Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_J06
(628 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81039-6|CAB02772.1| 284|Caenorhabditis elegans Hypothetical pr... 107 8e-24
U64858-2|AAN84866.1| 1310|Caenorhabditis elegans Roller: helical... 31 0.67
U64858-1|AAN84864.1| 2456|Caenorhabditis elegans Roller: helical... 31 0.67
AL032631-11|CAB63341.1| 975|Caenorhabditis elegans Hypothetical... 31 0.67
AC024828-2|AAU87812.1| 462|Caenorhabditis elegans Hypothetical ... 31 0.67
Z74033-4|CAA98471.2| 822|Caenorhabditis elegans Hypothetical pr... 31 0.89
U41009-1|AAA82278.3| 501|Caenorhabditis elegans Hypothetical pr... 31 0.89
AB095019-1|BAC22611.1| 822|Caenorhabditis elegans ubiquitin-spe... 31 0.89
Z68161-11|CAA92300.1| 347|Caenorhabditis elegans Hypothetical p... 30 1.2
Z68159-12|CAA92289.1| 347|Caenorhabditis elegans Hypothetical p... 30 1.2
AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical... 29 2.1
AF067616-2|AAC19188.2| 551|Caenorhabditis elegans Deubiquitylat... 29 2.1
AC006661-10|AAF39887.1| 843|Caenorhabditis elegans Hypothetical... 29 2.7
Z92970-1|CAB07480.1| 488|Caenorhabditis elegans Hypothetical pr... 29 3.6
U64845-2|AAC48031.2| 980|Caenorhabditis elegans Hypothetical pr... 29 3.6
AL021482-3|CAA16340.3| 1499|Caenorhabditis elegans Hypothetical ... 29 3.6
AB072567-1|BAB88817.1| 488|Caenorhabditis elegans ceERp57 protein. 29 3.6
Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical pr... 28 6.3
AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical... 28 6.3
AF067216-6|AAC17522.1| 400|Caenorhabditis elegans Hypothetical ... 27 8.3
>Z81039-6|CAB02772.1| 284|Caenorhabditis elegans Hypothetical
protein C25D7.8 protein.
Length = 284
Score = 107 bits (256), Expect = 8e-24
Identities = 68/206 (33%), Positives = 110/206 (53%), Gaps = 4/206 (1%)
Frame = +2
Query: 23 GKLVDNSINQDELIMKQQ--REIEKEISETIPLVGDLEELASLEKEYNEDP--VYLLKVK 190
G+ + + DE++++ Q + IE E +++PLV L + L EY+ + +L K
Sbjct: 12 GQAAEAVVTDDEIVLQDQQLKTIEDE-QKSVPLVATLAPFSILCAEYDNETSAAFLSKAT 70
Query: 191 DLSSKYKSIRRTRPDGNCFFRAFSYAYLEYLLTDKEEYNKFHEIAKNSKDILVALGFSQF 370
+LS Y IR R DGNCF+RA +E +L D+ KF +++ LV LGF +
Sbjct: 71 ELSEVYGEIRYIRGDGNCFYRAILVGLIEIMLKDRARLEKFIASSRDWTRTLVELGFPDW 130
Query: 371 TVEDFYETFMEVVQRVGEQADGTPEMLNAVRTELHDKFNKQGYSDYIVVYLRLITSGQLQ 550
T DF + F+E ++++ T E AV T L+D G ++YI+++ RLITS L+
Sbjct: 131 TCTDFCDFFIEFLEKI-HSGVHTEE---AVYTILND----DGSANYILMFFRLITSAFLK 182
Query: 551 TEQDFYQNSIEGPRTVTEFCRPEVEP 628
+ Y I+ TV ++C E+EP
Sbjct: 183 QNSEEYAPFIDEGMTVAQYCEQEIEP 208
>U64858-2|AAN84866.1| 1310|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 3, isoform c
protein.
Length = 1310
Score = 31.1 bits (67), Expect = 0.67
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = -2
Query: 201 DDKSLTFNR*TGSSLYSFSKDASSSRSPTS 112
DDK + FN T ++ +S S+D++SSR P S
Sbjct: 1072 DDKPIQFNDGTDNTNFSASQDSTSSREPPS 1101
>U64858-1|AAN84864.1| 2456|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 3, isoform a
protein.
Length = 2456
Score = 31.1 bits (67), Expect = 0.67
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = -2
Query: 201 DDKSLTFNR*TGSSLYSFSKDASSSRSPTS 112
DDK + FN T ++ +S S+D++SSR P S
Sbjct: 2218 DDKPIQFNDGTDNTNFSASQDSTSSREPPS 2247
>AL032631-11|CAB63341.1| 975|Caenorhabditis elegans Hypothetical
protein Y106G6H.12 protein.
Length = 975
Score = 31.1 bits (67), Expect = 0.67
Identities = 23/61 (37%), Positives = 31/61 (50%)
Frame = +2
Query: 143 LEKEYNEDPVYLLKVKDLSSKYKSIRRTRPDGNCFFRAFSYAYLEYLLTDKEEYNKFHEI 322
+EK NE V + K D + K I DGNCF+RA S+ LT ++Y+K I
Sbjct: 695 VEKLENEKSVVMKKF-DRPGRVKGIES---DGNCFYRAISWC-----LTGSQKYHKALRI 745
Query: 323 A 325
A
Sbjct: 746 A 746
>AC024828-2|AAU87812.1| 462|Caenorhabditis elegans Hypothetical
protein Y55F3BL.2 protein.
Length = 462
Score = 31.1 bits (67), Expect = 0.67
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Frame = +2
Query: 194 LSSKYKSIRRTRPDG-NCFFRAFSYAYLEYLLT--DKEEYNKFHEIAKNSKDILVALGFS 364
L SK K+ ++ + G NCFF FS YLE+ + K K I K++ L F+
Sbjct: 2 LFSKKKTNKKLKNSGKNCFFFQFSAKYLEFSVNFPRKNSKKKLETIIFYEKNVEKTLFFT 61
Query: 365 QFTVEDFYETF 397
+ + F E F
Sbjct: 62 KQYFKFFNEKF 72
>Z74033-4|CAA98471.2| 822|Caenorhabditis elegans Hypothetical
protein F38B7.5 protein.
Length = 822
Score = 30.7 bits (66), Expect = 0.89
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +2
Query: 218 RRTRPDGNCFFRAFSYAYLEYLLTDKEEYNKFHE-IAKNSKDILVALGFSQFTVEDFYET 394
R PDGNCF+RA S+ ++ + + F E + K+ K L F ++ + YE
Sbjct: 599 RGITPDGNCFYRAISW----WITGVQSHHMIFREAVGKHLKK--NELMFKKYCHNEIYEK 652
Query: 395 FMEVVQRVG 421
++E R G
Sbjct: 653 YVENAMRDG 661
>U41009-1|AAA82278.3| 501|Caenorhabditis elegans Hypothetical
protein C06E7.2 protein.
Length = 501
Score = 30.7 bits (66), Expect = 0.89
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +2
Query: 29 LVDNSINQDELIMKQQREIEKEISETIPLVGDLEELASLEKEYNE 163
L+ N I DE+ +++ + EKE++E I + EE EK+ E
Sbjct: 399 LISNEIPVDEISKEEEEKAEKELNEIIKELKSDEEAVDGEKDVGE 443
>AB095019-1|BAC22611.1| 822|Caenorhabditis elegans
ubiquitin-specific protease protein.
Length = 822
Score = 30.7 bits (66), Expect = 0.89
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +2
Query: 218 RRTRPDGNCFFRAFSYAYLEYLLTDKEEYNKFHE-IAKNSKDILVALGFSQFTVEDFYET 394
R PDGNCF+RA S+ ++ + + F E + K+ K L F ++ + YE
Sbjct: 599 RGITPDGNCFYRAISW----WITGVQSHHMIFREAVGKHLKK--NELMFKKYCHNEIYEK 652
Query: 395 FMEVVQRVG 421
++E R G
Sbjct: 653 YVENAMRDG 661
>Z68161-11|CAA92300.1| 347|Caenorhabditis elegans Hypothetical
protein F20C5.6 protein.
Length = 347
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 47 NQDELIMKQQREIEKEISETIPLVGDLEELASLEKE 154
NQ+EL+ KQ EIE+ E+ L+ EE+ ++ E
Sbjct: 80 NQEELLKKQSEEIERCKEESRMLIQQKEEMENIHSE 115
>Z68159-12|CAA92289.1| 347|Caenorhabditis elegans Hypothetical
protein F20C5.6 protein.
