Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_J06
         (628 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective...    24   1.1  
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    24   1.4  
AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    23   3.2  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    22   5.6  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   5.6  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      22   5.6  

>AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective
           protein-1 protein.
          Length = 128

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 607 ELCNGPRTFNGILVEILFC 551
           ELC GP+ + GI  E + C
Sbjct: 67  ELCGGPQNYLGICAEGMQC 85


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -3

Query: 320 FHGTYCILLYQ*VGTLNMRMRTH 252
           F   YC  +Y  +G L M +RTH
Sbjct: 17  FSCKYCEKVYVSLGALKMHIRTH 39


>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = +2

Query: 62  IMKQQREIEKEISETIPLVGDLEELASLEKEYNEDPV 172
           IMK   E    +   +P  G+L +  S E+   ++P+
Sbjct: 8   IMKPLMEFSATLDTVVPNSGELFKAGSAEQPKEQEPL 44


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +2

Query: 56  ELIMKQQREIEKEISETIPLVGDLEELASLEK 151
           E I +++RE E   + T+P+  D+  +    K
Sbjct: 11  EYIERREREAEHGYASTMPMPDDMRTVTKRPK 42


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = +2

Query: 116 VGDLEELASLEKEYNEDPVYLLKVKDLSSKYKS 214
           + ++E++ + +KE    P YL+K K+   KY +
Sbjct: 243 IWEVEQILA-KKEIKGVPTYLIKWKNWDLKYNT 274


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -2

Query: 141 DASSSRSPTSGIVSEISFSISRCCFM 64
           D +S R+P S +++    + S C +M
Sbjct: 319 DDASERNPRSAVLAAREITSSSCSYM 344


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,830
Number of Sequences: 438
Number of extensions: 3092
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)