Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_J02
(619 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1721 - 39426957-39428005,39428812-39428839 182 2e-46
05_04_0255 + 19462668-19462695,19463443-19464491 178 2e-45
06_03_0718 + 23840198-23840409,23841368-23841518,23842190-238422... 177 6e-45
08_01_0142 - 1121762-1122822,1123087-1123114 173 1e-43
11_01_0448 - 3469398-3469676,3470015-3470284,3470386-3470476,347... 139 1e-33
12_01_0448 + 3537661-3538018,3538920-3539047,3539740-3539763,354... 63 1e-10
07_03_0473 - 18525712-18525858,18526049-18526162,18526442-185265... 32 0.32
06_02_0238 - 13357877-13357954,13358186-13358302,13358537-133586... 32 0.42
12_01_0787 + 7189305-7189464,7189790-7189854 29 2.2
02_03_0183 + 16106205-16106474 28 5.2
07_03_1620 - 28180020-28180862 28 6.8
04_03_0851 + 20285996-20286128,20286217-20286290,20286376-202864... 28 6.8
03_02_0870 + 11964135-11964224,11965013-11965175,11965262-119653... 28 6.8
06_01_0497 + 3555919-3557154,3557815-3558143,3558177-3558775,355... 27 9.0
06_01_0191 + 1478267-1478929,1480579-1480789,1482625-1482925,148... 27 9.0
>01_06_1721 - 39426957-39428005,39428812-39428839
Length = 358
Score = 182 bits (444), Expect = 2e-46
Identities = 93/164 (56%), Positives = 112/164 (68%)
Frame = +1
Query: 1 RAQKVTEVVLAAVYKALSDHHVYLEGTLLKPNMVTAGQSCKKTYTPMDIARATVTALLRT 180
R VTE VLAA YKAL++HHV LEG+LLKPNMVT G KK +P IA TV AL RT
Sbjct: 196 RCAYVTEKVLAACYKALNEHHVLLEGSLLKPNMVTPGSESKKV-SPQLIAEYTVRALQRT 254
Query: 181 VPAAVPGVTFLSGGQSEEEASVNLNAINSVDLKRPWVLTFSYGRALQASVLRAWAGKEDN 360
VPAAVP + FLSGGQSEEEA+VNLNA+N + K+PW L+FS+GRALQ S L+AW GK +N
Sbjct: 255 VPAAVPAIVFLSGGQSEEEATVNLNAMNKLSTKKPWALSFSFGRALQQSTLKAWGGKTEN 314
Query: 361 VPVGQQELIKRAKANGLAATGKYVAGSIPSLASFKSNFVKSHAY 492
V Q+ I R KAN A G Y ++ + +S VK + Y
Sbjct: 315 VVKAQKAFITRCKANSEATLGTYQGDAVLGEGASESLHVKDYKY 358
>05_04_0255 + 19462668-19462695,19463443-19464491
Length = 358
Score = 178 bits (434), Expect = 2e-45
Identities = 89/164 (54%), Positives = 112/164 (68%)
Frame = +1
Query: 1 RAQKVTEVVLAAVYKALSDHHVYLEGTLLKPNMVTAGQSCKKTYTPMDIARATVTALLRT 180
R V+EVVLAA YKAL++HHV LEGTLLKPNMVT G KK +P IA TV L RT
Sbjct: 196 RCAYVSEVVLAACYKALNEHHVLLEGTLLKPNMVTPGSDAKKV-SPEVIAEYTVRTLQRT 254
Query: 181 VPAAVPGVTFLSGGQSEEEASVNLNAINSVDLKRPWVLTFSYGRALQASVLRAWAGKEDN 360
VPAAVP + FLSGGQSEEEA++NLNA+N + K+PW L+FS+GRALQ S L+AW+GK +N
Sbjct: 255 VPAAVPAIVFLSGGQSEEEATLNLNAMNKLSTKKPWSLSFSFGRALQQSTLKAWSGKAEN 314