Length = 347
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 47 NQDELIMKQQREIEKEISETIPLVGDLEELASLEKE 154
NQ+EL+ KQ EIE+ E+ L+ EE+ ++ E
Sbjct: 80 NQEELLKKQSEEIERCKEESRMLIQQKEEMENIHSE 115
>AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical
protein Y51A2D.15 protein.
Length = 1222
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = +2
Query: 35 DNSINQDELIMKQQREIEKEISETIPLVGDLEELASLEKEYNED 166
D N++ I + ++++ ++ISE L +E L+ L + YNE+
Sbjct: 986 DTCHNKNNQIDELKKQLNQKISEVNKLSSKIEALSQLNRTYNEE 1029
>AF067616-2|AAC19188.2| 551|Caenorhabditis elegans Deubiquitylating
with usp/ubp andotu domains protein 2 protein.
Length = 551
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/68 (27%), Positives = 31/68 (45%)
Frame = +2
Query: 218 RRTRPDGNCFFRAFSYAYLEYLLTDKEEYNKFHEIAKNSKDILVALGFSQFTVEDFYETF 397
R+ DGNCF+RA S + LT E ++ A F ++ ++ YE +
Sbjct: 326 RKIEADGNCFYRAVS-----WWLTGVESHHMIFREAVGKHLKKNEPKFKKYCHDEIYEKY 380
Query: 398 MEVVQRVG 421
++ V R G
Sbjct: 381 VDNVMREG 388
>AC006661-10|AAF39887.1| 843|Caenorhabditis elegans Hypothetical
protein H20J04.1 protein.
Length = 843
Score = 29.1 bits (62), Expect = 2.7
Identities = 24/88 (27%), Positives = 35/88 (39%), Gaps = 5/88 (5%)
Frame = +2
Query: 2 SSSSGFTGKL--VDNSINQDELIMKQQREI---EKEISETIPLVGDLEELASLEKEYNED 166
SSS FT L V + +LI ++ E + + +G+L L S KEY
Sbjct: 392 SSSQDFTNSLSTVRRIVEYAKLINTSNPQVTNFENGYIDILNALGNLSSLKSAVKEYRGS 451
Query: 167 PVYLLKVKDLSSKYKSIRRTRPDGNCFF 250
+ S Y S R+ NC+F
Sbjct: 452 DEFTNAASSSVSGYHSRVRSMDKSNCYF 479
>Z92970-1|CAB07480.1| 488|Caenorhabditis elegans Hypothetical
protein H06O01.1 protein.
Length = 488
Score = 28.7 bits (61), Expect = 3.6
Identities = 21/91 (23%), Positives = 39/91 (42%), Gaps = 6/91 (6%)
Frame = +2
Query: 329 NSKDILVALGFSQFTVED------FYETFMEVVQRVGEQADGTPEMLNAVRTELHDKFNK 490
+SK++ F +FT D F+E+ ++ + AD + + T D K
Sbjct: 130 SSKELKTVAEFEKFTGGDENVVIGFFESESKLKDSYLKVADTERDRFSFAHTSNKDIIKK 189
Query: 491 QGYSDYIVVYLRLITSGQLQTEQDFYQNSIE 583
GYSD +VV++ + T + Y + +
Sbjct: 190 AGYSDDVVVFVPKKLHNKFDTNEFKYDGNYD 220
>U64845-2|AAC48031.2| 980|Caenorhabditis elegans Hypothetical
protein F45F2.10 protein.
Length = 980
Score = 28.7 bits (61), Expect = 3.6
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = +2
Query: 5 SSSGFTGKLVDNSINQDELIMKQQREIEKEISETIPLVGDLEELASLEKEYNEDPVYLLK 184
SSS GK N+ Q +L KQ++E+E++ E + G + +KE ++P+ +
Sbjct: 160 SSSKQNGKTAKNNFKQKQLTKKQRKELERKEFE---ISGAPAPIYPGQKERTKNPIEYVV 216
Query: 185 VKD 193
K+
Sbjct: 217 EKE 219
>AL021482-3|CAA16340.3| 1499|Caenorhabditis elegans Hypothetical
protein Y39A1B.3 protein.
Length = 1499
Score = 28.7 bits (61), Expect = 3.6
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +2
Query: 95 ISETIPLVGDLEELASLEKEYNEDPVYLLKVKDLSSKYKSIRRTRPDGNCFFRAFSYAYL 274
+ + L+ D E +A +++ +LKV LS+ Y T+ NC F A S++YL
Sbjct: 249 LDTVVQLLEDPENMARSSQQWISHYFRILKV--LSADYGM---TKDVANCLFTALSHSYL 303
Query: 275 E 277
E
Sbjct: 304 E 304
>AB072567-1|BAB88817.1| 488|Caenorhabditis elegans ceERp57 protein.
Length = 488
Score = 28.7 bits (61), Expect = 3.6
Identities = 21/91 (23%), Positives = 39/91 (42%), Gaps = 6/91 (6%)
Frame = +2
Query: 329 NSKDILVALGFSQFTVED------FYETFMEVVQRVGEQADGTPEMLNAVRTELHDKFNK 490
+SK++ F +FT D F+E+ ++ + AD + + T D K
Sbjct: 130 SSKELKTVAEFEKFTGGDENVVIGFFESESKLKDSYLKVADTERDRFSFAHTSNKDIIKK 189
Query: 491 QGYSDYIVVYLRLITSGQLQTEQDFYQNSIE 583
GYSD +VV++ + T + Y + +
Sbjct: 190 AGYSDDVVVFVPKKLHNKFDTNEFKYDGNYD 220
>Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical
protein F15D4.7 protein.
Length = 2268
Score = 27.9 bits (59), Expect = 6.3
Identities = 24/107 (22%), Positives = 48/107 (44%), Gaps = 2/107 (1%)
Frame = +2
Query: 20 TGKLVDNSINQDEL--IMKQQREIEKEISETIPLVGDLEELASLEKEYNEDPVYLLKVKD 193
T V + NQ +L ++K +I +S+ + + D A +++ YN + +D
Sbjct: 317 TNTTVTHESNQPQLDSVVKTMEQIVLGVSKLVA-INDDSHTAIMQELYNREDQRSQNARD 375
Query: 194 LSSKYKSIRRTRPDGNCFFRAFSYAYLEYLLTDKEEYNKFHEIAKNS 334
K KS T+PD R + + ++E+++ F+E K +
Sbjct: 376 NVIKQKSSEITQPD----IRNIHKLLITFSGEEQEDFDFFYENFKET 418
>AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical
protein F15D4.7 protein.
Length = 2268
Score = 27.9 bits (59), Expect = 6.3
Identities = 24/107 (22%), Positives = 48/107 (44%), Gaps = 2/107 (1%)
Frame = +2
Query: 20 TGKLVDNSINQDEL--IMKQQREIEKEISETIPLVGDLEELASLEKEYNEDPVYLLKVKD 193
T V + NQ +L ++K +I +S+ + + D A +++ YN + +D
Sbjct: 317 TNTTVTHESNQPQLDSVVKTMEQIVLGVSKLVA-INDDSHTAIMQELYNREDQRSQNARD 375
Query: 194 LSSKYKSIRRTRPDGNCFFRAFSYAYLEYLLTDKEEYNKFHEIAKNS 334
K KS T+PD R + + ++E+++ F+E K +
Sbjct: 376 NVIKQKSSEITQPD----IRNIHKLLITFSGEEQEDFDFFYENFKET 418
>AF067216-6|AAC17522.1| 400|Caenorhabditis elegans Hypothetical
protein C35E7.6 protein.
Length = 400
Score = 27.5 bits (58), Expect = 8.3
Identities = 20/85 (23%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
Frame = +2
Query: 89 KEISETIPLVGDLEELASLEKEYNEDPVYLLKVKDLSSKYKSI-----RRTRPDGNCFFR 253
K +++ + +E+L K D + L+K K + + SI ++T G F
Sbjct: 159 KALTQLKDVTAAMEDLTLDSKVMESDLIPLVKEKSVFLPHDSILIAKNKKTNKIGQYVFD 218
Query: 254 AFSYAYLEYLLTDKEEYNKFHEIAK 328
+ + +LE +++D E + IAK
Sbjct: 219 RYHHQFLEVVMSDIEIKQEMPNIAK 243
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,841,308
Number of Sequences: 27780
Number of extensions: 244841
Number of successful extensions: 815
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 812
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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