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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_J21
         (354 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK097637-1|BAC05127.1|  177|Homo sapiens protein ( Homo sapiens ...    28   7.2  
BC127005-1|AAI27006.1|  823|Homo sapiens egf-like module contain...    28   9.5  
BC127004-1|AAI27005.1|  823|Homo sapiens egf-like module contain...    28   9.5  
BC053933-1|AAH53933.1|  239|Homo sapiens EMR2 protein protein.         28   9.5  
BC034949-1|AAH34949.1|  239|Homo sapiens EMR2 protein protein.         28   9.5  
AL353807-3|CAI13211.2| 2964|Homo sapiens ash1 (absent, small, or...    28   9.5  
AL353807-2|CAI13212.1| 2969|Homo sapiens ash1 (absent, small, or...    28   9.5  
AL139410-7|CAI12716.2| 2964|Homo sapiens ash1 (absent, small, or...    28   9.5  
AL139410-6|CAI12722.1| 2969|Homo sapiens ash1 (absent, small, or...    28   9.5  
AK222891-1|BAD96611.1|  810|Homo sapiens egf-like module contain...    28   9.5  
AF257305-1|AAF68983.1| 2969|Homo sapiens ASH1 protein.                 28   9.5  
AF114491-1|AAF21974.1|  823|Homo sapiens EGF-like module EMR2 pr...    28   9.5  
AC005327-1|AAC27673.1|  287|Homo sapiens CD97_HUMAN, partial CDS...    28   9.5  
AB209068-1|BAD92305.1|  636|Homo sapiens ash1 (absent, small, or...    28   9.5  
AB065931-1|BAC06146.1|  837|Homo sapiens seven transmembrane hel...    28   9.5  
AB037841-1|BAA92658.1| 1349|Homo sapiens KIAA1420 protein protein.     28   9.5  

>AK097637-1|BAC05127.1|  177|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40318 fis, clone TESTI2030556. ).
          Length = 177

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +1

Query: 31  LSCFSSSPYWPWLPQTEF 84
           L+CF   P+WP++PQT F
Sbjct: 72  LACFLQ-PWWPFIPQTRF 88


>BC127005-1|AAI27006.1|  823|Homo sapiens egf-like module
           containing, mucin-like, hormone receptor-like 2 protein.
          Length = 823

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +2

Query: 65  GCRKQSSRGGQ*WCPSDGNSDHVVIANPDPFFS 163
           G   Q SRG   WCP D +  +      +P FS
Sbjct: 20  GAETQDSRGCARWCPQDSSCVNATACRCNPGFS 52


>BC127004-1|AAI27005.1|  823|Homo sapiens egf-like module
           containing, mucin-like, hormone receptor-like 2 protein.
          Length = 823

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +2

Query: 65  GCRKQSSRGGQ*WCPSDGNSDHVVIANPDPFFS 163
           G   Q SRG   WCP D +  +      +P FS
Sbjct: 20  GAETQDSRGCARWCPQDSSCVNATACRCNPGFS 52


>BC053933-1|AAH53933.1|  239|Homo sapiens EMR2 protein protein.
          Length = 239

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +2

Query: 65  GCRKQSSRGGQ*WCPSDGNSDHVVIANPDPFFS 163
           G   Q SRG   WCP D +  +      +P FS
Sbjct: 20  GAETQDSRGCARWCPQDSSCVNATACRCNPGFS 52


>BC034949-1|AAH34949.1|  239|Homo sapiens EMR2 protein protein.
          Length = 239

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +2

Query: 65  GCRKQSSRGGQ*WCPSDGNSDHVVIANPDPFFS 163
           G   Q SRG   WCP D +  +      +P FS
Sbjct: 20  GAETQDSRGCARWCPQDSSCVNATACRCNPGFS 52


>AL353807-3|CAI13211.2| 2964|Homo sapiens ash1 (absent, small, or
            homeotic)-like (Drosophila) protein.
          Length = 2964

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +2

Query: 107  PSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAFVD 226
            PS  +S  ++   P P  SQ S+G SG   P+S+   FV+
Sbjct: 1094 PSSASSSEIL---PSPICSQ-SSGTSGGQSPVSSDAGFVE 1129


