Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_J21
(354 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70756-7|CAA94794.2| 199|Caenorhabditis elegans Hypothetical pr... 29 0.93
Z70756-8|CAA94795.2| 212|Caenorhabditis elegans Hypothetical pr... 28 1.6
AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical... 27 5.0
AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical... 27 5.0
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 26 6.6
AF003386-6|AAK82897.1| 527|Caenorhabditis elegans Hypothetical ... 26 6.6
Z47809-8|CAH10845.1| 968|Caenorhabditis elegans Hypothetical pr... 26 8.7
Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical pr... 26 8.7
Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical pr... 26 8.7
Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical pr... 26 8.7
Z36719-11|CAH04695.1| 968|Caenorhabditis elegans Hypothetical p... 26 8.7
Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical p... 26 8.7
Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical pr... 26 8.7
Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical pr... 26 8.7
U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein. 26 8.7
AF003386-2|AAB54255.1| 527|Caenorhabditis elegans Hypothetical ... 26 8.7
>Z70756-7|CAA94794.2| 199|Caenorhabditis elegans Hypothetical
protein T06E4.8 protein.
Length = 199
Score = 29.1 bits (62), Expect = 0.93
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = +2
Query: 134 VIANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPP 250
V A P P F+ P+ P PI GPAF P P
Sbjct: 110 VFAAPRPVFASPALAPVAPMAPILRGPAFAYAPSPVLAP 148
>Z70756-8|CAA94795.2| 212|Caenorhabditis elegans Hypothetical
protein T06E4.9 protein.
Length = 212
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +2
Query: 134 VIANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPP 250
V A P P F+ P+ P P+ GPAF P P
Sbjct: 123 VFAAPRPVFAAPALAPVAPMAPVLRGPAFAYAPSPVLAP 161
>AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical
protein W02D3.11b protein.
Length = 362
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 146 PDPFFSQPSNGPSGNYEPIS 205
P PF S P P G Y+P S
Sbjct: 219 PPPFASAPQTAPRGAYDPYS 238
>AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical
protein W02D3.11a protein.
Length = 549
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 146 PDPFFSQPSNGPSGNYEPIS 205
P PF S P P G Y+P S
Sbjct: 219 PPPFASAPQTAPRGAYDPYS 238
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 26.2 bits (55), Expect = 6.6
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +2
Query: 149 DPFFSQPSNGPSGNYEPISTGPA 217
DP +QPS GP G + P P+
Sbjct: 306 DPSGAQPSGGPPGPFNPSGAPPS 328
>AF003386-6|AAK82897.1| 527|Caenorhabditis elegans Hypothetical
protein F59E12.4a protein.
Length = 527
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +2
Query: 116 GNSDHVVIANPDPFFSQPSNGPSG 187
GN D VI N DPF S G G
Sbjct: 476 GNDDIPVIPNGDPFSGSSSGGSGG 499
>Z47809-8|CAH10845.1| 968|Caenorhabditis elegans Hypothetical
protein C06C3.1d protein.
Length = 968
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 217 VRRFQSSQLSTRAIRRPSRP 276
+RR+QSS+++ A RR RP
Sbjct: 30 LRRWQSSEMNAEAARRTKRP 49
>Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical
protein C06C3.1c protein.
Length = 1124
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 217 VRRFQSSQLSTRAIRRPSRP 276
+RR+QSS+++ A RR RP
Sbjct: 30 LRRWQSSEMNAEAARRTKRP 49
>Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical
protein C06C3.1b protein.
Length = 1019
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 217 VRRFQSSQLSTRAIRRPSRP 276
+RR+QSS+++ A RR RP
Sbjct: 30 LRRWQSSEMNAEAARRTKRP 49
>Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical
protein C06C3.1a protein.
Length = 1016
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 217 VRRFQSSQLSTRAIRRPSRP 276
+RR+QSS+++ A RR RP
Sbjct: 30 LRRWQSSEMNAEAARRTKRP 49
>Z36719-11|CAH04695.1| 968|Caenorhabditis elegans Hypothetical
protein C06C3.1d protein.
Length = 968
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 217 VRRFQSSQLSTRAIRRPSRP 276
+RR+QSS+++ A RR RP
Sbjct: 30 LRRWQSSEMNAEAARRTKRP 49
>Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical
protein C06C3.1c protein.
Length = 1124
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 217 VRRFQSSQLSTRAIRRPSRP 276
+RR+QSS+++ A RR RP
Sbjct: 30 LRRWQSSEMNAEAARRTKRP 49
>Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical
protein C06C3.1b protein.
Length = 1019
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 217 VRRFQSSQLSTRAIRRPSRP 276
+RR+QSS+++ A RR RP
Sbjct: 30 LRRWQSSEMNAEAARRTKRP 49
>Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical
protein C06C3.1a protein.
Length = 1016
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 217 VRRFQSSQLSTRAIRRPSRP 276
+RR+QSS+++ A RR RP
Sbjct: 30 LRRWQSSEMNAEAARRTKRP 49
>U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein.
Length = 1016
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 217 VRRFQSSQLSTRAIRRPSRP 276
+RR+QSS+++ A RR RP
Sbjct: 30 LRRWQSSEMNAEAARRTKRP 49
>AF003386-2|AAB54255.1| 527|Caenorhabditis elegans Hypothetical
protein F59E12.5a protein.
Length = 527
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +2
Query: 116 GNSDHVVIANPDPFFSQPSNGPSG 187
GN D VI N DPF S G G
Sbjct: 476 GNDDIPVIPNGDPFSGSSSGGSRG 499
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,072,611
Number of Sequences: 27780
Number of extensions: 170987
Number of successful extensions: 492
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 492
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 471339352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -