Expect = 7.4
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGSD 51
PGP G G DG PGSD
Sbjct: 209 PGPAGPAGQDGQPGSD 224
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGS 48
PGP G PG DG PG+
Sbjct: 256 PGPAGAPGPDGNPGT 270
>U80441-8|AAB37656.1| 284|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 5 protein.
Length = 284
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGSD 51
PGPRG PG +G PG +
Sbjct: 219 PGPRGEPGNNGNPGEE 234
>U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protein
139 protein.
Length = 310
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGS 48
PGP G PG DG PG+
Sbjct: 160 PGPAGEPGHDGAPGA 174
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGSD 51
PGP+G PG G PG D
Sbjct: 193 PGPKGAPGGPGQPGRD 208
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPGSD 51
+PGPRG PG G PG +
Sbjct: 232 QPGPRGPPGQAGSPGGN 248
>L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen
protein.
Length = 308
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 7 GPRGVPGIDGLPGSD 51
GP G PG DG PG D
Sbjct: 120 GPAGAPGKDGAPGED 134
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGSD 51
PGP G PG +G PG D
Sbjct: 173 PGPPGPPGPEGAPGED 188
>AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical
protein Y51H4A.9 protein.
Length = 351
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1
Query: 7 GPRGVPGIDGLPGSD 51
GP G PG DG PG+D
Sbjct: 166 GPPGAPGQDGAPGND 180
>AF106577-5|AAC78192.2| 353|Caenorhabditis elegans Hypothetical
protein F46F5.14 protein.
Length = 353
Score = 27.5 bits (58), Expect = 7.4
Identities = 15/54 (27%), Positives = 20/54 (37%), Gaps = 2/54 (3%)
Frame = -2
Query: 207 AISSSNTDFSSFTLYSLEALWTRRSWLSLRTREPSVSF--HSWGTIQSWSTRGT 52
A+ TDF + W R WL+ P + F H W + Q T T
Sbjct: 229 AMMGVGTDFGKVRILKKGTGWARDGWLTSMMWHPEIDFMIHGWKSNQLKPTPNT 282
>AF068721-4|AAC19260.1| 298|Caenorhabditis elegans Hypothetical
protein ZK1055.2 protein.
Length = 298
Score = 27.5 bits (58), Expect = 7.4
Identities = 14/47 (29%), Positives = 19/47 (40%), Gaps = 2/47 (4%)
Frame = -2
Query: 207 AISSSNTDFSSFTLYSLEALWTRRSWLSLRTREPSVS--FHSWGTIQ 73
AI +TDF + W + WL+ P + FH W T Q
Sbjct: 172 AIFGVSTDFGKVRIMKKGTGWAKDGWLTSMMWHPELDFMFHGWKTNQ 218
>AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen protein
70 protein.
Length = 530
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -3
Query: 44 PGRPSIPGTPRGPG 3
PG P PGTP GPG
Sbjct: 133 PGNPGGPGTPGGPG 146
>AC087081-13|AAK66033.1| 253|Caenorhabditis elegans Hypothetical
protein Y82E9BL.6 protein.
Length = 253
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = -1
Query: 190 YRFLLVHPVFLGSLVDPEVLVVLADQGTLGLLSFLGHHSILEH 62
YR L+ V +++ P V++++ G + +L+F HS+L H
Sbjct: 75 YRILIAGAVVCLNVLFPVVMILMFLGGWMNILAFAVIHSLLVH 117
>AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen protein
108 protein.
Length = 304
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGSD 51
PGP+G PG G PG D
Sbjct: 229 PGPQGPPGAPGQPGHD 244
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1
Query: 7 GPRGVPGIDGLPGSD 51
GP G PG DG PG+D
Sbjct: 128 GPAGPPGADGNPGTD 142
>Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.5 protein.
Length = 316
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGS 48
PGP+G PG G PGS
Sbjct: 212 PGPQGPPGAPGQPGS 226
>Z78201-2|CAB01588.1| 324|Caenorhabditis elegans Hypothetical
protein ZK836.1 protein.
Length = 324
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPGSD 51
E GP G G+DG+PG D
Sbjct: 133 EQGPDGQDGVDGVPGFD 149
>Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical
protein F57B1.4 protein.
Length = 317
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1
Query: 7 GPRGVPGIDGLPGSD 51
GP G PG DG PG+D
Sbjct: 132 GPAGSPGQDGAPGND 146
>Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical
protein F57B1.3 protein.
Length = 313
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1
Query: 7 GPRGVPGIDGLPGSD 51
GP G PG DG PG+D
Sbjct: 128 GPAGSPGQDGAPGND 142
>Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.2 protein.
Length = 316
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1
Query: 7 GPRGVPGIDGLPGSD 51
GP G PG DG PG+D
Sbjct: 131 GPAGSPGQDGAPGND 145
>Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.1 protein.
Length = 316
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1
Query: 7 GPRGVPGIDGLPGSD 51
GP G PG DG PG+D
Sbjct: 131 GPAGSPGQDGAPGND 145
>Z70682-4|CAA94581.1| 299|Caenorhabditis elegans Hypothetical
protein F08G5.4 protein.
