Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_J23
         (586 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            24   0.96 
DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride c...    21   6.7  
DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride c...    21   6.7  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   6.7  
AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl sub...    21   6.7  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   8.9  

>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 24.2 bits (50), Expect = 0.96
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = -3

Query: 428 NGIVLNFRTHEPAYPRSWLCAFSFPSIYN 342
           NG +L+   H+      W+C   +  IYN
Sbjct: 361 NGNILSPSIHDNICSNGWICEHRWRQIYN 389


>DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +1

Query: 4   PGPRGVPGIDG 36
           PGP GVPG  G
Sbjct: 332 PGPPGVPGDHG 342


>DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +1

Query: 4   PGPRGVPGIDG 36
           PGP GVPG  G
Sbjct: 332 PGPPGVPGDHG 342


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +2

Query: 113  LVRKDNQDLRVHKASKEYRVNEEKSVLLEEMAHL 214
            ++  DN  L + K    +R+N E +   EEM  L
Sbjct: 1062 MIPDDNTSLALPKNEGPFRLNVETAKTNEEMWEL 1095


>AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl
           subunit protein.
          Length = 365

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +1

Query: 4   PGPRGVPGIDG 36
           PGP GVPG  G
Sbjct: 271 PGPPGVPGDHG 281


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -3

Query: 440 SQKRNGIVLNFRTHEPAYPRSWLCAFSFPS 351
           SQ + G+    R+ EP Y       FSFP+
Sbjct: 594 SQIQRGVNAAIRSQEPFYITEPHQIFSFPA 623


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,043
Number of Sequences: 438
Number of extensions: 3707
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16993167
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)