>AL353807-2|CAI13212.1| 2969|Homo sapiens ash1 (absent, small, or
            homeotic)-like (Drosophila) protein.
          Length = 2969

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +2

Query: 107  PSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAFVD 226
            PS  +S  ++   P P  SQ S+G SG   P+S+   FV+
Sbjct: 1094 PSSASSSEIL---PSPICSQ-SSGTSGGQSPVSSDAGFVE 1129


>AL139410-7|CAI12716.2| 2964|Homo sapiens ash1 (absent, small, or
            homeotic)-like (Drosophila) protein.
          Length = 2964

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +2

Query: 107  PSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAFVD 226
            PS  +S  ++   P P  SQ S+G SG   P+S+   FV+
Sbjct: 1094 PSSASSSEIL---PSPICSQ-SSGTSGGQSPVSSDAGFVE 1129


>AL139410-6|CAI12722.1| 2969|Homo sapiens ash1 (absent, small, or
            homeotic)-like (Drosophila) protein.
          Length = 2969

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +2

Query: 107  PSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAFVD 226
            PS  +S  ++   P P  SQ S+G SG   P+S+   FV+
Sbjct: 1094 PSSASSSEIL---PSPICSQ-SSGTSGGQSPVSSDAGFVE 1129


>AK222891-1|BAD96611.1|  810|Homo sapiens egf-like module
           containing, mucin-like, hormone receptor-like sequence 2
           isofor protein.
          Length = 810

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +2

Query: 65  GCRKQSSRGGQ*WCPSDGNSDHVVIANPDPFFS 163
           G   Q SRG   WCP D +  +      +P FS
Sbjct: 20  GAETQDSRGCARWCPQDSSCVNATACRCNPGFS 52


>AF257305-1|AAF68983.1| 2969|Homo sapiens ASH1 protein.
          Length = 2969

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +2

Query: 107  PSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAFVD 226
            PS  +S  ++   P P  SQ S+G SG   P+S+   FV+
Sbjct: 1094 PSSASSSEIL---PSPICSQ-SSGTSGGQSPVSSDAGFVE 1129


>AF114491-1|AAF21974.1|  823|Homo sapiens EGF-like module EMR2
           protein.
          Length = 823

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +2

Query: 65  GCRKQSSRGGQ*WCPSDGNSDHVVIANPDPFFS 163
           G   Q SRG   WCP D +  +      +P FS
Sbjct: 20  GAETQDSRGCARWCPQDSSCVNATACRCNPGFS 52


>AC005327-1|AAC27673.1|  287|Homo sapiens CD97_HUMAN, partial CDS
           protein.
          Length = 287

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +2

Query: 65  GCRKQSSRGGQ*WCPSDGNSDHVVIANPDPFFS 163
           G   Q SRG   WCP D +  +      +P FS
Sbjct: 17  GAETQDSRGCARWCPQDSSCVNATACRCNPGFS 49


>AB209068-1|BAD92305.1|  636|Homo sapiens ash1 (absent, small, or
           homeotic)-like variant protein.
          Length = 636

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +2

Query: 107 PSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAFVD 226
           PS  +S  ++   P P  SQ S+G SG   P+S+   FV+
Sbjct: 385 PSSASSSEIL---PSPICSQ-SSGTSGGQSPVSSDAGFVE 420


>AB065931-1|BAC06146.1|  837|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 837

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +2

Query: 65  GCRKQSSRGGQ*WCPSDGNSDHVVIANPDPFFS 163
           G   Q SRG   WCP D +  +      +P FS
Sbjct: 21  GAETQDSRGCARWCPQDSSCVNATACRCNPGFS 53


>AB037841-1|BAA92658.1| 1349|Homo sapiens KIAA1420 protein protein.
          Length = 1349

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +2

Query: 107  PSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAFVD 226
            PS  +S  ++   P P  SQ S+G SG   P+S+   FV+
Sbjct: 1098 PSSASSSEIL---PSPICSQ-SSGTSGGQSPVSSDAGFVE 1133


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,580,631
Number of Sequences: 237096
Number of extensions: 1141237
Number of successful extensions: 2759
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2759
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2075554296
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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