Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_J21
         (354 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    25   0.35 
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    23   1.4  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    22   1.9  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    21   5.7  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            20   9.9  

>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 24.6 bits (51), Expect = 0.35
 Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
 Frame = -2

Query: 110 MDTTIVHHVNSVCG--SHGQYGEEEKHESFHCRIVS 9
           +DT+ VH ++S+CG  S   Y E  ++     R++S
Sbjct: 271 LDTSKVHIIDSICGIDSKPDYRELTEYSVTSVRLIS 306


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = -2

Query: 353 ENIIRLIITSPSFQIADLYETFTSHHGREG 264
           E   + ++   +F   +LY++    HG+EG
Sbjct: 59  EKTYQCLLCQKAFDQKNLYQSHLRSHGKEG 88


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 46  SSPYWPWLPQTEFTWWTIVVSI 111
           S+P W + P   FTW  I V +
Sbjct: 549 SAPVWRFQPWGPFTWGGIGVVV 570


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 20.6 bits (41), Expect = 5.7
 Identities = 14/56 (25%), Positives = 22/56 (39%)
 Frame = +2

Query: 116 GNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPPERYDDPLARGG 283
           GN+  + I  P P   +         EP +  P ++    P +P  R  +P A  G
Sbjct: 71  GNNRPIYIPQPRPPHPRLRREAESEAEPGNNRPVYIPQPRPPHPRLR-REPEAEPG 125


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 19.8 bits (39), Expect = 9.9
 Identities = 5/5 (100%), Positives = 5/5 (100%)
 Frame = +1

Query: 271 RPWWE 285
           RPWWE
Sbjct: 74  RPWWE 78


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,926
Number of Sequences: 438
Number of extensions: 2222
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8184330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)