Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_J16
         (585 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   3.9  
L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    22   5.1  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   6.7  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   6.7  
DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channe...    21   8.9  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   8.9  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   8.9  

>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = -2

Query: 452 VNPWSIRQVQTNCHPPIDAPSGRSNDIREFTDIDKMMSGL 333
           V P S  ++  N   P+D P   SND+    D   M+  +
Sbjct: 454 VQPTSKGRITLNSKDPLDPPVIWSNDLATEHDRSVMIQAI 493


>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 14/63 (22%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
 Frame = -1

Query: 204 HVDYS-HAHVDSHS-KCQKHGHEQQKRLDMPNTQTTRSNIFNFLY*THGFKCTLCCYRIR 31
           H++Y    H  S   KC+K  +    +  + +   + SN++ +       +C  C Y  +
Sbjct: 3   HLEYHLRNHFGSKPFKCEKCSYSCVNKSMLNSHLKSHSNVYQY-------RCANCTYATK 55

Query: 30  SCH 22
            CH
Sbjct: 56  YCH 58


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = -2

Query: 335 LPPNFLASSPAGTCRTT*PQKNDDKITDCTL 243
           L    L+ S   +C+      ND +  DCTL
Sbjct: 18  LASTILSESAGTSCKWLSEGGNDTRSADCTL 48


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -1

Query: 447 PLEYPTGAN*LPPSY 403
           P  YP+ A  LPPSY
Sbjct: 302 PGVYPSTAGFLPPSY 316


>DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channel
           protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +3

Query: 531 HSLCWWSIRNSSAADRI 581
           H + W S+ N+  +DR+
Sbjct: 18  HLIAWASLENTGISDRL 34


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -2

Query: 128 WTCRIPKP 105
           WTCR P+P
Sbjct: 487 WTCRQPEP 494


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -2

Query: 410 PPIDAPSGRSNDIREFTDIDKMMSGLPPNF 321
           PP  + S   + I +      +MS  PPNF
Sbjct: 355 PPKSSESSTGSSIPKLNLSTALMSQPPPNF 384


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,346
Number of Sequences: 438
Number of extensions: 3498
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16993167
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)