Query: 361 VPVGQQELIKRAKANGLAATGKYVAGSIPSLASFKSNFVKSHAY 492
+ + + R KAN A G Y ++ + +S VK + Y
Sbjct: 315 IEKARAAFLTRCKANSEATLGTYKGDAVLGEGASESLHVKDYKY 358
>06_03_0718 +
23840198-23840409,23841368-23841518,23842190-23842294,
23843476-23843608,23844164-23844849,23844937-23845299
Length = 549
Score = 177 bits (431), Expect = 6e-45
Identities = 90/160 (56%), Positives = 110/160 (68%)
Frame = +1
Query: 13 VTEVVLAAVYKALSDHHVYLEGTLLKPNMVTAGQSCKKTYTPMDIARATVTALLRTVPAA 192
VTE VLAAVYK+L+DH V LEGTLLKPNMVT G K + I TV AL RTVP A
Sbjct: 392 VTERVLAAVYKSLNDHKVLLEGTLLKPNMVTPGSDSPKVGAEV-IGEYTVAALRRTVPPA 450
Query: 193 VPGVTFLSGGQSEEEASVNLNAINSVDLKRPWVLTFSYGRALQASVLRAWAGKEDNVPVG 372
VPG+ FLSGGQSEEEAS NLNA+N +++ +PW LTFS+GRALQ S ++ W GK++NV
Sbjct: 451 VPGIVFLSGGQSEEEASQNLNAMNKLEVLKPWTLTFSFGRALQQSTIKKWGGKKENVAAA 510
Query: 373 QQELIKRAKANGLAATGKYVAGSIPSLASFKSNFVKSHAY 492
Q + R KAN A GKY G+ A+ +S +VK + Y
Sbjct: 511 QAAFLARCKANSEATLGKY-GGAAGDAATSESLYVKGYTY 549
>08_01_0142 - 1121762-1122822,1123087-1123114
Length = 362
Score = 173 bits (420), Expect = 1e-43
Identities = 92/163 (56%), Positives = 108/163 (66%), Gaps = 2/163 (1%)
Frame = +1
Query: 10 KVTEVVLAAVYKALSDHHVYLEGTLLKPNMVTAGQSCKKTYTPMDIARATVTALLRTVPA 189
+VTE VLAA YKALSDHHV LEGTLLKPNMVT G + P +A TV ALLRTVP
Sbjct: 201 EVTERVLAACYKALSDHHVLLEGTLLKPNMVTPGSDAARA-PPEVVAEHTVRALLRTVPP 259
Query: 190 AVPGVTFLSGGQSEEEASVNLNAINSVDL--KRPWVLTFSYGRALQASVLRAWAGKEDNV 363
AVP + FLSGGQSEEEA+ NLNA+N V K+PW LTFS+GRALQ S L+AWAGK +NV
Sbjct: 260 AVPAIVFLSGGQSEEEATRNLNAMNQVASRGKKPWSLTFSFGRALQQSTLKAWAGKAENV 319
Query: 364 PVGQQELIKRAKANGLAATGKYVAGSIPSLASFKSNFVKSHAY 492
Q L+ R +AN A G Y + ++ VK + Y
Sbjct: 320 GKAQAALLARCRANSQATLGAYAGDAAAGEGVSENLHVKDYKY 362
>11_01_0448 -
3469398-3469676,3470015-3470284,3470386-3470476,
3470581-3470690,3470867-3471136,3471768-3471914
Length = 388
Score = 139 bits (337), Expect = 1e-33
Identities = 73/164 (44%), Positives = 101/164 (61%)
Frame = +1
Query: 1 RAQKVTEVVLAAVYKALSDHHVYLEGTLLKPNMVTAGQSCKKTYTPMDIARATVTALLRT 180
R +V + V A + +++++V EG LLKP+MVT G CK TP ++ T+ L R
Sbjct: 228 RTFEVAQKVWAETFFYMAENNVMFEGILLKPSMVTPGAECKDRATPEQVSDYTLKLLHRR 287
Query: 181 VPAAVPGVTFLSGGQSEEEASVNLNAINSVDLKRPWVLTFSYGRALQASVLRAWAGKEDN 360
+P AVPG+ FLSGGQSE EA+ NLNA+N PW ++FSY RALQ + L+ W G+ +N
Sbjct: 288 IPPAVPGIMFLSGGQSEVEATQNLNAMNQG--PNPWHVSFSYARALQNTCLKTWGGQPEN 345
Query: 361 VPVGQQELIKRAKANGLAATGKYVAGSIPSLASFKSNFVKSHAY 492
V Q L+ RAKAN LA GKY + + A + FVK++ Y
Sbjct: 346 VKAAQDALLLRAKANSLAQLGKYTSDGEAAEAK-EGMFVKNYVY 388
