Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_J06
(628 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1410 - 26876243-26876497,26877129-26877239,26877240-268773... 79 2e-15
04_04_1401 + 33279092-33279286,33280223-33280306,33280459-332805... 51 9e-07
02_03_0401 - 18604244-18604303,18605059-18605346,18605459-186055... 40 0.001
02_04_0035 + 19078267-19078479,19078588-19078674,19079792-190798... 40 0.002
02_04_0001 - 18816492-18816741,18816881-18817050,18817244-188173... 33 0.14
12_01_1109 - 11726818-11727719,11728225-11728394,11730407-117304... 29 3.0
05_05_0348 + 24271764-24271898,24273055-24273144,24273205-242733... 28 5.3
03_01_0017 - 148934-148999,149000-149074,149343-149408,149737-14... 28 5.3
07_01_0113 + 840866-841574,841687-842210,842391-842840,843541-84... 28 7.0
01_06_1671 - 39018929-39019027,39019310-39019439,39019529-390196... 28 7.0
01_04_0080 - 15824941-15825120 28 7.0
>08_02_1410 -
26876243-26876497,26877129-26877239,26877240-26877324,
26877620-26877672,26878318-26878440,26878514-26878597,
26878708-26878773,26879512-26879584,26879854-26879888,
26879970-26880212
Length = 375
Score = 79.4 bits (187), Expect = 2e-15
Identities = 38/101 (37%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Frame = +2
Query: 125 LEELASLEKEYNE-DPVYLLKVKDLSSKYKSIRRTRPDGNCFFRAFSYAYLEYLL--TDK 295
+E L++L E+ P+ K+K L +Y ++RRTR DGNCF+R+F ++YLE++L DK
Sbjct: 117 MEPLSTLAAEFQSGSPILQEKIKLLGEQYDALRRTRGDGNCFYRSFMFSYLEHILETQDK 176
Query: 296 EEYNKFHEIAKNSKDILVALGFSQFTVEDFYETFMEVVQRV 418
E + + + K L LG+ +FT EDF+ F++ ++ V
Sbjct: 177 AEVERILKKIEQCKKTLADLGYIEFTFEDFFSIFIDQLESV 217
>04_04_1401 +
33279092-33279286,33280223-33280306,33280459-33280524,
33280945-33281028,33281181-33281246,33281719-33281802,
33281955-33282020,33282323-33282388,33282667-33282726,
33282805-33282888,33282968-33283111,33283552-33283586,
33283694-33283746,33283828-33283928,33284516-33284974
Length = 548
Score = 50.8 bits (116), Expect = 9e-07
Identities = 42/175 (24%), Positives = 81/175 (46%), Gaps = 6/175 (3%)
Frame = +2
Query: 122 DLEELASLEKEYNEDPVYLLKVKDLSSKYKSIRRTRPDGNCFFRAFSYAYLEYLLTDKEE 301
D + + L E+ + + K+ LS KY R DG+CF+RAF ++Y+E ++ +++
Sbjct: 236 DKKPIVDLADEFENNTIKK-KITLLSEKYDFFRPVDRDGSCFYRAFIFSYMERIVAMQDD 294
Query: 302 YNKFHEIAKNSKDI----LVALGFSQFTVEDFYETFMEVVQRVGEQADGTPEMLNAVRTE 469
+ E+++ + I F F + E F++ + EQ E V E
Sbjct: 295 LERIIEVSRIGERIGKYKQAYARFGSFGIPQ--EEFLKALSAF-EQLINLIE--KGVAVE 349
Query: 470 LHDKFNKQGYSDYIVVYLRLITSGQLQTEQDFYQNSI--EGPRTVTEFCRPEVEP 628
+ ++ + + +LR +T ++ T +D Y+ + +V EFC+ EV P
Sbjct: 350 QLYQIDETDITKNSLRFLRFLTEIEICTHEDHYKGFLLTADYSSVFEFCQVEVRP 404
>02_03_0401 -
18604244-18604303,18605059-18605346,18605459-18605562,
18605640-18605686,18605790-18605860,18606482-18606601,
18606686-18606856,18607304-18607393,18608949-18609041,
18609141-18609461
Length = 454
Score = 40.3 bits (90), Expect = 0.001
Identities = 30/132 (22%), Positives = 63/132 (47%), Gaps = 6/132 (4%)
Frame = +2
Query: 161 EDPVYLLKVKDLSSKYKSIRRTRPDGNCFFRAFSYAYLEYLLTD---KEE---YNKFHEI 322
+ P L++K LS Y R D CF+R+F ++YLE ++ +EE +
Sbjct: 188 QQPEVGLRLKYLSHHYSEFRPVHRDEECFYRSFIFSYLEQVVDSIGTREEDRLLAAVRAL 247
Query: 323 AKNSKDILVALGFSQFTVEDFYETFMEVVQRVGEQADGTPEMLNAVRTELHDKFNKQGYS 502
A ++++ A FSQ ++ F +++++ ++ +R ++ + F+ +
Sbjct: 248 ATKAENLQWASEFSQ-----KHKAFERLIEKIKGWKRMQEHPISIIRGKILEFFSSYDTT 302
Query: 503 DYIVVYLRLITS 538
D I +LRL+ +
Sbjct: 303 DDIFAFLRLVAA 314
>02_04_0035 +
19078267-19078479,19078588-19078674,19079792-19079863,
19080338-19080526,19080599-19080718,19081348-19081430,
19081518-19081773,19081878-19082199,19086355-19086548,
19087135-19087227,19089327-19089497,19089580-19089699,
19090303-19090373,19090608-19090675,19091097-19091191
Length = 717
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/56 (32%), Positives = 32/56 (57%)
Frame = +2
Query: 119 GDLEELASLEKEYNEDPVYLLKVKDLSSKYKSIRRTRPDGNCFFRAFSYAYLEYLL 286
GD+ + L K E V ++++ L S Y ++R DG F+R+F ++YLE ++
Sbjct: 137 GDIHNVLRLSKRERES-VIIMRLVPLHSHYSALRPVYRDGESFYRSFIFSYLEQIV 191
Score = 31.9 bits (69), Expect = 0.43