Length = 299
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGSD 51
PGP G PG G PG D
Sbjct: 96 PGPPGPPGAPGAPGDD 111
>Z70207-1|CAA94128.1| 291|Caenorhabditis elegans Hypothetical
protein F15A2.1 protein.
Length = 291
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGSD 51
PG G PG+DG PG D
Sbjct: 114 PGLPGAPGVDGKPGVD 129
>Z54237-5|CAN86900.1| 273|Caenorhabditis elegans Hypothetical
protein T11B7.3b protein.
Length = 273
Score = 27.1 bits (57), Expect = 9.8
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGSD 51
PGP+G PG G PG +
Sbjct: 101 PGPQGAPGAPGTPGEN 116
>Z54237-4|CAN86899.1| 297|Caenorhabditis elegans Hypothetical
protein T11B7.3a protein.
Length = 297
Score = 27.1 bits (57), Expect = 9.8
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGSD 51
PGP+G PG G PG +
Sbjct: 101 PGPQGAPGAPGTPGEN 116
>Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical
protein C09G5.5 protein.
Length = 317
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGS 48
PGP+G PG G PGS
Sbjct: 210 PGPQGPPGAPGQPGS 224
>X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1
Query: 7 GPRGVPGIDGLPGSD 51
GP G PG DG PG+D
Sbjct: 131 GPAGSPGQDGAPGND 145
>X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1
Query: 7 GPRGVPGIDGLPGSD 51
GP G PG DG PG+D
Sbjct: 131 GPAGSPGQDGAPGND 145
>U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protein
14 protein.
Length = 345
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPG 45
+ GPRG PGI G PG
Sbjct: 235 DQGPRGPPGIPGAPG 249
>U50191-3|AAK31557.1| 380|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 2 protein.
Length = 380
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGSD 51
PGP G PG G+PG D
Sbjct: 246 PGPWGPPGSAGMPGED 261
>U41748-3|AAA83336.1| 452|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 8 protein.
Length = 452
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +1
Query: 4 PGPRGVPGIDGLPG 45
PGP G PG DG PG
Sbjct: 100 PGPPGAPGPDGQPG 113
>U40187-2|AAA81159.1| 282|Caenorhabditis elegans Collagen protein 8
protein.
Length = 282
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +1
Query: 4 PGPRGVPGIDGLPG 45
PGPRG PG +G PG
Sbjct: 215 PGPRGPPGPEGNPG 228
>U40060-2|AAP82656.1| 108|Caenorhabditis elegans Collagen protein
172, isoform b protein.
Length = 108
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +1
Query: 4 PGPRGVPGIDGLPG 45
PG RG G+DGLPG
Sbjct: 45 PGKRGARGMDGLPG 58
>U40060-1|AAA81141.1| 341|Caenorhabditis elegans Collagen protein
172, isoform a protein.
Length = 341
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +1
Query: 4 PGPRGVPGIDGLPG 45
PG RG G+DGLPG
Sbjct: 278 PGKRGARGMDGLPG 291
>M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein.
Length = 326
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPG 45
+ GPRG PGI G PG
Sbjct: 216 DQGPRGPPGIPGAPG 230
>M25479-1|AAA27993.1| 282|Caenorhabditis elegans collagen protein.
Length = 282
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +1
Query: 4 PGPRGVPGIDGLPG 45
PGPRG PG +G PG
Sbjct: 215 PGPRGPPGPEGNPG 228
>L12706-1|AAA17398.2| 360|Caenorhabditis elegans collagen protein.
Length = 360
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGSD 51
PGP G PG G+PG D
Sbjct: 246 PGPWGPPGSAGMPGED 261
>AF465981-1|AAL76993.1| 324|Caenorhabditis elegans cuticle collagen
LON-3 protein.
Length = 324
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPGSD 51
E GP G G+DG+PG D
Sbjct: 133 EQGPDGQDGVDGVPGFD 149
>AF262406-1|AAL08218.1| 324|Caenorhabditis elegans cuticle collagen
protein LON-3 protein.
Length = 324
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 1 EPGPRGVPGIDGLPGSD 51
E GP G G+DG+PG D
Sbjct: 133 EQGPDGQDGVDGVPGFD 149
>AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen protein
101 protein.
Length = 314
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1
Query: 7 GPRGVPGIDGLPGSD 51
GP G PG DG PG+D
Sbjct: 129 GPAGSPGQDGAPGND 143
>AC024805-16|AAK39336.1| 448|Caenorhabditis elegans Hypothetical
protein Y51H7C.1 protein.
Length = 448
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -3
Query: 44 PGRPSIPGTPRGPG 3
PG P PGTP GPG
Sbjct: 33 PGTPGGPGTPGGPG 46
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -3
Query: 44 PGRPSIPGTPRGPG 3
PG P PGTP GPG
Sbjct: 39 PGTPGGPGTPGGPG 52
>AC024778-1|AAF60567.1| 393|Caenorhabditis elegans Collagen protein
115 protein.
Length = 393
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1
Query: 4 PGPRGVPGIDGLPGS 48
PGP G PG+ G PGS
Sbjct: 281 PGPPGPPGLHGSPGS 295
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,476,120
Number of Sequences: 27780
Number of extensions: 283970
Number of successful extensions: 4217
Number of sequences better than 10.0: 120
Number of HSP's better than 10.0 without gapping: 1020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4176
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1226509528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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