>12_01_0448 +
3537661-3538018,3538920-3539047,3539740-3539763,
3542051-3542317,3542994-3543530
Length = 437
Score = 63.3 bits (147), Expect = 1e-10
Identities = 47/137 (34%), Positives = 67/137 (48%), Gaps = 4/137 (2%)
Frame = +1
Query: 1 RAQKVTEVVLAAVYKALSDHHVYLEGTLLKPNMVTAGQSCKK-TYTPMDIARATVTALLR 177
R +V + V A + +S+++V LEG LLKP+MVT G K TP +A A+ R
Sbjct: 281 RTFEVAQKVWADTFFHMSENNVMLEGILLKPSMVTPGAESKDGAATPEQVAAAS----RR 336
Query: 178 TVPAAVPGVTFLSGGQSEEEASVNLNAIN-SVDLKRPWV--LTFSYGRALQASVLRAWAG 348
PA+ NLNA+N + PW ++FSY RALQ + L+ W
Sbjct: 337 RCPASCSS----PAASRRWRRRGNLNAMNQAAPSANPWRWRVSFSYARALQNTCLKTWGS 392
Query: 349 KEDNVPVGQQELIKRAK 399
+ +NV Q EL A+
Sbjct: 393 RRENVAAAQGELAGAAR 409
>07_03_0473 -
18525712-18525858,18526049-18526162,18526442-18526522,
18526787-18526865,18526902-18526996,18527092-18527170,
18527339-18527450,18527682-18527770,18527868-18527938,
18528846-18528962
Length = 327
Score = 32.3 bits (70), Expect = 0.32
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1
Query: 160 VTALLRTVPAAVPGVTFLSGGQSEEEASVNLNAINS 267
+ AL R + AA+PG+ LS + E+ VNL + N+
Sbjct: 278 IKALFRKIAAALPGMETLSSAKQEDMVDVNLKSSNA 313
>06_02_0238 -
13357877-13357954,13358186-13358302,13358537-13358641,
13359301-13359393,13359801-13359888,13359979-13360028,
13361147-13361205,13361297-13361516,13361611-13361691,
13364034-13364111,13364203-13364298,13364370-13364435
Length = 376
Score = 31.9 bits (69), Expect = 0.42
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = +1
Query: 154 ATVTALLRTVPAAVPGVTFLSGGQSEEEASVNLNAINSVDLKRPWVLTFSYGRALQASV 330
A VTALL +VP + P SGG+ + + LN + +D+ R ++L G ++ V
Sbjct: 131 AAVTALLCSVPISGPSDAASSGGKDKAKKPTRLNIV-GLDITRQFLLHIVSGTDVEKDV 188
>12_01_0787 + 7189305-7189464,7189790-7189854
Length = 74
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +1
Query: 211 LSGGQSEEEASVNLNAINSVDLKRPWVLTFSYGRALQASVLRAWAGKED 357
L G S E+ +V + + DLK +LT Y A+++ AWA E+
Sbjct: 13 LGGSPSLEQPAV-AHPLVVADLKASLLLTVQYNATTTAAIVAAWAADEE 60
>02_03_0183 + 16106205-16106474
Length = 89
Score = 28.3 bits (60), Expect = 5.2
Identities = 21/66 (31%), Positives = 31/66 (46%)
Frame = +3
Query: 18 RSRTGCRIQGTQRPPRLP*GNPSQT*YGYRWSVVQEDLHSNGYRTRHCHRFTQDRTCRCP 197
RSR GC + + PP +P G+P+ R + L S+ H HRF++ C
Sbjct: 24 RSRRGCNEEMSWTPPSVP-GSPAAEGASLRAPTLPPPLASS-----HEHRFSRLHGCLPE 77
Query: 198 WSHFPL 215
S FP+
Sbjct: 78 SSGFPV 83
>07_03_1620 - 28180020-28180862
Length = 280