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 194 LSSKYKSIRRTRPDGNCFFRAFSYAYLEYLL 286
L Y R PD CF+R+F ++YLE ++
Sbjct: 574 LDHDYSEFRPVVPDEECFYRSFIFSYLEQVV 604
>02_04_0001 -
18816492-18816741,18816881-18817050,18817244-18817388,
18817495-18817565,18817910-18817993,18818103-18818222,
18818310-18818480,18818955-18819044,18821893-18821985,
18822073-18822405
Length = 508
Score = 33.5 bits (73), Expect = 0.14
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 179 LKVKDLSSKYKSIRRTRPDGNCFFRAFSYAYLE 277
L + L ++Y +R R DG F+R+F ++YLE
Sbjct: 198 LHLAHLDTRYSELRPVRRDGEGFYRSFMFSYLE 230
>12_01_1109 -
11726818-11727719,11728225-11728394,11730407-11730483,
11730559-11730645,11730730-11730816,11731887-11731991,
11732133-11732168,11733636-11733754,11733862-11734067,
11735854-11735906,11735986-11736153,11736507-11736591,
11737845-11738023,11738939-11739070,11739209-11739295,
11739920-11739972,11740820-11740892,11741791-11742442,
11743165-11743229
Length = 1111
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/63 (23%), Positives = 32/63 (50%)
Frame = +2
Query: 374 VEDFYETFMEVVQRVGEQADGTPEMLNAVRTELHDKFNKQGYSDYIVVYLRLITSGQLQT 553
V F++ F+ ++ Q+ E++ + +E D ++ G Y +YL+ I +GQ+
Sbjct: 260 VSSFFQLFLCDIEAAIFQSSLKLEVVRGILSESFDDQSRLGALVYSAIYLKWIYTGQISC 319
Query: 554 EQD 562
+D
Sbjct: 320 FED 322
>05_05_0348 +
24271764-24271898,24273055-24273144,24273205-24273303,
24273725-24273826,24273912-24274088,24274193-24274398,
24274491-24274575,24274641-24274798,24274873-24274948,
24275117-24275245,24275313-24275457,24275561-24275691,
24276183-24276335,24276447-24276636,24277006-24277139,
24277248-24277406,24277659-24277964,24278040-24278216,
24278446-24278529,24278592-24278822,24278913-24279002,
24279090-24279211,24279293-24279448,24279477-24279635,
24279705-24279765,24280004-24280138,24280384-24280471,
24280548-24280620,24280883-24280994,24281691-24281711
Length = 1327
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/41 (34%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +2
Query: 80 EIEKEISETIPLVGDLEE-LASLEKEYNEDPVYLLKVKDLS 199
E KE+ E+ L+ LEE + L++++NE+ L ++K+ S
Sbjct: 426 ESTKEVEESSSLIPQLEEEIPKLQEKFNEEEKVLEQIKENS 466
>03_01_0017 -
148934-148999,149000-149074,149343-149408,149737-149793,
150422-150537,150821-151103,151413-151468,151585-151682,
152233-152291,152747-152818,152892-153077,153303-153305
Length = 378
Score = 28.3 bits (60), Expect = 5.3
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +2
Query: 458 VRTELHDKFNKQGYS-DYIVVYLRLITSGQLQTEQDFYQNSIEGPRT-VTEFCR 613
V L D K+GY DYI Y +++TS L T + + P +TEFCR
Sbjct: 81 VDNSLLDLMEKRGYGEDYINRY-KMMTSAPL-TSVPVWARDFDSPEELITEFCR 132
>07_01_0113 +
840866-841574,841687-842210,842391-842840,843541-843699
Length = 613
Score = 27.9 bits (59), Expect = 7.0
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +2
Query: 5 SSSGFTGKLVDNSINQDELIMKQQREIEKEISETIPLVGDLEELASLEKEYNE 163
S + FTG L NSI + + I P +GDL L SL+ YN+
Sbjct: 30 SYNNFTGAL-PNSIRRFTSLRMLDISSNNLIGSISPGIGDLTSLVSLDLSYND 81
>01_06_1671 -
39018929-39019027,39019310-39019439,39019529-39019637,
39020183-39020216,39020376-39021151,39021328-39021464,
39021732-39021876,39021958-39022341,39022435-39023210,
39023609-39023658,39024213-39024262,39024361-39024455,
39024539-39024797,39024943-39024982
Length = 1027
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = +2
Query: 35 DNSINQDELIMKQQREIEKE---ISETIPLVGDLEELASLEKEYNED 166
D +N E + +Q + EKE + + +GD ++ SL+KEY +D
Sbjct: 736 DKQVNNVEGVTEQLTDNEKETAVVEKATTNMGDSAQVDSLDKEYLQD 782
>01_04_0080 - 15824941-15825120
Length = 59
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 2 SSSSGFTGKLVDNSINQDELIMKQQREIEKE 94
S+ +GFTG L+D S+NQ + + E ++E
Sbjct: 27 SAGAGFTGLLLDGSLNQIQRPAGRDAEADRE 57
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,256,441
Number of Sequences: 37544
Number of extensions: 255440
Number of successful extensions: 657
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 656
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1525730988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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