Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_J20
         (570 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    30   0.019
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    23   1.6  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    23   2.8  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    22   3.7  
AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    22   3.7  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    21   8.6  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 29.9 bits (64), Expect = 0.019
 Identities = 22/69 (31%), Positives = 33/69 (47%)
 Frame = +2

Query: 95  GWGKNRFGKDDEFAVVLKKIELDMVEHSRCNDLLRYTELGARYNLHSSFVCAGGEEGKDM 274
           GWG   F  +   + +L+K  L+M+    C     Y   G   N+  + +CA  + GKD 
Sbjct: 296 GWGHTSF--NGMLSHILQKTTLNMLTQVEC-----YKYYG---NIMVNAMCAYAK-GKDA 344

Query: 275 CTGDGGGPL 301
           C  D GGP+
Sbjct: 345 CQMDSGGPV 353


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 198 GTPSLAPGITCIAPSSAPEG 257
           GTP    G T I+P ++P+G
Sbjct: 333 GTPGSGDGDTEISPQTSPQG 352


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 258 RREKTCARVMAVVHWLVPSAIT 323
           RR K  A +M V  W++  AIT
Sbjct: 150 RRSKRLAGLMIVAVWVLAGAIT 171


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = -2

Query: 512 SNKRNYR*YGKNTFKRYRK 456
           SN  NY  Y  N +  Y K
Sbjct: 325 SNYNNYNNYNNNNYNNYNK 343


>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 509 NKRNYR*YGKNTFKRYR 459
           N+R YR YGK + +R R
Sbjct: 274 NEREYRKYGKTSKERSR 290


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/25 (28%), Positives = 12/25 (48%)
 Frame = -2

Query: 524 YSICSNKRNYR*YGKNTFKRYRKTF 450
           Y+  +   NY  Y  N +  Y+K +
Sbjct: 329 YNNNNYNNNYNNYNNNNYNNYKKLY 353


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,388
Number of Sequences: 438
Number of extensions: 3278
Number of successful extensions: 20
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16381902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)