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 99 GYR-WSVVQEDLHSNGYRTRHCHRFTQDRTCRCPWSH 206
G+R W+ + ED + Y+ + C R + CP++H
Sbjct: 38 GHRLWASMSEDFWIHVYKVQRCPRSSSHDWTSCPYAH 74
>04_03_0851 +
20285996-20286128,20286217-20286290,20286376-20286494,
20287169-20287252,20287974-20288079
Length = 171
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 368 LDSRNSSSVPRRTVSQPPANTSPDLSRRWLL 460
L++ NS V R + S P T+P + +RW L
Sbjct: 140 LEALNSGIVKRGSQSSPVQETTPAVRKRWFL 170
>03_02_0870 +
11964135-11964224,11965013-11965175,11965262-11965380,
11965971-11966083,11966179-11966234,11966320-11966417,
11966588-11966725,11966820-11967125,11967208-11967471,
11967587-11967754,11967838-11968056,11968115-11968158,
11968761-11968830,11968949-11969110,11969672-11969779,
11969873-11969910,11970121-11970265,11970800-11970926,
11971037-11971230,11971529-11971659,11972014-11972089,
11972218-11972328,11972465-11972647,11973264-11973407,
11973946-11973969,11974555-11974728,11974808-11975155,
11975232-11975561,11975776-11975961,11976052-11977026,
11977145-11977399
Length = 1852
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = -2
Query: 330 HGSLESAAVAERQYPGSLQIDRVDSIQVNGSLLFRLATREESDSR 196
HGSL S+AVA++ + Q +S + + FR+ TR E S+
Sbjct: 422 HGSLNSSAVAQKDAHQNGQASNTESGENFQAFDFRMMTRSEPFSQ 466
>06_01_0497 +
3555919-3557154,3557815-3558143,3558177-3558775,
3558919-3560393
Length = 1212
Score = 27.5 bits (58), Expect = 9.0
Identities = 17/73 (23%), Positives = 32/73 (43%)
Frame = +1
Query: 91 PNMVTAGQSCKKTYTPMDIARATVTALLRTVPAAVPGVTFLSGGQSEEEASVNLNAINSV 270
P T G+ C++ + P+D A + + A+ P + F GG + S + +
Sbjct: 590 PRQPTCGRRCRRPWQPVDDEEAPAASRQASSRASRPLLAFSFGGARTQNPS-SCSEEGHG 648
Query: 271 DLKRPWVLTFSYG 309
D + W+L + G
Sbjct: 649 DGRWWWMLALAVG 661
>06_01_0191 +
1478267-1478929,1480579-1480789,1482625-1482925,
1483217-1483612,1483993-1484070,1484166-1484373
Length = 618
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
Frame = +3
Query: 99 GYRWSVVQEDLHSNGYRTRHCHRFTQDRTCRCP---WSHFPLWWP 224
G RWS+ ++ YR RHC + R C P PL WP
Sbjct: 102 GQRWSL-RQPRRRFAYRERHCPPPAERRRCLVPAPRGYRAPLRWP 145
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,948,553
Number of Sequences: 37544
Number of extensions: 322098
Number of successful extensions: 1160
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1152
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1490248872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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